| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338335
Identifier: 146338335
GI number: 146338335
Start: 1324350
End: 1326206
Strand: Direct
Name: 146338335
Synonym: BRADO1243
Alternate gene names: NA
Gene position: 1324350-1326206 (Clockwise)
Preceding gene: 146338334
Following gene: 146338339
Centisome position: 17.76
GC content: 59.77
Gene sequence:
>1857_bases ATGACGAATGTGAGGCGACTGGATCCGCGTGTTGAGACGGCAGCCGCTAGCCGAATCCCGTCGGACTGGCGAGATTCCGA GGAATCTCGAAACTGGCCGGAGACTTTGCATCCGAACGGACCTAACCACCGAGCATTCGTGCTGTTGCAGCCGGGCACAG GCCTGCCGGAGTTTACCGGGCACGCGGTGCAAATTAACGAGAGCGTGTTCATTGTCGAAGCTGATCTGGATACGCTTCGG TGGCTCGCAGAGTACCCGTCGGTTGTCTATGTCGAGGCCCCGAGGCCGATGGGCGAGGACCTTGATACGTCGGTGCCAGC TACCAAAGCCAATGTATTGTCGAGCCCTCCGTCGGGAGGTGCCGCGTTGACGGGCCTCGGCGTAGTGGTCGGCTTTGTCG ATAGAGGTGGAATGGATTGGAAGCTTGAGGATTTCCAAGTCAACGGGCACACCAGGATCCTCGCGATCTGGGACCAGTCC CTTCGCCCCGTCGGGACTGAGAAGTCGCCGGCCGCATACGGCTATGGCGTCGAGTATGACAAGACAACCATCGATGGTGA CTTGGCCGGCGGTCCGCCCCTGCGTCATCGCTGCAATCCGGGATCGCATGCGACTCACGTCGCCGGGATCGCAGTCGGTA ACGGCAGCTCGACCGGCCCCAATCCGGCCGGCGGTGTCTTTCCGGCGGCGAAATATGTCGGGGTAGCGACCAATGCCGAC ATCATCTATGTCGAGGCGGTCAAAATTCCGGGCACCACACTGACCAGCTCTGATCGCGTCGCGGAAGCGATTAAATATAT CTTTGAAAAAGCGGGGAAGCGGCCGTGCGTCGTGAATGTCAGTCTGGGCAACAATGGTGGCGCCCACGACAGCGAAAGCG TGGTGGAACGGACGATTGACCGCATGCTCGAAGCGAACGGACGTGTATTGGTCAAATCGGCGGGAAACGAAGTTGATTGG GACTGCCACGCCGTCGTGGTGCTCACGGCTGGCGATCCACGTTGCACTTTGGAATGGCAGTTTGGTCGAAGCGGGAGGCA TGATCGCACGCCAAACGAATTGGAGCTTTGGTCCTCCTCTCGCGATCGTTTCCGCATCTGGGTCGAGCATCCCCAAGGTT CCAGCCTAGTCACCTCCAAGATCATTCCTGGCGCCGACGACACGCAGCGCTTTCCTTTGGGCAATGAAATCGTGACGGTC TCTTCGCAGCGATTCCATCCGCTCAACGGCGCCAGTTATGTGCACATCCACGTCGATTCAGCCCAGGCGGGCGCGACGCT CTCGAGTGGCGTATGGAAAGTCTGCATTGAGGCCCACGATCCGAGCAACATCAAAGATGGCAGGATCGACGCCTGGATCG AGCGCGATTTGCGGGACGCGGCGAATAATTATGCCGATCAGTCCCTTTTTCGGAATTTCGTTGCAGCCGATGGGACCCTT AACCCTCCAGGTACCATTCGTCGCGGCATTACCGTAGGAAATTACGACCATCTCGGCGGGGCTGGCGTGTCAGCGTCCGG TCGCGGCCCCACCCGCGATGGACGGAACAAGCCAGATCTCGTTGCGCCTGGTTTCAGGGTCTGGTCTTCCGGAGCGCTGG GAAATCAGCCAAACCCGGCTGGCGGTGCCGGGGCCGTATTCGCGGTTCGAGTCGAGAAAACTGGTACGAGCATGAGCGCA CCGCACGTGACCGGCGTTTGCGCGCAGTTGCTGGAAGCTTTCCCAGCTATCAGCTCTGCCCAAATGGGCGCGACACTCGT CGCCGCGGCGTCCGCATTGGCACCATCAACTAGCTTCGATAACCAATTGGGATTTGGCCTGATTGATGCCAAGGAGGCGG ATACAGCGCTCCGCTGA
Upstream 100 bases:
>100_bases GTTGCAACATCCTCGTGTGCCGGCACTCGCGGCGATCGCGGGGAGGCCGCCGGCCGATCCGCTCTGGTCGGTAACCATGC GGGGGTAGACGGGGGACATC
Downstream 100 bases:
>100_bases ATTCTCTAGGCTGCCTAGCGGCTATCGGCGGCAGCCAAATGTAAGGCAGGCATCGTGACTCTATTGAGAACGACCCATCT TGTCACCTCAGTCGGTATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Subtilisin Like Protease; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Peptidase S8 And S; Subtilase; Ser-Type Protease; Serine-Type Protease; Spore-Cortex-Lytic; Germination-Specific Protease; Subtilase Family Domain Protein; DNA/RNA Non-Specific Endonuclease
Number of amino acids: Translated: 618; Mature: 617
Protein sequence:
>618_residues MTNVRRLDPRVETAAASRIPSDWRDSEESRNWPETLHPNGPNHRAFVLLQPGTGLPEFTGHAVQINESVFIVEADLDTLR WLAEYPSVVYVEAPRPMGEDLDTSVPATKANVLSSPPSGGAALTGLGVVVGFVDRGGMDWKLEDFQVNGHTRILAIWDQS LRPVGTEKSPAAYGYGVEYDKTTIDGDLAGGPPLRHRCNPGSHATHVAGIAVGNGSSTGPNPAGGVFPAAKYVGVATNAD IIYVEAVKIPGTTLTSSDRVAEAIKYIFEKAGKRPCVVNVSLGNNGGAHDSESVVERTIDRMLEANGRVLVKSAGNEVDW DCHAVVVLTAGDPRCTLEWQFGRSGRHDRTPNELELWSSSRDRFRIWVEHPQGSSLVTSKIIPGADDTQRFPLGNEIVTV SSQRFHPLNGASYVHIHVDSAQAGATLSSGVWKVCIEAHDPSNIKDGRIDAWIERDLRDAANNYADQSLFRNFVAADGTL NPPGTIRRGITVGNYDHLGGAGVSASGRGPTRDGRNKPDLVAPGFRVWSSGALGNQPNPAGGAGAVFAVRVEKTGTSMSA PHVTGVCAQLLEAFPAISSAQMGATLVAAASALAPSTSFDNQLGFGLIDAKEADTALR
Sequences:
>Translated_618_residues MTNVRRLDPRVETAAASRIPSDWRDSEESRNWPETLHPNGPNHRAFVLLQPGTGLPEFTGHAVQINESVFIVEADLDTLR WLAEYPSVVYVEAPRPMGEDLDTSVPATKANVLSSPPSGGAALTGLGVVVGFVDRGGMDWKLEDFQVNGHTRILAIWDQS LRPVGTEKSPAAYGYGVEYDKTTIDGDLAGGPPLRHRCNPGSHATHVAGIAVGNGSSTGPNPAGGVFPAAKYVGVATNAD IIYVEAVKIPGTTLTSSDRVAEAIKYIFEKAGKRPCVVNVSLGNNGGAHDSESVVERTIDRMLEANGRVLVKSAGNEVDW DCHAVVVLTAGDPRCTLEWQFGRSGRHDRTPNELELWSSSRDRFRIWVEHPQGSSLVTSKIIPGADDTQRFPLGNEIVTV SSQRFHPLNGASYVHIHVDSAQAGATLSSGVWKVCIEAHDPSNIKDGRIDAWIERDLRDAANNYADQSLFRNFVAADGTL NPPGTIRRGITVGNYDHLGGAGVSASGRGPTRDGRNKPDLVAPGFRVWSSGALGNQPNPAGGAGAVFAVRVEKTGTSMSA PHVTGVCAQLLEAFPAISSAQMGATLVAAASALAPSTSFDNQLGFGLIDAKEADTALR >Mature_617_residues TNVRRLDPRVETAAASRIPSDWRDSEESRNWPETLHPNGPNHRAFVLLQPGTGLPEFTGHAVQINESVFIVEADLDTLRW LAEYPSVVYVEAPRPMGEDLDTSVPATKANVLSSPPSGGAALTGLGVVVGFVDRGGMDWKLEDFQVNGHTRILAIWDQSL RPVGTEKSPAAYGYGVEYDKTTIDGDLAGGPPLRHRCNPGSHATHVAGIAVGNGSSTGPNPAGGVFPAAKYVGVATNADI IYVEAVKIPGTTLTSSDRVAEAIKYIFEKAGKRPCVVNVSLGNNGGAHDSESVVERTIDRMLEANGRVLVKSAGNEVDWD CHAVVVLTAGDPRCTLEWQFGRSGRHDRTPNELELWSSSRDRFRIWVEHPQGSSLVTSKIIPGADDTQRFPLGNEIVTVS SQRFHPLNGASYVHIHVDSAQAGATLSSGVWKVCIEAHDPSNIKDGRIDAWIERDLRDAANNYADQSLFRNFVAADGTLN PPGTIRRGITVGNYDHLGGAGVSASGRGPTRDGRNKPDLVAPGFRVWSSGALGNQPNPAGGAGAVFAVRVEKTGTSMSAP HVTGVCAQLLEAFPAISSAQMGATLVAAASALAPSTSFDNQLGFGLIDAKEADTALR
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65633; Mature: 65502
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVRRLDPRVETAAASRIPSDWRDSEESRNWPETLHPNGPNHRAFVLLQPGTGLPEFTG CCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC HAVQINESVFIVEADLDTLRWLAEYPSVVYVEAPRPMGEDLDTSVPATKANVLSSPPSGG CEEEECCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCC AALTGLGVVVGFVDRGGMDWKLEDFQVNGHTRILAIWDQSLRPVGTEKSPAAYGYGVEYD HHHHHHEEEEEHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEECCCCCCC KTTIDGDLAGGPPLRHRCNPGSHATHVAGIAVGNGSSTGPNPAGGVFPAAKYVGVATNAD CEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHEEEEECCCC IIYVEAVKIPGTTLTSSDRVAEAIKYIFEKAGKRPCVVNVSLGNNGGAHDSESVVERTID EEEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHH RMLEANGRVLVKSAGNEVDWDCHAVVVLTAGDPRCTLEWQFGRSGRHDRTPNELELWSSS HHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHCCCC RDRFRIWVEHPQGSSLVTSKIIPGADDTQRFPLGNEIVTVSSQRFHPLNGASYVHIHVDS CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECC AQAGATLSSGVWKVCIEAHDPSNIKDGRIDAWIERDLRDAANNYADQSLFRNFVAADGTL CCCCCCHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NPPGTIRRGITVGNYDHLGGAGVSASGRGPTRDGRNKPDLVAPGFRVWSSGALGNQPNPA CCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHEECCCCCCCCCCCC GGAGAVFAVRVEKTGTSMSAPHVTGVCAQLLEAFPAISSAQMGATLVAAASALAPSTSFD CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCCCCCC NQLGFGLIDAKEADTALR CCCCCCEEECCCCCCCCC >Mature Secondary Structure TNVRRLDPRVETAAASRIPSDWRDSEESRNWPETLHPNGPNHRAFVLLQPGTGLPEFTG CCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC HAVQINESVFIVEADLDTLRWLAEYPSVVYVEAPRPMGEDLDTSVPATKANVLSSPPSGG CEEEECCEEEEEECCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCC AALTGLGVVVGFVDRGGMDWKLEDFQVNGHTRILAIWDQSLRPVGTEKSPAAYGYGVEYD HHHHHHEEEEEHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCEECCCCCCC KTTIDGDLAGGPPLRHRCNPGSHATHVAGIAVGNGSSTGPNPAGGVFPAAKYVGVATNAD CEEECCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHEEEEECCCC IIYVEAVKIPGTTLTSSDRVAEAIKYIFEKAGKRPCVVNVSLGNNGGAHDSESVVERTID EEEEEEEECCCCEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHH RMLEANGRVLVKSAGNEVDWDCHAVVVLTAGDPRCTLEWQFGRSGRHDRTPNELELWSSS HHHHCCCEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEECCCCCCCCCCCCHHHHCCCC RDRFRIWVEHPQGSSLVTSKIIPGADDTQRFPLGNEIVTVSSQRFHPLNGASYVHIHVDS CCEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEECC AQAGATLSSGVWKVCIEAHDPSNIKDGRIDAWIERDLRDAANNYADQSLFRNFVAADGTL CCCCCCHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC NPPGTIRRGITVGNYDHLGGAGVSASGRGPTRDGRNKPDLVAPGFRVWSSGALGNQPNPA CCCCHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHEECCCCCCCCCCCC GGAGAVFAVRVEKTGTSMSAPHVTGVCAQLLEAFPAISSAQMGATLVAAASALAPSTSFD CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCHHCCHHHHHHHHHHCCCCCCC NQLGFGLIDAKEADTALR CCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA