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The map label for this gene is tolB [H]

Identifier: 146338269

GI number: 146338269

Start: 1243463

End: 1244593

Strand: Direct

Name: tolB [H]

Synonym: BRADO1173

Alternate gene names: 146338269

Gene position: 1243463-1244593 (Clockwise)

Preceding gene: 146338268

Following gene: 146338270

Centisome position: 16.68

GC content: 64.63

Gene sequence:

>1131_bases
GTGATCACCAACAATCTGAAACGTAGCGGGTACTTTGCACCGGTTGATCCGGCCGCGTTCCCCGAGCGGATCACCAATTT
CGATCAATTGCCGCAGTTCAACAGTTGGAAGCCGCTCAGCGTCCAGGGGCTGCTGACCGGCCGTGCCACGCGTCAGAGCG
ACGGGAGGCTGAACGTTCAATTCCGGCTGTGGGACGTCAATTCGGGACAGCAATCGGCAGCCCAGCAGTATGTCACTGCG
CCGGAGTACTGGCGGCGTATCGCTCACATCATCTCCGACCAAGTCTATACGGCACTCCTCGGCGAGAAGGGCTATTTCGA
CAGCCGCGTCGTGTTCGTCGACGAGAGCGGGCCGTCGGAGCGCCGCGTCAAGCGGCTGGCGCTGATGGACCAGGACGGCG
CCAATGTCCGCTATCTCACGCGTGGCTCGGATCTCGTGCTGACGCCGCGGTTCTCGCCGTCGAGCCAGGAGATCACCTAT
ATGGAGTTCGGGCAGGGCGACCCGAAGGTCTATCTGTTCAACATCGAGACCGGCCAGCGCGAGATCGTCGGTAATTTTCC
CGGCATGTCGTTCTCGCCGCGCTTCTCCCCGGACGGCCAGCGCATCATCCTGAGCCTGCAGCAGGGCGGCAATTCGAATT
TGTTCGTGATGGATCTGCGCTCGCGCTCGACCACGCGGCTCACCGACACGCCGGCGATCGACACCTCGCCGTGCTACTCG
CCCGACGGCAGCCAGATCTGCTTCGAGAGCGACCGCGGCGGCAAGCCGCAGATCTACGTGATGTCCGCCAGTGGCGGCAA
TGCGCAGCGCATCTCGTTCGGCGAGGGCAGCTACTCGACCCCGGTGTGGTCGCCGCGCGGCGACTACATCGCCTTCACCA
AGCAGGGCGGCGGCCAGTTCGCGATCGGCATCATGAAGACCGACGGCTCGGGCGAGCGCATTTTGACCGCTGGCTTCCAC
AACGAGGGTCCGACCTTCTCGCCCAACGGCCGCGTGCTGATGTTCTTCCGCGATCCCGGCGGCACGGCCGGCCCGTCGCT
CTACACGATCGACGTCTCCGGCCGCTTCGAGCAGAAGGTGCCGACGCCCGGCTACGCGTCGGATCCGGCCTGGTCGCCGC
TGTTGTCGTGA

Upstream 100 bases:

>100_bases
CGTGTCGATCAGCCCTGAATCGAAGCCCATTACGATTGCGATTCCTCCGTTCGTCCCCGGCGGGCCTGGTGACGCCGACG
TCGCTAACGGCATTTCGCAA

Downstream 100 bases:

>100_bases
GCATGAGCGGGCCGGCGACGGCCCGCTAACGCCACGGTGGACGCCAGTTTTTGAGTCGCGCGATACGTGTTCTCCAAAAT
ATTGGAACCATTCGTTGCAG

Product: protein tolB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQFRLWDVNSGQQSAAQQYVTA
PEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSERRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSSQEITY
MEFGQGDPKVYLFNIETGQREIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPCYS
PDGSQICFESDRGGKPQIYVMSASGGNAQRISFGEGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKTDGSGERILTAGFH
NEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKVPTPGYASDPAWSPLLS

Sequences:

>Translated_376_residues
MITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQFRLWDVNSGQQSAAQQYVTA
PEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSERRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSSQEITY
MEFGQGDPKVYLFNIETGQREIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPCYS
PDGSQICFESDRGGKPQIYVMSASGGNAQRISFGEGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKTDGSGERILTAGFH
NEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKVPTPGYASDPAWSPLLS
>Mature_376_residues
MITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQFRLWDVNSGQQSAAQQYVTA
PEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSERRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSSQEITY
MEFGQGDPKVYLFNIETGQREIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPCYS
PDGSQICFESDRGGKPQIYVMSASGGNAQRISFGEGSYSTPVWSPRGDYIAFTKQGGGQFAIGIMKTDGSGERILTAGFH
NEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKVPTPGYASDPAWSPLLS

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0823

COG function: function code U; Periplasmic component of the Tol biopolymer transport system

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tolB family [H]

Homologues:

Organism=Escherichia coli, GI1786961, Length=383, Percent_Identity=30.8093994778068, Blast_Score=187, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011659
- InterPro:   IPR006311
- InterPro:   IPR014167
- InterPro:   IPR007195
- InterPro:   IPR015943 [H]

Pfam domain/function: PF07676 PD40; PF04052 TolB_N [H]

EC number: NA

Molecular weight: Translated: 41482; Mature: 41482

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQ
CCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEE
FRLWDVNSGQQSAAQQYVTAPEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSE
EEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
RRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSSQEITYMEFGQGDPKVYLFNIETGQR
HHHHHHEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCE
EIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPCYS
EEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCC
PDGSQICFESDRGGKPQIYVMSASGGNAQRISFGEGSYSTPVWSPRGDYIAFTKQGGGQF
CCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEE
AIGIMKTDGSGERILTAGFHNEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKV
EEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCC
PTPGYASDPAWSPLLS
CCCCCCCCCCCCCCCC
>Mature Secondary Structure
MITNNLKRSGYFAPVDPAAFPERITNFDQLPQFNSWKPLSVQGLLTGRATRQSDGRLNVQ
CCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCEEEEE
FRLWDVNSGQQSAAQQYVTAPEYWRRIAHIISDQVYTALLGEKGYFDSRVVFVDESGPSE
EEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
RRVKRLALMDQDGANVRYLTRGSDLVLTPRFSPSSQEITYMEFGQGDPKVYLFNIETGQR
HHHHHHEEECCCCCCEEEEECCCCEEEECCCCCCCCEEEEEECCCCCCEEEEEEECCCCE
EIVGNFPGMSFSPRFSPDGQRIILSLQQGGNSNLFVMDLRSRSTTRLTDTPAIDTSPCYS
EEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCC
PDGSQICFESDRGGKPQIYVMSASGGNAQRISFGEGSYSTPVWSPRGDYIAFTKQGGGQF
CCCCEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEE
AIGIMKTDGSGERILTAGFHNEGPTFSPNGRVLMFFRDPGGTAGPSLYTIDVSGRFEQKV
EEEEEEECCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCC
PTPGYASDPAWSPLLS
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA