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The map label for this gene is ymdB [H]

Identifier: 146338235

GI number: 146338235

Start: 1212063

End: 1212887

Strand: Direct

Name: ymdB [H]

Synonym: BRADO1139

Alternate gene names: 146338235

Gene position: 1212063-1212887 (Clockwise)

Preceding gene: 146338234

Following gene: 146338239

Centisome position: 16.25

GC content: 69.33

Gene sequence:

>825_bases
TTGCGAATTCTCTTCGTCGGCGACGTCGTCGGCCGCGCGGGCCGCACCGCCGTCACAGACCACCTTCCAGGCCTGATCCG
CGACTGGCGGCTCGATCTCGTCATCGTCAATGGCGAGAACGCGGCCGGCGGATTCGGCATCACCGAGGCGATCTATCAGG
AGCTGCTCGATGCCGGCGCCGACGCCGTCACGCTCGGCAATCATTCCTGGGACCAGCGCGAGGCGCTGGTGTTCATCGAA
CGGGCGCCGCGCCTGGTGCGGCCCGCGAACTATCCGCCGGGGACGCCCGGCCGGGGCGCGGCGTTGATCGAGACCAAGAC
CGGCGCTCGCGCGCTGGTGGTGAACGTGCTGGGCCGCGTGTTCATGACGCCGTTCGACGATCCGTTCGCGGCCATCGCGC
GTGAGATCGGCGCTTGCCCGCTGCGCGAGGCCGCGGATGCGATCGTGGTCGATGTGCATTGCGAGGCCACCAGCGAGAAG
CAGGGTTTTGGTCATTTCTGCGACGGCCGCGTCAGCCTCGTCGTCGGCACCCACACCCACGTGCCCACGGCCGATCACCA
GATCCTACCCGGCGGCACCGCCTACATGACCGATGCCGGCATGACCGGTGACTACGACTCCATCATCGGCATGCAGAAGG
ACGAGCCGCTGCGCCGCTTCCAGTCGGGGATTCCCTCGGCCCGCTTCGAGCCGGCGATGGGCGAGGCGACCTTGAGCGGC
GTCGCGGTCGAGACCGACGACGCGACGGGCCTGGCGGAGCGGATCGCGCCGGTGCGCCTCGGAGGCCGGCTGTCGCAGGC
GAAGCCGACATTCTGGGGAGCATAG

Upstream 100 bases:

>100_bases
GCCGTGCAGGAAACCGAGGCCATCCCGGCCTTGGCCCACGACGCGGCACTCGATTATGTGCTAACCGAGCGAGAGACCTT
GGATTTCCGGAGCCATTGAG

Downstream 100 bases:

>100_bases
GATCGCAGCCGGGCGGTCAGAAGCCGAAGAATTTCTCGCGCAGCGCGTCCTCATAGGCCGCCTTGGCGTCCTTCACCTTG
CCGCGCACCGCGTCCTCGTC

Product: metallo-phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MRILFVGDVVGRAGRTAVTDHLPGLIRDWRLDLVIVNGENAAGGFGITEAIYQELLDAGADAVTLGNHSWDQREALVFIE
RAPRLVRPANYPPGTPGRGAALIETKTGARALVVNVLGRVFMTPFDDPFAAIAREIGACPLREAADAIVVDVHCEATSEK
QGFGHFCDGRVSLVVGTHTHVPTADHQILPGGTAYMTDAGMTGDYDSIIGMQKDEPLRRFQSGIPSARFEPAMGEATLSG
VAVETDDATGLAERIAPVRLGGRLSQAKPTFWGA

Sequences:

>Translated_274_residues
MRILFVGDVVGRAGRTAVTDHLPGLIRDWRLDLVIVNGENAAGGFGITEAIYQELLDAGADAVTLGNHSWDQREALVFIE
RAPRLVRPANYPPGTPGRGAALIETKTGARALVVNVLGRVFMTPFDDPFAAIAREIGACPLREAADAIVVDVHCEATSEK
QGFGHFCDGRVSLVVGTHTHVPTADHQILPGGTAYMTDAGMTGDYDSIIGMQKDEPLRRFQSGIPSARFEPAMGEATLSG
VAVETDDATGLAERIAPVRLGGRLSQAKPTFWGA
>Mature_274_residues
MRILFVGDVVGRAGRTAVTDHLPGLIRDWRLDLVIVNGENAAGGFGITEAIYQELLDAGADAVTLGNHSWDQREALVFIE
RAPRLVRPANYPPGTPGRGAALIETKTGARALVVNVLGRVFMTPFDDPFAAIAREIGACPLREAADAIVVDVHCEATSEK
QGFGHFCDGRVSLVVGTHTHVPTADHQILPGGTAYMTDAGMTGDYDSIIGMQKDEPLRRFQSGIPSARFEPAMGEATLSG
VAVETDDATGLAERIAPVRLGGRLSQAKPTFWGA

Specific function: Unknown

COG id: COG1692

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005235 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29127; Mature: 29127

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILFVGDVVGRAGRTAVTDHLPGLIRDWRLDLVIVNGENAAGGFGITEAIYQELLDAGA
CEEEEEEHHHCCCCCCHHHHHCCHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DAVTLGNHSWDQREALVFIERAPRLVRPANYPPGTPGRGAALIETKTGARALVVNVLGRV
CEEEECCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
FMTPFDDPFAAIAREIGACPLREAADAIVVDVHCEATSEKQGFGHFCDGRVSLVVGTHTH
HCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC
VPTADHQILPGGTAYMTDAGMTGDYDSIIGMQKDEPLRRFQSGIPSARFEPAMGEATLSG
CCCCCCEECCCCCEEEECCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCC
VAVETDDATGLAERIAPVRLGGRLSQAKPTFWGA
EEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRILFVGDVVGRAGRTAVTDHLPGLIRDWRLDLVIVNGENAAGGFGITEAIYQELLDAGA
CEEEEEEHHHCCCCCCHHHHHCCHHHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCC
DAVTLGNHSWDQREALVFIERAPRLVRPANYPPGTPGRGAALIETKTGARALVVNVLGRV
CEEEECCCCCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHH
FMTPFDDPFAAIAREIGACPLREAADAIVVDVHCEATSEKQGFGHFCDGRVSLVVGTHTH
HCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCC
VPTADHQILPGGTAYMTDAGMTGDYDSIIGMQKDEPLRRFQSGIPSARFEPAMGEATLSG
CCCCCCEECCCCCEEEECCCCCCCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHCC
VAVETDDATGLAERIAPVRLGGRLSQAKPTFWGA
EEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]