Click here to switch to the map view.

The map label for this gene is ytxE [H]

Identifier: 146338211

GI number: 146338211

Start: 1182216

End: 1183244

Strand: Reverse

Name: ytxE [H]

Synonym: BRADO1110

Alternate gene names: 146338211

Gene position: 1183244-1182216 (Counterclockwise)

Preceding gene: 146338212

Following gene: 146338210

Centisome position: 15.87

GC content: 66.08

Gene sequence:

>1029_bases
ATGGCGCTTGCCCGTTCCCGCCGGGGTGACTCTGGCCTGAACTACTGGCCGGGCTTCGTCGACGCGCTGTCGACGCTGGT
CTTGTCGATCGTTTTCCTGCTCACCGTCTTCCTCGTCGTGCAGTTCTTCCTGTCGCAGGAGGTCACCGGCAAGGACAAGG
CGCTGGAGCAGCTCAACGCCAAGATCGCCCAGCTCAACGAGATGCTGTCGTTGGAAAAGCTCGGCAAGCTATCGCTGGAC
GACCAGGTCGCGCAGTTGCGCGCCGGCCTCTCGAATGCCGAGGCGGAGCGCGACCGCATCAAGGGCCTGTATGACGGCCT
CGCCAACGCCGGCAGCAATGCGACCGGCCGAGCCAATGAGCTGAACCGGGCGCTCGAATCCGAGAAGCAGGTCACGGCGC
GGGCGCTGGCGCAGATCGAGGTCCTCAACCAGCAGATCAGTGCGCTGCGCCGCCAGCTCGCGGCGCTCGAGGACGCGCTC
GACGCGTCGGAGAAGCGCGACAAAGAATCGCAGAACCGCATCGCCGATCTCGGCTCGCGCCTGAACGTCGCGCTGGCGCA
GCGGGTGCAGGAGCTGACGCGTTACCGCTCGGAATTTTTCGGCCGGCTACGCGCCATCCTCGGCAACCGCCCCGACATCC
GCGTCGTCGGCGACCGCTTCGTGTTCCAGTCCGAGGTGTTCTTCGACACCGGACAGGCGACGCTGCTCCCGGAAGGACAG
CAGGAGCTGAACTCGGTGGCGACGGCGCTGATCGATCTCGACAAGCAGATCCCGGCGGAAATCTCCTGGGTACTGCGGGT
CGACGGCCACACCGACGTCCGGCCGATCAACAGCCCGGTGTTCAAGTCGAACTGGGAATTGTCGTCGGCGCGCGCCATCT
CGGTGGTACAGTACCTGATCTCGCTCGGCGTCCCCGCGCAGCGGCTCGTCGCCGCCGGCTTCGCCGAATTCCAGCCCCTC
GACACCGCGAACACCGACGAAGCCTTCCGCCGCAACCGCCGCATCGAATTGAAGCTGACGGAGCGGTAG

Upstream 100 bases:

>100_bases
AACCGCGAGATCAAGCGGCTGCTGGAGCGGCTGGCCCGGCAGCCGGAGAAAAGCTAGCGCGCTCTTCGCGCTTGCGTTTG
AAGTTCTGAGGAGACGCTGA

Downstream 100 bases:

>100_bases
TGAGCTTGGTCCGGCTCTCCCAGACGTCATGCCCGGCCTTGTGCCGGGCATCCACGTCGGCCGGCACACAAGGTGCGACG
TGGATGGCCGGGACAAGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MALARSRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNAKIAQLNEMLSLEKLGKLSLD
DQVAQLRAGLSNAEAERDRIKGLYDGLANAGSNATGRANELNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDAL
DASEKRDKESQNRIADLGSRLNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ
QELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLISLGVPAQRLVAAGFAEFQPL
DTANTDEAFRRNRRIELKLTER

Sequences:

>Translated_342_residues
MALARSRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNAKIAQLNEMLSLEKLGKLSLD
DQVAQLRAGLSNAEAERDRIKGLYDGLANAGSNATGRANELNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDAL
DASEKRDKESQNRIADLGSRLNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ
QELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLISLGVPAQRLVAAGFAEFQPL
DTANTDEAFRRNRRIELKLTER
>Mature_341_residues
ALARSRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNAKIAQLNEMLSLEKLGKLSLDD
QVAQLRAGLSNAEAERDRIKGLYDGLANAGSNATGRANELNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDALD
ASEKRDKESQNRIADLGSRLNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQQ
ELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLISLGVPAQRLVAAGFAEFQPLD
TANTDEAFRRNRRIELKLTER

Specific function: May be involved in some transport function [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=130, Percent_Identity=36.9230769230769, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 38021; Mature: 37889

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARSRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KIAQLNEMLSLEKLGKLSLDDQVAQLRAGLSNAEAERDRIKGLYDGLANAGSNATGRANE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNRIADLGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHEECCCEEECCCCH
QELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLI
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SLGVPAQRLVAAGFAEFQPLDTANTDEAFRRNRRIELKLTER
HCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
ALARSRRGDSGLNYWPGFVDALSTLVLSIVFLLTVFLVVQFFLSQEVTGKDKALEQLNA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
KIAQLNEMLSLEKLGKLSLDDQVAQLRAGLSNAEAERDRIKGLYDGLANAGSNATGRANE
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHH
LNRALESEKQVTARALAQIEVLNQQISALRRQLAALEDALDASEKRDKESQNRIADLGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
LNVALAQRVQELTRYRSEFFGRLRAILGNRPDIRVVGDRFVFQSEVFFDTGQATLLPEGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHEECCCEEECCCCH
QELNSVATALIDLDKQIPAEISWVLRVDGHTDVRPINSPVFKSNWELSSARAISVVQYLI
HHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
SLGVPAQRLVAAGFAEFQPLDTANTDEAFRRNRRIELKLTER
HCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934817; 9387221; 9384377 [H]