| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146338212
Identifier: 146338212
GI number: 146338212
Start: 1183288
End: 1184277
Strand: Reverse
Name: 146338212
Synonym: BRADO1111
Alternate gene names: NA
Gene position: 1184277-1183288 (Counterclockwise)
Preceding gene: 146338218
Following gene: 146338211
Centisome position: 15.88
GC content: 67.27
Gene sequence:
>990_bases ATGCCTCAAGGCTCCCCTCCCCGCCCCGCGATGTCAGTCGAACCGACCAAATTGTCGACGCCCCGGATCTTCCTGGTGCG GATGCTGGTCTTCCTGGTGCTGTGCGCCCTGGTCGGGGTCATCCTCTACAAGCAGATCATCATGGCGTTCTTCGCCAATC CGGGCCTCAACGCCCTGATCGGCGCGGTGCTGCTGATCGGCGTGATCCTGGCCTTCCGGCAGATCATCCGGCTGTATCCG GAGGTGTCCTGGGTTAACAATTTCCGCATCGCCGATCCCGGCCTGGCGGTGGCACGCCACCCGACGCTCCTGGCCCCGAT GGCCGCCATTCTCGGCCGCGAGCGCACCGGGCGGATGTCGATCTCGCAGCAGACGATGCGCCATCTGCTCGACTCGATCG CCACCCGTCTGGACGAGGCCCGCGACATCTCGCGCTACATGACCGGCCTGCTGGTCTTCCTCGGCCTGCTCGGCACCTTC TGGGGCCTGATCGAGACGGTCGGCTCGGTCGGCAAGGTCATCGACGGACTGAAGGTCGGCGGCGACGCCGGCGCACTGTT CGACACGCTGAAGGGCGGTCTCGCCGCCCCGCTCAGCGGCATGGGCATTTCGTTCTCGTCCTCGCTGTTCGGCCTCGCCG GCTCGCTGATCCTCGGCTTCCTCGATTTGCAATCAAGCCAGGCACAGAACCGCTTCTATACCGACCTGGAGGACTGGCTC GCGGGCACGGTGCGTGAGTATGGCGGCAGCGGCGACACCAGCGCCGACCTCTCGGTCGCGATCGAGCGGCTGCGCACCGC CATGGAGGAAGGCTCCAACCGCGGCGCCACCGCGGCCATGGCGAACCTCGCCGAGGCGATCCAGGGCCTGGTCGCGCACA TGCGCACCGAGCAGCAGATGATCCGCGAATGGGCGGACGGCCAGGGCGAGCAGAACCGCGAGATCAAGCGGCTGCTGGAG CGGCTGGCCCGGCAGCCGGAGAAAAGCTAG
Upstream 100 bases:
>100_bases CGCAGGGGACGGAGATTGCGCCGATCGCGGCTGTTCTCCGGACCCTGGTATGCCATAGTGGATTTTCGGGACCGGTCCCC CGCAACGGATGTCATCGACA
Downstream 100 bases:
>100_bases CGCGCTCTTCGCGCTTGCGTTTGAAGTTCTGAGGAGACGCTGAATGGCGCTTGCCCGTTCCCGCCGGGGTGACTCTGGCC TGAACTACTGGCCGGGCTTC
Product: putative biopolymer transport exbB protein membrane protein
Products: NA
Alternate protein names: MotA/lQ/ExbB Proton Channel Family; Transmembrane Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MPQGSPPRPAMSVEPTKLSTPRIFLVRMLVFLVLCALVGVILYKQIIMAFFANPGLNALIGAVLLIGVILAFRQIIRLYP EVSWVNNFRIADPGLAVARHPTLLAPMAAILGRERTGRMSISQQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF WGLIETVGSVGKVIDGLKVGGDAGALFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWL AGTVREYGGSGDTSADLSVAIERLRTAMEEGSNRGATAAMANLAEAIQGLVAHMRTEQQMIREWADGQGEQNREIKRLLE RLARQPEKS
Sequences:
>Translated_329_residues MPQGSPPRPAMSVEPTKLSTPRIFLVRMLVFLVLCALVGVILYKQIIMAFFANPGLNALIGAVLLIGVILAFRQIIRLYP EVSWVNNFRIADPGLAVARHPTLLAPMAAILGRERTGRMSISQQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTF WGLIETVGSVGKVIDGLKVGGDAGALFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWL AGTVREYGGSGDTSADLSVAIERLRTAMEEGSNRGATAAMANLAEAIQGLVAHMRTEQQMIREWADGQGEQNREIKRLLE RLARQPEKS >Mature_328_residues PQGSPPRPAMSVEPTKLSTPRIFLVRMLVFLVLCALVGVILYKQIIMAFFANPGLNALIGAVLLIGVILAFRQIIRLYPE VSWVNNFRIADPGLAVARHPTLLAPMAAILGRERTGRMSISQQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFW GLIETVGSVGKVIDGLKVGGDAGALFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWLA GTVREYGGSGDTSADLSVAIERLRTAMEEGSNRGATAAMANLAEAIQGLVAHMRTEQQMIREWADGQGEQNREIKRLLER LARQPEKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35643; Mature: 35512
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQGSPPRPAMSVEPTKLSTPRIFLVRMLVFLVLCALVGVILYKQIIMAFFANPGLNALI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GAVLLIGVILAFRQIIRLYPEVSWVNNFRIADPGLAVARHPTLLAPMAAILGRERTGRMS HHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCHHHCCCHHHHHHHHHHCCCCCCCCH ISQQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDAGALFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWL CCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTVREYGGSGDTSADLSVAIERLRTAMEEGSNRGATAAMANLAEAIQGLVAHMRTEQQM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IREWADGQGEQNREIKRLLERLARQPEKS HHHHHCCCCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure PQGSPPRPAMSVEPTKLSTPRIFLVRMLVFLVLCALVGVILYKQIIMAFFANPGLNALI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH GAVLLIGVILAFRQIIRLYPEVSWVNNFRIADPGLAVARHPTLLAPMAAILGRERTGRMS HHHHHHHHHHHHHHHHHHCCCHHHHCCCEECCCCCHHHCCCHHHHHHHHHHCCCCCCCCH ISQQTMRHLLDSIATRLDEARDISRYMTGLLVFLGLLGTFWGLIETVGSVGKVIDGLKVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDAGALFDTLKGGLAAPLSGMGISFSSSLFGLAGSLILGFLDLQSSQAQNRFYTDLEDWL CCHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGTVREYGGSGDTSADLSVAIERLRTAMEEGSNRGATAAMANLAEAIQGLVAHMRTEQQM HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IREWADGQGEQNREIKRLLERLARQPEKS HHHHHCCCCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA