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The map label for this gene is oppC [H]

Identifier: 146338197

GI number: 146338197

Start: 1165195

End: 1166127

Strand: Direct

Name: oppC [H]

Synonym: BRADO1095

Alternate gene names: 146338197

Gene position: 1165195-1166127 (Clockwise)

Preceding gene: 146338196

Following gene: 146338198

Centisome position: 15.63

GC content: 67.31

Gene sequence:

>933_bases
TTGACCCACGCATCTCCTTCCGTTGAAGCGGCGGTCGCGCCGGCTTCGAAAAAGCGCCGCTTCTCGCCCGGGCGCGATGC
GGTCCGACGCTTCCTGCGCCACCGCCTCGCGGCCGTCAGCATCGTCGTGCTGGCGCTGCTGGCGCTCGCCATCATCGTCG
GCCCGTGGATCTGGCGGGTGCCGATCAACGAGATCGACTTCACCGCGCGTCTCGCGCCGCCGTCCTGGGAGCATCCGTTC
GGCACCGACGATCTCGGCCAGGATCTTCTGTCGCGCATGATCTATGGCGGGCGCATCTCGCTCGCGGTCGGTTTCGCCGC
GATGGCGGTCGGCCTGTTCGTCGGCGTCGTCATCGGCGCTGTCGCCGGCAACTCGAAAGGCCCGGTCGATGCCGCGCTGA
TGTGGCTGACCGACCTGTTCCTGTCGCTGCCGCAGCTGCCCTTGCTGCTGCTCGTGATCTATCTGTTCCGCGATCTCTTG
AAGGGGATCGTCGGCCCGGAAGGCGGCACCTTCGTGCTGATCGTGCTCGTCATCGGCGGCTTTCGCTGGATGCCGGTGGC
GCGCCTGGTGCGCGCGCAGTTCCTGTCACTGCGCGAGAAGGAGTTCGTCGAGGCCGCCCGCGCGCTCGGCGCCTCCAACC
TCCGCCTCGTCGTCCGCCACATCCTGCCGAACGCGCTGGGACCGGTGATCGTCGCCGGCACGATCGACGTCGCTGCGGCG
ATCATCGCGGAATCGACGCTGTCGTTCCTCGGCCTCGGTTTCCCGCCGGACATTCCGACCTGGGGACGGCTGTTGTTCGA
CGCCAAGGACTATCTCGACATCGCGCCGCATTGGGCGCTGTTCGCCGGCGGCGCGATCTTCCTGACCGTCATCGCGATCA
ACTTCATCGGTGATGGCCTGCGCGATGCACTCGATCCGCGGAAGGTGATGTGA

Upstream 100 bases:

>100_bases
ATCCTCGCCAACGATACGCCCGTCATCATGGCGGTGACCTTCGTGTTCGCCTGCCTCGTCGTCCTGTTCAACCTCATCGC
CGATATTCTGTATGGCTGGC

Downstream 100 bases:

>100_bases
TGGACGCGCGCGTCGCTCCGCTCCTCGAGATCAAGGGGCTGAAGACCTATTTCAACAGCGACGAGGGCCAGGTTCAGGCC
GTCGACGGTGTCGACATCTC

Product: oligopeptide ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MTHASPSVEAAVAPASKKRRFSPGRDAVRRFLRHRLAAVSIVVLALLALAIIVGPWIWRVPINEIDFTARLAPPSWEHPF
GTDDLGQDLLSRMIYGGRISLAVGFAAMAVGLFVGVVIGAVAGNSKGPVDAALMWLTDLFLSLPQLPLLLLVIYLFRDLL
KGIVGPEGGTFVLIVLVIGGFRWMPVARLVRAQFLSLREKEFVEAARALGASNLRLVVRHILPNALGPVIVAGTIDVAAA
IIAESTLSFLGLGFPPDIPTWGRLLFDAKDYLDIAPHWALFAGGAIFLTVIAINFIGDGLRDALDPRKVM

Sequences:

>Translated_310_residues
MTHASPSVEAAVAPASKKRRFSPGRDAVRRFLRHRLAAVSIVVLALLALAIIVGPWIWRVPINEIDFTARLAPPSWEHPF
GTDDLGQDLLSRMIYGGRISLAVGFAAMAVGLFVGVVIGAVAGNSKGPVDAALMWLTDLFLSLPQLPLLLLVIYLFRDLL
KGIVGPEGGTFVLIVLVIGGFRWMPVARLVRAQFLSLREKEFVEAARALGASNLRLVVRHILPNALGPVIVAGTIDVAAA
IIAESTLSFLGLGFPPDIPTWGRLLFDAKDYLDIAPHWALFAGGAIFLTVIAINFIGDGLRDALDPRKVM
>Mature_309_residues
THASPSVEAAVAPASKKRRFSPGRDAVRRFLRHRLAAVSIVVLALLALAIIVGPWIWRVPINEIDFTARLAPPSWEHPFG
TDDLGQDLLSRMIYGGRISLAVGFAAMAVGLFVGVVIGAVAGNSKGPVDAALMWLTDLFLSLPQLPLLLLVIYLFRDLLK
GIVGPEGGTFVLIVLVIGGFRWMPVARLVRAQFLSLREKEFVEAARALGASNLRLVVRHILPNALGPVIVAGTIDVAAAI
IAESTLSFLGLGFPPDIPTWGRLLFDAKDYLDIAPHWALFAGGAIFLTVIAINFIGDGLRDALDPRKVM

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=289, Percent_Identity=36.6782006920415, Blast_Score=179, Evalue=2e-46,
Organism=Escherichia coli, GI1787498, Length=285, Percent_Identity=41.4035087719298, Blast_Score=178, Evalue=4e-46,
Organism=Escherichia coli, GI1787760, Length=301, Percent_Identity=34.8837209302326, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1789889, Length=254, Percent_Identity=35.4330708661417, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1789964, Length=258, Percent_Identity=38.7596899224806, Blast_Score=132, Evalue=4e-32,
Organism=Escherichia coli, GI1788505, Length=237, Percent_Identity=33.7552742616034, Blast_Score=121, Evalue=7e-29,
Organism=Escherichia coli, GI1787549, Length=299, Percent_Identity=31.1036789297659, Blast_Score=116, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33390; Mature: 33259

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHASPSVEAAVAPASKKRRFSPGRDAVRRFLRHRLAAVSIVVLALLALAIIVGPWIWRV
CCCCCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEC
PINEIDFTARLAPPSWEHPFGTDDLGQDLLSRMIYGGRISLAVGFAAMAVGLFVGVVIGA
CCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
VAGNSKGPVDAALMWLTDLFLSLPQLPLLLLVIYLFRDLLKGIVGPEGGTFVLIVLVIGG
HCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
FRWMPVARLVRAQFLSLREKEFVEAARALGASNLRLVVRHILPNALGPVIVAGTIDVAAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHH
IIAESTLSFLGLGFPPDIPTWGRLLFDAKDYLDIAPHWALFAGGAIFLTVIAINFIGDGL
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
RDALDPRKVM
HHHCCCCCCC
>Mature Secondary Structure 
THASPSVEAAVAPASKKRRFSPGRDAVRRFLRHRLAAVSIVVLALLALAIIVGPWIWRV
CCCCCCCHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEC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HHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]