BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is fabG [H]

Identifier: 146338187

GI number: 146338187

Start: 1152524

End: 1153258

Strand: Direct

Name: fabG [H]

Synonym: BRADO1085

Alternate gene names: 146338187

Gene position: 1152524-1153258 (Clockwise)

Preceding gene: 146338186

Following gene: 146338188

Centisome position: 15.46

GC content: 65.58

Gene sequence:

>735_bases
ATGAACGCGCTGGATTTCTCAGGGCGACGGGTGCTGGTGATCGGCGGCTCCAGCGGCATCGGTAACGGCATCGCGCAGGC
GTTCCGCGCGCAAGGCGCCCGCGTCGCGATTTGCGGCACGCGGACCCGTGCGGCCGACTACCGCGCCGAGGATGGTTCCG
ATCTCGAGGGCCTCGACTATCATCAACTCGACGTCAGCAACGCCGCAGCCATCGAAGCGTTCGCGCCGGGCCTCGACCGG
CTCGACGTGCTGGTGCTGGCCCAGGGCGCGGTGCTGTATCGCCGCGGCGAGTTCGCGATGGACGGCTTCCGCAAGGTGAT
GGAGGTCAATCTCATCAGCCTGATGGCCTGCGCGACGAAGTTTCACGGCCTGCTGTGTGATACCAAGGGTGCGCTGATCA
TCGTGTCGTCGACGGCGGCGTATCATTCGACGATGGGCAATCCCGCTTACAATGCCTCCAAGACCGGAGCCGTCGGGCTG
ACGCGGACGCTGGCGGAGGCGTGGGCCGGTGACGGCATTCGCGTCAACGGTATCGCGCCGGGTCTGGTCGATACCAAGAT
GACCAAGGTGACGACCGCCAATCCGCAGCGCCTCGAAGGCGCCCTGCAGCGGATTCCGCTGAAGCGGCTCGGTACGCCGC
AGGACATGGCCGGTGCGGCCTTGTTTCTCGCCTCACCGCTGTCGTCCTACATCATCGGCCAGACCATCGTTGTCGATGGC
GGGCTGATTTTGTAG

Upstream 100 bases:

>100_bases
CGGGGTCTGCAGCGCGTCGGCGCAAGCCGCGGCCGCGTTGACAGCGTGGGGTCTGCTCTCCACGCACGTCGAAACAAACA
ACAAGACGAGGGCAGGGGAG

Downstream 100 bases:

>100_bases
TTCGTCGGAACCGTCGCCGCCCGAGCCAGTTAGCAGAGCGGAAAGCCCCGCAAACGCGAGACAAGGAGAGGCGGCGATGG
ATACGGATCGGTTGACCGGA

Product: putative 3-oxoacyl-acyl carrier protein reductase

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MNALDFSGRRVLVIGGSSGIGNGIAQAFRAQGARVAICGTRTRAADYRAEDGSDLEGLDYHQLDVSNAAAIEAFAPGLDR
LDVLVLAQGAVLYRRGEFAMDGFRKVMEVNLISLMACATKFHGLLCDTKGALIIVSSTAAYHSTMGNPAYNASKTGAVGL
TRTLAEAWAGDGIRVNGIAPGLVDTKMTKVTTANPQRLEGALQRIPLKRLGTPQDMAGAALFLASPLSSYIIGQTIVVDG
GLIL

Sequences:

>Translated_244_residues
MNALDFSGRRVLVIGGSSGIGNGIAQAFRAQGARVAICGTRTRAADYRAEDGSDLEGLDYHQLDVSNAAAIEAFAPGLDR
LDVLVLAQGAVLYRRGEFAMDGFRKVMEVNLISLMACATKFHGLLCDTKGALIIVSSTAAYHSTMGNPAYNASKTGAVGL
TRTLAEAWAGDGIRVNGIAPGLVDTKMTKVTTANPQRLEGALQRIPLKRLGTPQDMAGAALFLASPLSSYIIGQTIVVDG
GLIL
>Mature_244_residues
MNALDFSGRRVLVIGGSSGIGNGIAQAFRAQGARVAICGTRTRAADYRAEDGSDLEGLDYHQLDVSNAAAIEAFAPGLDR
LDVLVLAQGAVLYRRGEFAMDGFRKVMEVNLISLMACATKFHGLLCDTKGALIIVSSTAAYHSTMGNPAYNASKTGAVGL
TRTLAEAWAGDGIRVNGIAPGLVDTKMTKVTTANPQRLEGALQRIPLKRLGTPQDMAGAALFLASPLSSYIIGQTIVVDG
GLIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI5031737, Length=243, Percent_Identity=32.9218106995885, Blast_Score=98, Evalue=6e-21,
Organism=Homo sapiens, GI32483357, Length=240, Percent_Identity=32.9166666666667, Blast_Score=98, Evalue=7e-21,
Organism=Homo sapiens, GI40254992, Length=240, Percent_Identity=33.75, Blast_Score=95, Evalue=6e-20,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=27.3809523809524, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI7705925, Length=243, Percent_Identity=31.6872427983539, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI15277342, Length=252, Percent_Identity=30.952380952381, Blast_Score=90, Evalue=1e-18,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=26.4, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI66933014, Length=234, Percent_Identity=28.6324786324786, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI10190704, Length=243, Percent_Identity=27.5720164609054, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI33667109, Length=193, Percent_Identity=32.6424870466321, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI4758504, Length=251, Percent_Identity=27.4900398406374, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=30, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=32.9411764705882, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1787335, Length=254, Percent_Identity=31.1023622047244, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=31.5573770491803, Blast_Score=101, Evalue=3e-23,
Organism=Escherichia coli, GI1786812, Length=257, Percent_Identity=31.9066147859922, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1789057, Length=253, Percent_Identity=30.0395256916996, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790717, Length=261, Percent_Identity=29.1187739463602, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI87082100, Length=254, Percent_Identity=31.8897637795276, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789378, Length=249, Percent_Identity=29.718875502008, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=28.9256198347107, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI2367365, Length=240, Percent_Identity=27.5, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1787545, Length=270, Percent_Identity=27.7777777777778, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI2367175, Length=246, Percent_Identity=28.0487804878049, Blast_Score=61, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17561402, Length=254, Percent_Identity=34.251968503937, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=31.3008130081301, Blast_Score=105, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI25147288, Length=252, Percent_Identity=30.5555555555556, Blast_Score=100, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=31.3253012048193, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=31.6793893129771, Blast_Score=93, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI72000259, Length=270, Percent_Identity=31.8518518518519, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17560220, Length=269, Percent_Identity=33.0855018587361, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17531453, Length=261, Percent_Identity=32.183908045977, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI193204405, Length=264, Percent_Identity=32.9545454545455, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560150, Length=261, Percent_Identity=31.8007662835249, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17538182, Length=248, Percent_Identity=32.6612903225806, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17559104, Length=261, Percent_Identity=30.6513409961686, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17562908, Length=264, Percent_Identity=32.1969696969697, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17562906, Length=264, Percent_Identity=31.8181818181818, Blast_Score=84, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=272, Percent_Identity=30.5147058823529, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=266, Percent_Identity=28.1954887218045, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=266, Percent_Identity=29.6992481203008, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=275, Percent_Identity=29.4545454545455, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17563726, Length=269, Percent_Identity=26.0223048327138, Blast_Score=80, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17562910, Length=261, Percent_Identity=28.3524904214559, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=29.7794117647059, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI115534694, Length=246, Percent_Identity=28.4552845528455, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=25.6916996047431, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=28.0487804878049, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536025, Length=250, Percent_Identity=26.4, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538486, Length=261, Percent_Identity=26.4367816091954, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=27.3469387755102, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=27.9850746268657, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI193207185, Length=144, Percent_Identity=34.7222222222222, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71994604, Length=245, Percent_Identity=26.530612244898, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=247, Percent_Identity=28.3400809716599, Blast_Score=90, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6322861, Length=236, Percent_Identity=28.3898305084746, Blast_Score=62, Evalue=6e-11,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=32.5301204819277, Blast_Score=103, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=29.9595141700405, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI23397609, Length=250, Percent_Identity=32.4, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24643142, Length=240, Percent_Identity=30.8333333333333, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24644337, Length=169, Percent_Identity=34.3195266272189, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21357041, Length=247, Percent_Identity=29.9595141700405, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24644339, Length=249, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI17737361, Length=251, Percent_Identity=28.2868525896414, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571526, Length=253, Percent_Identity=28.0632411067194, Blast_Score=68, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 25512; Mature: 25512

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALDFSGRRVLVIGGSSGIGNGIAQAFRAQGARVAICGTRTRAADYRAEDGSDLEGLDY
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCE
HQLDVSNAAAIEAFAPGLDRLDVLVLAQGAVLYRRGEFAMDGFRKVMEVNLISLMACATK
EEECCCCCHHHHHHCCCCCHHEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FHGLLCDTKGALIIVSSTAAYHSTMGNPAYNASKTGAVGLTRTLAEAWAGDGIRVNGIAP
HHCEEECCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCC
GLVDTKMTKVTTANPQRLEGALQRIPLKRLGTPQDMAGAALFLASPLSSYIIGQTIVVDG
CCCCCCEEEEECCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECC
GLIL
CEEC
>Mature Secondary Structure
MNALDFSGRRVLVIGGSSGIGNGIAQAFRAQGARVAICGTRTRAADYRAEDGSDLEGLDY
CCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCE
HQLDVSNAAAIEAFAPGLDRLDVLVLAQGAVLYRRGEFAMDGFRKVMEVNLISLMACATK
EEECCCCCHHHHHHCCCCCHHEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
FHGLLCDTKGALIIVSSTAAYHSTMGNPAYNASKTGAVGLTRTLAEAWAGDGIRVNGIAP
HHCEEECCCCCEEEEECCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCC
GLVDTKMTKVTTANPQRLEGALQRIPLKRLGTPQDMAGAALFLASPLSSYIIGQTIVVDG
CCCCCCEEEEECCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHCEEEEECC
GLIL
CEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]