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The map label for this gene is 146338188

Identifier: 146338188

GI number: 146338188

Start: 1153335

End: 1153700

Strand: Direct

Name: 146338188

Synonym: BRADO1086

Alternate gene names: NA

Gene position: 1153335-1153700 (Clockwise)

Preceding gene: 146338187

Following gene: 146338191

Centisome position: 15.47

GC content: 69.95

Gene sequence:

>366_bases
ATGGATACGGATCGGTTGACCGGAACGGCGAAGGATGTCGCAGGCAAGGTCGAGGGCGGCATCGGCGAGATGACCGGCGA
CAAGAGCACGCAGGCGTCTGGCCGCGCGCGCGAGGCGTCGGGCGTCGTACAGAACCTCTACGGCCAGGCCAAGGACGCCG
CCCGCGAGGCCGGCGATGCCGCGATGGACTATGCGAAGGACACGTTCGGCAGCAGCACCGACAGCCTGCGCGACGGCACC
CAGGCGCTCACCAAGCGCGTGCAGGACAACCCGATGGGCGCCCTGCTGGTCGCTGGCGGCATCGGCTTCCTGCTGGCGAT
GCTGATGCGTCCGAGCCGGCCGCAGCCGCAGCGCTGGCGCTACTGA

Upstream 100 bases:

>100_bases
GTCGATGGCGGGCTGATTTTGTAGTTCGTCGGAACCGTCGCCGCCCGAGCCAGTTAGCAGAGCGGAAAGCCCCGCAAACG
CGAGACAAGGAGAGGCGGCG

Downstream 100 bases:

>100_bases
GCTGATCACAGCCAGCGATTTGGACCAAACAAATGGCCCGCATTCGAGAGCGAATGCGGGCCGTTTCGTTGTCTCGCTCG
CGCGTTGCGAGCGGCTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 121; Mature: 121

Protein sequence:

>121_residues
MDTDRLTGTAKDVAGKVEGGIGEMTGDKSTQASGRAREASGVVQNLYGQAKDAAREAGDAAMDYAKDTFGSSTDSLRDGT
QALTKRVQDNPMGALLVAGGIGFLLAMLMRPSRPQPQRWRY

Sequences:

>Translated_121_residues
MDTDRLTGTAKDVAGKVEGGIGEMTGDKSTQASGRAREASGVVQNLYGQAKDAAREAGDAAMDYAKDTFGSSTDSLRDGT
QALTKRVQDNPMGALLVAGGIGFLLAMLMRPSRPQPQRWRY
>Mature_121_residues
MDTDRLTGTAKDVAGKVEGGIGEMTGDKSTQASGRAREASGVVQNLYGQAKDAAREAGDAAMDYAKDTFGSSTDSLRDGT
QALTKRVQDNPMGALLVAGGIGFLLAMLMRPSRPQPQRWRY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008462 [H]

Pfam domain/function: PF05532 CsbD [H]

EC number: NA

Molecular weight: Translated: 12812; Mature: 12812

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDRLTGTAKDVAGKVEGGIGEMTGDKSTQASGRAREASGVVQNLYGQAKDAAREAGDA
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMDYAKDTFGSSTDSLRDGTQALTKRVQDNPMGALLVAGGIGFLLAMLMRPSRPQPQRWR
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Y
C
>Mature Secondary Structure
MDTDRLTGTAKDVAGKVEGGIGEMTGDKSTQASGRAREASGVVQNLYGQAKDAAREAGDA
CCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AMDYAKDTFGSSTDSLRDGTQALTKRVQDNPMGALLVAGGIGFLLAMLMRPSRPQPQRWR
HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Y
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]