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The map label for this gene is ynhG [H]

Identifier: 146338180

GI number: 146338180

Start: 1144992

End: 1145627

Strand: Reverse

Name: ynhG [H]

Synonym: BRADO1078

Alternate gene names: 146338180

Gene position: 1145627-1144992 (Counterclockwise)

Preceding gene: 146338181

Following gene: 146338166

Centisome position: 15.36

GC content: 66.67

Gene sequence:

>636_bases
GTGCTGGCTGCACCGTTGTTGTTGGCGGGCTGCATGGAGGCGACGCTGTCGCCAACCACGGATGCCGCGCTGACTCCGCG
CGACCGCCAGCTCCTGGCGCGCGCGCCTTACACCGAAGCGCGGATCCCCGAGCAATTCCAGCGTCACATCGTTGAATATA
CTCGGCAGGAACAGCCGGGCACGATCGTCGTCGATACCGATGCCCGCTTCCTCTACTACGTGCTTCCCGATCGCAAGGCG
GTCCGCTACGGCGTCGCCGTGGGCGAGGAGGCAATGGCCTTCTCCGGCGTCGCGACCGTCGGCAAGCTCGCGGAATGGCC
GGACTGGGTACCGACCGCCGACATCCAGGCGCGTCTCGGCCCCTATCCGAAGCGCGTCGCCGGTGGTCCCGCCAATCCGC
TCGGCGCCCGCGCGATCTATCTCTACGAGGGCAACAAGGACACGCTCTACCGCATCCACGGCACAAACCAGCCGGAATAT
ATCGGCCAGGCGATCTCGTCGGGCTGCATCCGCATGACCAATATCGACGTCGCCGACCTCTACAACCGCGTGCAGATGGG
TTCGACCGTGGTCGTGCTGCCGCCGGGCCAGAGCGTCGCGTCGTCGTCCGCAAACGCCTTCGCGCGCCGCATCTGA

Upstream 100 bases:

>100_bases
GTGTTGAGTGCAACGCCTTGATATTGGCGCGATCCTTCGAGCACATGGTTTATACCGCGCGTTGGGGGAGATCGAGATGC
CGAGACTGGGGCTCGCAGTG

Downstream 100 bases:

>100_bases
CGGCGGCGGCCGGTCAGGGCGCGGCGGGGCCTAGCCGTAGCGCAGCTTGAGGCCGAGGATCGCCGCGACGAGTGCCAAGG
TGATGGCATTCGCGAGGACC

Product: putative ErfK/YbiS/YcfS/YnhG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLAAPLLLAGCMEATLSPTTDAALTPRDRQLLARAPYTEARIPEQFQRHIVEYTRQEQPGTIVVDTDARFLYYVLPDRKA
VRYGVAVGEEAMAFSGVATVGKLAEWPDWVPTADIQARLGPYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEY
IGQAISSGCIRMTNIDVADLYNRVQMGSTVVVLPPGQSVASSSANAFARRI

Sequences:

>Translated_211_residues
MLAAPLLLAGCMEATLSPTTDAALTPRDRQLLARAPYTEARIPEQFQRHIVEYTRQEQPGTIVVDTDARFLYYVLPDRKA
VRYGVAVGEEAMAFSGVATVGKLAEWPDWVPTADIQARLGPYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEY
IGQAISSGCIRMTNIDVADLYNRVQMGSTVVVLPPGQSVASSSANAFARRI
>Mature_211_residues
MLAAPLLLAGCMEATLSPTTDAALTPRDRQLLARAPYTEARIPEQFQRHIVEYTRQEQPGTIVVDTDARFLYYVLPDRKA
VRYGVAVGEEAMAFSGVATVGKLAEWPDWVPTADIQARLGPYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEY
IGQAISSGCIRMTNIDVADLYNRVQMGSTVVVLPPGQSVASSSANAFARRI

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=138, Percent_Identity=36.9565217391304, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1788299, Length=139, Percent_Identity=35.2517985611511, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787356, Length=142, Percent_Identity=34.5070422535211, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787040, Length=189, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 22997; Mature: 22997

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAAPLLLAGCMEATLSPTTDAALTPRDRQLLARAPYTEARIPEQFQRHIVEYTRQEQPG
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
TIVVDTDARFLYYVLPDRKAVRYGVAVGEEAMAFSGVATVGKLAEWPDWVPTADIQARLG
EEEEECCCEEEEEECCCCCEEEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
PYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEYIGQAISSGCIRMTNIDVADL
CCCHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCHHHH
YNRVQMGSTVVVLPPGQSVASSSANAFARRI
HHHHHCCCEEEEECCCCHHHHCHHHHHHHCC
>Mature Secondary Structure
MLAAPLLLAGCMEATLSPTTDAALTPRDRQLLARAPYTEARIPEQFQRHIVEYTRQEQPG
CCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCC
TIVVDTDARFLYYVLPDRKAVRYGVAVGEEAMAFSGVATVGKLAEWPDWVPTADIQARLG
EEEEECCCEEEEEECCCCCEEEEHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCC
PYPKRVAGGPANPLGARAIYLYEGNKDTLYRIHGTNQPEYIGQAISSGCIRMTNIDVADL
CCCHHHCCCCCCCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCEEEECCCHHHH
YNRVQMGSTVVVLPPGQSVASSSANAFARRI
HHHHHCCCEEEEECCCCHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]