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The map label for this gene is 146338122

Identifier: 146338122

GI number: 146338122

Start: 1089261

End: 1090001

Strand: Reverse

Name: 146338122

Synonym: BRADO1018

Alternate gene names: NA

Gene position: 1090001-1089261 (Counterclockwise)

Preceding gene: 146338123

Following gene: 146338121

Centisome position: 14.62

GC content: 65.32

Gene sequence:

>741_bases
ATGACCATGACATCCCGCCCCGCTCGACACCGCCGGCTGTATCTTGCGGTCGCTCTCGCCGGAACCGCCGTTCTGCTTGG
CGCCTGCAATTTCCGCCGCGATCCTGACATCACGGCCAGCATTCCCGATGACTACCGGCTGCGCCATCCGATTGCCGTCC
AGGAAGCGCCCGACTCCCTCGTGGTCTTCGTCGGCCAGGGCCGCGGCGGCCTGACTGCCGAGCAGCGTGCCGAGGTTATG
GGGCTGGCACAAAGCTGGATGCGTCAGGGCACCGGCGCGATCGTCGCCGATGTACCAAGCGGCACGCCGAACGCCCGTGC
GGCCGCCGATTCGATGCGGGAGATCCAATCTCTGTTCTCCGCCGCGGGCGTTCCGCCGCACGGCGTTACCGTCCGCAACT
ATCAGCCGAAGGACCCCCGCCAGATGGCCGCGATCCGGCTGAGCTATCCGAAGCTCTCGGCGACAGCGGGTCCCTGCGGC
CTTTGGCCGGACGATCTCGGGCCCTCGGTCAAGAACAAGAACTGGTTCGACAACAAGCCTGATTGGAACTTCGGCTGCGC
CTATCAGCGCAACATGGCCGCGATGGTCGACAACCCCGCCGATCTCGTGCAGCCGCGCCCCGAAACGCCGTCCTACACGA
CCCGACGCACCGCGTTATTCGAGAAATACCGCAAGGGAGCGTCAACCGCGATCACGTATCCAGAGGCCGACAAGGCCAAA
CTCAGCGACACAGGCAAATGA

Upstream 100 bases:

>100_bases
ACCGCATCTATGGCGTGCCTGGCCGGACCGAGCCGGGGCGTAACTATCGCGGCACATACGGCTTCATCACGGACTGAGCA
GGGACCAAGGACTTGCACCC

Downstream 100 bases:

>100_bases
TCAGCTACGCCCGACAGACCCCAGAGGAGCAGCCTGACGTCGTGCCGCCGCCGGCCGACGATCATATCGCGCCGGCGCCG
CGTGTCTCGGTGCAGGCGTT

Product: putative pilus assembly protein CpaD

Products: NA

Alternate protein names: Pilus Assembly Protein CpaD; Pilus Assembly Protein; Type IV Pili Component-Like; Components Of Type IV Pilus; Type IV Pili Component-Like Protein; Type IV Pili Component; Component Of Type IV Pilus

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTMTSRPARHRRLYLAVALAGTAVLLGACNFRRDPDITASIPDDYRLRHPIAVQEAPDSLVVFVGQGRGGLTAEQRAEVM
GLAQSWMRQGTGAIVADVPSGTPNARAAADSMREIQSLFSAAGVPPHGVTVRNYQPKDPRQMAAIRLSYPKLSATAGPCG
LWPDDLGPSVKNKNWFDNKPDWNFGCAYQRNMAAMVDNPADLVQPRPETPSYTTRRTALFEKYRKGASTAITYPEADKAK
LSDTGK

Sequences:

>Translated_246_residues
MTMTSRPARHRRLYLAVALAGTAVLLGACNFRRDPDITASIPDDYRLRHPIAVQEAPDSLVVFVGQGRGGLTAEQRAEVM
GLAQSWMRQGTGAIVADVPSGTPNARAAADSMREIQSLFSAAGVPPHGVTVRNYQPKDPRQMAAIRLSYPKLSATAGPCG
LWPDDLGPSVKNKNWFDNKPDWNFGCAYQRNMAAMVDNPADLVQPRPETPSYTTRRTALFEKYRKGASTAITYPEADKAK
LSDTGK
>Mature_245_residues
TMTSRPARHRRLYLAVALAGTAVLLGACNFRRDPDITASIPDDYRLRHPIAVQEAPDSLVVFVGQGRGGLTAEQRAEVMG
LAQSWMRQGTGAIVADVPSGTPNARAAADSMREIQSLFSAAGVPPHGVTVRNYQPKDPRQMAAIRLSYPKLSATAGPCGL
WPDDLGPSVKNKNWFDNKPDWNFGCAYQRNMAAMVDNPADLVQPRPETPSYTTRRTALFEKYRKGASTAITYPEADKAKL
SDTGK

Specific function: Unknown

COG id: COG5461

COG function: function code N; Type IV pili component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26789; Mature: 26657

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMTSRPARHRRLYLAVALAGTAVLLGACNFRRDPDITASIPDDYRLRHPIAVQEAPDSL
CCCCCCCHHHHEEEEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCEE
VVFVGQGRGGLTAEQRAEVMGLAQSWMRQGTGAIVADVPSGTPNARAAADSMREIQSLFS
EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
AAGVPPHGVTVRNYQPKDPRQMAAIRLSYPKLSATAGPCGLWPDDLGPSVKNKNWFDNKP
HCCCCCCCEEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
DWNFGCAYQRNMAAMVDNPADLVQPRPETPSYTTRRTALFEKYRKGASTAITYPEADKAK
CCCCCCHHHCCCHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
LSDTGK
CCCCCC
>Mature Secondary Structure 
TMTSRPARHRRLYLAVALAGTAVLLGACNFRRDPDITASIPDDYRLRHPIAVQEAPDSL
CCCCCCHHHHEEEEEEHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCEEEECCCCEE
VVFVGQGRGGLTAEQRAEVMGLAQSWMRQGTGAIVADVPSGTPNARAAADSMREIQSLFS
EEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
AAGVPPHGVTVRNYQPKDPRQMAAIRLSYPKLSATAGPCGLWPDDLGPSVKNKNWFDNKP
HCCCCCCCEEECCCCCCCHHHEEEEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCC
DWNFGCAYQRNMAAMVDNPADLVQPRPETPSYTTRRTALFEKYRKGASTAITYPEADKAK
CCCCCCHHHCCCHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCC
LSDTGK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA