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The map label for this gene is hofQ [C]

Identifier: 146338123

GI number: 146338123

Start: 1090025

End: 1091527

Strand: Reverse

Name: hofQ [C]

Synonym: BRADO1019

Alternate gene names: 146338123

Gene position: 1091527-1090025 (Counterclockwise)

Preceding gene: 146338124

Following gene: 146338122

Centisome position: 14.64

GC content: 65.8

Gene sequence:

>1503_bases
GTGATCGAGAGGACGACCAAGATGACTTGCAGCGAAAATCAGCGGAAACTGCGGACCCTGATGGTCCGCGCGCTGTCGCT
TTCGGCCGCCGCTGCGCTGACACTCAACCCGGCGCTCGCGCCGGTGATCGCCGCGGACTACCGCCCGGCAGCCGCAGCGC
CGCCCGCAGCTGACGGTCAGATCAATGCGCGCTTTCTCGCGCTCGGTGTCGGCAAGTCCGTGGTCATAGACCTGCCGCGC
GACATCAAGGACGTTCTCGTCGCCGATCCGAAGATCGCCAATGCCGTGGTCCGCTCCTCTCAGCGCGCCTACATCATTGG
CGCGGCGGTCGGCCAGACCAACATCGTCTTCTTCGACGCCCAGGGCCAGCAGATCGCCGCCTATGACATCGCGGTCAAGC
GCGACCTCAACGGCGCACGCGCCGCGCTGAAGCAGCTCTTGCCGAATGCCGACATCCAGATCGAAGGGCTCGGCGACGGC
ATCGTGCTGACCGGCTCGGCCTCCAGCCAGATCGAGGCCCAGCAGGCCGGCGAACTCGCCGCACGGCTCGCTGGCGGCGC
CGAGAAGGTCGTCAACTCGATCACGGTGCGCGGCCGCGACCAGGTGATGCTGAAGGTGACCGTTGCCGAGGTACAGCGCT
CGGTCGTCAAGCAGCTCGGCATCGACCTCTCCGGCCAGCTCAACTACGGCACGGCCGTCGTCAAATTCGCCAACTCCAAC
CCGTTCACGGCGTATGGCAGCAACCTGGTCTCGAACAATGCCGTCAGCGCCGCGTTCGGATCGACCCCGTCCGTGCAGGC
GACGTTGCGCGCCATGGAGAACGCGGGCGTGATCCGTACCTTGGCCGAGCCCAACCTGACCGCGATCTCCGGCGAGTCCG
CGACCTTCATCGCCGGCGGCGAGTTTCCGGTTCCTGCCGGCTACTCCTGCGATCCCACGACCCATGTCTGTACCACGCAG
ATCAGCTTCAAGAAGTTCGGCATCTCGCTGAACTTCACGCCCATCGTCCTCTCCGAGGGCCGCATCTCGATGCGGGTGAT
GACCGAGGTATCGGAGCTCTCCAACGAGAACTCCATCACGCTGTCGCAGGCGGTGAGCTCGACGACCGTCAACTCGCTGA
CGGTGCCGTCGATCAAGACCCGCCGGGCGGAGACGACGCTCGAAATTCCCTCGGGCGGCGCCATGGCGATGGCCGGCCTG
ATCCAGCAGCAGACCAAGCAGGCGATCAGCGGCATGCCCGGCCTGATGCAGCTGCCCGTCCTCGGCGCACTGTTCCGCAG
CCGCGACTACGTCAACAATCAGACCGAGCTGATGGTGCTGGTGACGCCGTTCGTGGTTCGCGCCGTCTCGCAGAAGGATC
TGTCCCGCCCGGATGACGGCTTCGCGGCAGCTTCGGATCCGCAGGCCGATCTCCTCGGCAGCATCAACCGCATCTATGGC
GTGCCTGGCCGGACCGAGCCGGGGCGTAACTATCGCGGCACATACGGCTTCATCACGGACTGA

Upstream 100 bases:

>100_bases
ACGTCAACATGGCCGAGCAGCGCTCGGACGATAATCGCAGGCGCGGAGACAGCGTTGCCGTCGTTCGCTTCGGCATTCCC
AGCACGATGACGACGCAGAA

Downstream 100 bases:

>100_bases
GCAGGGACCAAGGACTTGCACCCATGACCATGACATCCCGCCCCGCTCGACACCGCCGGCTGTATCTTGCGGTCGCTCTC
GCCGGAACCGCCGTTCTGCT

Product: putative pilus assembly protein CpaC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MIERTTKMTCSENQRKLRTLMVRALSLSAAAALTLNPALAPVIAADYRPAAAAPPAADGQINARFLALGVGKSVVIDLPR
DIKDVLVADPKIANAVVRSSQRAYIIGAAVGQTNIVFFDAQGQQIAAYDIAVKRDLNGARAALKQLLPNADIQIEGLGDG
IVLTGSASSQIEAQQAGELAARLAGGAEKVVNSITVRGRDQVMLKVTVAEVQRSVVKQLGIDLSGQLNYGTAVVKFANSN
PFTAYGSNLVSNNAVSAAFGSTPSVQATLRAMENAGVIRTLAEPNLTAISGESATFIAGGEFPVPAGYSCDPTTHVCTTQ
ISFKKFGISLNFTPIVLSEGRISMRVMTEVSELSNENSITLSQAVSSTTVNSLTVPSIKTRRAETTLEIPSGGAMAMAGL
IQQQTKQAISGMPGLMQLPVLGALFRSRDYVNNQTELMVLVTPFVVRAVSQKDLSRPDDGFAAASDPQADLLGSINRIYG
VPGRTEPGRNYRGTYGFITD

Sequences:

>Translated_500_residues
MIERTTKMTCSENQRKLRTLMVRALSLSAAAALTLNPALAPVIAADYRPAAAAPPAADGQINARFLALGVGKSVVIDLPR
DIKDVLVADPKIANAVVRSSQRAYIIGAAVGQTNIVFFDAQGQQIAAYDIAVKRDLNGARAALKQLLPNADIQIEGLGDG
IVLTGSASSQIEAQQAGELAARLAGGAEKVVNSITVRGRDQVMLKVTVAEVQRSVVKQLGIDLSGQLNYGTAVVKFANSN
PFTAYGSNLVSNNAVSAAFGSTPSVQATLRAMENAGVIRTLAEPNLTAISGESATFIAGGEFPVPAGYSCDPTTHVCTTQ
ISFKKFGISLNFTPIVLSEGRISMRVMTEVSELSNENSITLSQAVSSTTVNSLTVPSIKTRRAETTLEIPSGGAMAMAGL
IQQQTKQAISGMPGLMQLPVLGALFRSRDYVNNQTELMVLVTPFVVRAVSQKDLSRPDDGFAAASDPQADLLGSINRIYG
VPGRTEPGRNYRGTYGFITD
>Mature_500_residues
MIERTTKMTCSENQRKLRTLMVRALSLSAAAALTLNPALAPVIAADYRPAAAAPPAADGQINARFLALGVGKSVVIDLPR
DIKDVLVADPKIANAVVRSSQRAYIIGAAVGQTNIVFFDAQGQQIAAYDIAVKRDLNGARAALKQLLPNADIQIEGLGDG
IVLTGSASSQIEAQQAGELAARLAGGAEKVVNSITVRGRDQVMLKVTVAEVQRSVVKQLGIDLSGQLNYGTAVVKFANSN
PFTAYGSNLVSNNAVSAAFGSTPSVQATLRAMENAGVIRTLAEPNLTAISGESATFIAGGEFPVPAGYSCDPTTHVCTTQ
ISFKKFGISLNFTPIVLSEGRISMRVMTEVSELSNENSITLSQAVSSTTVNSLTVPSIKTRRAETTLEIPSGGAMAMAGL
IQQQTKQAISGMPGLMQLPVLGALFRSRDYVNNQTELMVLVTPFVVRAVSQKDLSRPDDGFAAASDPQADLLGSINRIYG
VPGRTEPGRNYRGTYGFITD

Specific function: Involved in the secretion of an unknown compound (Potential) [H]

COG id: COG4964

COG function: function code U; Flp pilus assembly protein, secretin CpaC

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BON domain [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=182, Percent_Identity=27.4725274725275, Blast_Score=65, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR004846
- InterPro:   IPR007055 [H]

Pfam domain/function: PF04972 BON; PF00263 Secretin [H]

EC number: NA

Molecular weight: Translated: 52631; Mature: 52631

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIERTTKMTCSENQRKLRTLMVRALSLSAAAALTLNPALAPVIAADYRPAAAAPPAADGQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCCCCCCCCCCCCC
INARFLALGVGKSVVIDLPRDIKDVLVADPKIANAVVRSSQRAYIIGAAVGQTNIVFFDA
CCEEEEEEECCCEEEEECCCCHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEC
QGQQIAAYDIAVKRDLNGARAALKQLLPNADIQIEGLGDGIVLTGSASSQIEAQQAGELA
CCCEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHH
ARLAGGAEKVVNSITVRGRDQVMLKVTVAEVQRSVVKQLGIDLSGQLNYGTAVVKFANSN
HHHCCCHHHHHHHHEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
PFTAYGSNLVSNNAVSAAFGSTPSVQATLRAMENAGVIRTLAEPNLTAISGESATFIAGG
CCEECCCCHHCCCCCEEECCCCCCHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEECC
EFPVPAGYSCDPTTHVCTTQISFKKFGISLNFTPIVLSEGRISMRVMTEVSELSNENSIT
CCCCCCCCCCCCCCCEEEEEEEEHHCCEEECCEEEEEECCCEEEHHHHHHHHHCCCCCEE
LSQAVSSTTVNSLTVPSIKTRRAETTLEIPSGGAMAMAGLIQQQTKQAISGMPGLMQLPV
HHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LGALFRSRDYVNNQTELMVLVTPFVVRAVSQKDLSRPDDGFAAASDPQADLLGSINRIYG
HHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
VPGRTEPGRNYRGTYGFITD
CCCCCCCCCCCCCCCCEECC
>Mature Secondary Structure
MIERTTKMTCSENQRKLRTLMVRALSLSAAAALTLNPALAPVIAADYRPAAAAPPAADGQ
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHCCCCCCCCCCCCCCCCC
INARFLALGVGKSVVIDLPRDIKDVLVADPKIANAVVRSSQRAYIIGAAVGQTNIVFFDA
CCEEEEEEECCCEEEEECCCCHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCCEEEEEEC
QGQQIAAYDIAVKRDLNGARAALKQLLPNADIQIEGLGDGIVLTGSASSQIEAQQAGELA
CCCEEEEEEEEEECCCCHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHH
ARLAGGAEKVVNSITVRGRDQVMLKVTVAEVQRSVVKQLGIDLSGQLNYGTAVVKFANSN
HHHCCCHHHHHHHHEECCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCC
PFTAYGSNLVSNNAVSAAFGSTPSVQATLRAMENAGVIRTLAEPNLTAISGESATFIAGG
CCEECCCCHHCCCCCEEECCCCCCHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEECC
EFPVPAGYSCDPTTHVCTTQISFKKFGISLNFTPIVLSEGRISMRVMTEVSELSNENSIT
CCCCCCCCCCCCCCCEEEEEEEEHHCCEEECCEEEEEECCCEEEHHHHHHHHHCCCCCEE
LSQAVSSTTVNSLTVPSIKTRRAETTLEIPSGGAMAMAGLIQQQTKQAISGMPGLMQLPV
HHHHHHHCCCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
LGALFRSRDYVNNQTELMVLVTPFVVRAVSQKDLSRPDDGFAAASDPQADLLGSINRIYG
HHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
VPGRTEPGRNYRGTYGFITD
CCCCCCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]