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The map label for this gene is amaB [H]

Identifier: 146338117

GI number: 146338117

Start: 1083215

End: 1084474

Strand: Reverse

Name: amaB [H]

Synonym: BRADO1013

Alternate gene names: 146338117

Gene position: 1084474-1083215 (Counterclockwise)

Preceding gene: 146338118

Following gene: 146338115

Centisome position: 14.54

GC content: 68.89

Gene sequence:

>1260_bases
TTGACCAGAGGTCTCCGCCTGATGTCCGACACTCTCCGCCGCGCCGACGGCGCCCGCGTCCTCGCCGATCTGAACGCGCT
GCGGGCCTTCGGCACCTACAAGACCGGCGTGCATCGCCCGACATTTTCCGACGCGCATCGCCAATCCTTGCATTGGCTCG
CCGCACGCCTGCCCGACGCGCAGCTCACGCCGGAGATCGACGGCATCGGCAATGTGCTGGGCACCAGCGCCAAGCCCGGG
CCCAAGCTGCTGGCCGGCTCGCATCTCGAGAGTCAGAACTACGCCGGCTGGCTCGACGGCCCGCTCGGCGTCGTGTACGC
GCTCGAAGCCGCCCGCGTGCTCAATGCTGATCCCTCCATCGCGGGCGCCGTCGAGGTGGCGTCCTGGTGCGACGAGGAGG
GCCATTTCGGCGCTTTCCTCGGCAGCCGCTCCTACGTCGGTGACGTCAGCGAGGCCGACATCGATGCCGCGCGCGACCGC
AGCAGCCCGCGCACGATGCGCGAGGCGCTCGCCGAGATGAGCCTTGCCGGCCGCCCGCGCCTGCATGCCGCGCGCGGCCG
GCATATCGGCTATCTGGAAGCCCATATCGAGCAGGGCGACACGCTCGAACAAGGCGCGCTCAAGGTCGGAATCGTCACCT
CGATCGTCGGCATCTGGCAATATCGCATTGTCTTCACCGGCGCGCAGAACCATGCCGGCACGACGCGGATGGCGGTGCGC
AAGGATGCGGGACTCGCGCTCGCCAAATTCTGCGTCGCGATCGACGCGCATTTCCCGTCCGCCTGCGGCCCGCGCACGGT
GTGGACCACCGGTCGCATCACGCTCGATCCGGGCGCGCCGAGCATCATCCCGGGCCAGGCCGAGATGCTGTTCCAGATCC
GCGACGACAATCCCGCAGTCATCGATCGCCTCGAAGCGCTGCTGCGCGAGCTGGCCGCGCAGGCCACCGCGGCAGGTCCC
TGTCCGGTCGTCGTCGAGCGCATCCGCACTGGCGCGCCGGCGATGATGGACGACCGTTTTCAGGATGCGATCGAGGCCGC
GAGCGGCGCGCTTGCCGATGGCAAATCGCTGCGGATGCCGAGCGGCGCAGGCCATGATGCGCAGGTGCTGGCCACGATCA
TGCCCGCCGCCATGCTGTTCGTGCCGTCGATCGGCGGCATCAGCCATCACTGGACGGAGAATACGTCCGATGCTGATATC
GTCACGGGTGCCGACGTGTTCGTCGACACCTGCCGCAGGCTGCTCGCGGGCGCCGCGTAG

Upstream 100 bases:

>100_bases
GGACCGACCGGCATCAAGGTCGCCGCCATGCAGTAGAGGCGGTCCCGTCGGCGAATTTTTCGCTTGCGGCGGCGGCGCTG
CCCTGGAAGCTAGGCGGAGC

Downstream 100 bases:

>100_bases
TTCGCCTCACTCGTCCGGCTGGCTGAGTGCGGCCATCGGCACCGCGCTCCGCGGCTTGCCCTTGCCTTGACCCTGGCCTT
GACCCTGCCCCTGCAGCATC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTRGLRLMSDTLRRADGARVLADLNALRAFGTYKTGVHRPTFSDAHRQSLHWLAARLPDAQLTPEIDGIGNVLGTSAKPG
PKLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSIAGAVEVASWCDEEGHFGAFLGSRSYVGDVSEADIDAARDR
SSPRTMREALAEMSLAGRPRLHAARGRHIGYLEAHIEQGDTLEQGALKVGIVTSIVGIWQYRIVFTGAQNHAGTTRMAVR
KDAGLALAKFCVAIDAHFPSACGPRTVWTTGRITLDPGAPSIIPGQAEMLFQIRDDNPAVIDRLEALLRELAAQATAAGP
CPVVVERIRTGAPAMMDDRFQDAIEAASGALADGKSLRMPSGAGHDAQVLATIMPAAMLFVPSIGGISHHWTENTSDADI
VTGADVFVDTCRRLLAGAA

Sequences:

>Translated_419_residues
MTRGLRLMSDTLRRADGARVLADLNALRAFGTYKTGVHRPTFSDAHRQSLHWLAARLPDAQLTPEIDGIGNVLGTSAKPG
PKLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSIAGAVEVASWCDEEGHFGAFLGSRSYVGDVSEADIDAARDR
SSPRTMREALAEMSLAGRPRLHAARGRHIGYLEAHIEQGDTLEQGALKVGIVTSIVGIWQYRIVFTGAQNHAGTTRMAVR
KDAGLALAKFCVAIDAHFPSACGPRTVWTTGRITLDPGAPSIIPGQAEMLFQIRDDNPAVIDRLEALLRELAAQATAAGP
CPVVVERIRTGAPAMMDDRFQDAIEAASGALADGKSLRMPSGAGHDAQVLATIMPAAMLFVPSIGGISHHWTENTSDADI
VTGADVFVDTCRRLLAGAA
>Mature_418_residues
TRGLRLMSDTLRRADGARVLADLNALRAFGTYKTGVHRPTFSDAHRQSLHWLAARLPDAQLTPEIDGIGNVLGTSAKPGP
KLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSIAGAVEVASWCDEEGHFGAFLGSRSYVGDVSEADIDAARDRS
SPRTMREALAEMSLAGRPRLHAARGRHIGYLEAHIEQGDTLEQGALKVGIVTSIVGIWQYRIVFTGAQNHAGTTRMAVRK
DAGLALAKFCVAIDAHFPSACGPRTVWTTGRITLDPGAPSIIPGQAEMLFQIRDDNPAVIDRLEALLRELAAQATAAGPC
PVVVERIRTGAPAMMDDRFQDAIEAASGALADGKSLRMPSGAGHDAQVLATIMPAAMLFVPSIGGISHHWTENTSDADIV
TGADVFVDTCRRLLAGAA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=391, Percent_Identity=28.1329923273657, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44433; Mature: 44302

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS00962 RIBOSOMAL_S2_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRGLRLMSDTLRRADGARVLADLNALRAFGTYKTGVHRPTFSDAHRQSLHWLAARLPDA
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCC
QLTPEIDGIGNVLGTSAKPGPKLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSI
CCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
AGAVEVASWCDEEGHFGAFLGSRSYVGDVSEADIDAARDRSSPRTMREALAEMSLAGRPR
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
LHAARGRHIGYLEAHIEQGDTLEQGALKVGIVTSIVGIWQYRIVFTGAQNHAGTTRMAVR
CHHHCCCCEEEEEEECCCCCCHHHCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHH
KDAGLALAKFCVAIDAHFPSACGPRTVWTTGRITLDPGAPSIIPGQAEMLFQIRDDNPAV
CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCCCEEEEEEECCCCHHH
IDRLEALLRELAAQATAAGPCPVVVERIRTGAPAMMDDRFQDAIEAASGALADGKSLRMP
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SGAGHDAQVLATIMPAAMLFVPSIGGISHHWTENTSDADIVTGADVFVDTCRRLLAGAA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TRGLRLMSDTLRRADGARVLADLNALRAFGTYKTGVHRPTFSDAHRQSLHWLAARLPDA
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCCCC
QLTPEIDGIGNVLGTSAKPGPKLLAGSHLESQNYAGWLDGPLGVVYALEAARVLNADPSI
CCCCCCCCHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCH
AGAVEVASWCDEEGHFGAFLGSRSYVGDVSEADIDAARDRSSPRTMREALAEMSLAGRPR
HHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
LHAARGRHIGYLEAHIEQGDTLEQGALKVGIVTSIVGIWQYRIVFTGAQNHAGTTRMAVR
CHHHCCCCEEEEEEECCCCCCHHHCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHH
KDAGLALAKFCVAIDAHFPSACGPRTVWTTGRITLDPGAPSIIPGQAEMLFQIRDDNPAV
CCCCHHHHHHHHHHHCCCCCCCCCCEEEECCEEEECCCCCCCCCCCEEEEEEECCCCHHH
IDRLEALLRELAAQATAAGPCPVVVERIRTGAPAMMDDRFQDAIEAASGALADGKSLRMP
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
SGAGHDAQVLATIMPAAMLFVPSIGGISHHWTENTSDADIVTGADVFVDTCRRLLAGAA
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]