| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yvbT [H]
Identifier: 146338100
GI number: 146338100
Start: 1061636
End: 1062574
Strand: Direct
Name: yvbT [H]
Synonym: BRADO0996
Alternate gene names: 146338100
Gene position: 1061636-1062574 (Clockwise)
Preceding gene: 146338094
Following gene: 146338102
Centisome position: 14.24
GC content: 67.73
Gene sequence:
>939_bases TTGGCGCGCCACGTCGATCAGCTCGGTTATGTCCGCTACTGGCTCGCCGAGCATCACAGCCTTGTTTCGGTGGCGAGCCC GTCGCCTGACATCATGATCGGGCAGATCGCGGCCGTCACAAAACGCATCCGCGTCGGCTCCGGCGGCGTGATGCTGCCCA ACCATGCGCCACTGGTGGTCGCCGAACGCTTCAAGATGCTGGAGGCGCTTTTTCCGGGCCGGATCGACCTCGGCCTGGGC CGCGCGCCCGGCACCGACGGCACCACGGCCTATGCGCTGAGGAGCCGGCTCGACCGCCGTGACGGCGACGATTTCCTGGA GCGGCTGCATGAGCTGACCCTTTGGCAGACGCGGGAGTTCCCCGCGGGCCATCCCTACAACAACGTCATCGCGATGCCCG ACGATGCGCCGCTGCCGCCGATCTTTCTGCTCGGCTCCAGCGACTATTCCAGCGAGCTCTCGGCGCAGATGGGCATGGGG TTTGGCTTCGCGCATCATTTCGCCAATCACGACGCGATCGACGCGATGACCAATTATCGCGCACATTTCACCGCCTCGCG CTGGCGCTCGCAGCCGCATGCGATCCTGGCGGTCGCCGTGGTGACGGCCGAGACCGATGCGGAAGCCGAGCGGCTGGCGT CGTCGATGGACCTCAATCGTCTCCGGCGCGACCGCGGCCAGTTCCTGCCGCTGCCGAGCCCGGAGGAGGCGGCGGCCTAT CCGTATACGGACTCCGACCGCGCCTCGATCGCCCGCAACCGCTCAAGACTGTTCGTCGGCTCGCCCGCGACGGTTCGCGC CAAGCTCGACCCGATGATCGCGGCGAGCCAGGCCGACGAGCTGATGGTGATCACCGCGATCTTCGACCACGAGGCCCGCA AGCGCTCCTACACCCTGCTCGCCGACGCCTTCGGCCTGGAGCGGCAGGCGGCGGCGTAA
Upstream 100 bases:
>100_bases CAGCCATTACGTTGAGACTATGATCCCGATTTCAGTCCTCGACCTCTCCGTCACAACCACGGCCACGCCGGCCTCGGCGG CGTTGCGCAACAGCATAGAT
Downstream 100 bases:
>100_bases CGGGAGTCCTCGACAGACCTCGATCGGACTTGGGAGCGGCAGAGCAGGATCATCTCCCCGCGATCTCGATTGAGGATCCG AGTTTGCGCTCGTCGTTCTC
Product: putative monooxygenase with luciferase-like ATPase activity
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVVAERFKMLEALFPGRIDLGLG RAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREFPAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMG FGFAHHFANHDAIDAMTNYRAHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLLADAFGLERQAAA
Sequences:
>Translated_312_residues MARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVVAERFKMLEALFPGRIDLGLG RAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREFPAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMG FGFAHHFANHDAIDAMTNYRAHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLLADAFGLERQAAA >Mature_311_residues ARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVVAERFKMLEALFPGRIDLGLGR APGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREFPAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMGF GFAHHFANHDAIDAMTNYRAHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAYP YTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLLADAFGLERQAAA
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]
Homologues:
Organism=Escherichia coli, GI1789551, Length=302, Percent_Identity=41.0596026490066, Blast_Score=222, Evalue=3e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019949 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 34406; Mature: 34275
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVV CCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEHHHHHHHHHHEECCCCEECCCCCCHHH AERFKMLEALFPGRIDLGLGRAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREF HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC PAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMGFGFAHHFANHDAIDAMTNYR CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH AHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY HEEEHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLL CCCCCHHHHHHHCCCEEEECCCCEEEEECCCCEECCCCCCEEEEEEECCCHHHHHHEEEE ADAFGLERQAAA HHHHCCCHHCCC >Mature Secondary Structure ARHVDQLGYVRYWLAEHHSLVSVASPSPDIMIGQIAAVTKRIRVGSGGVMLPNHAPLVV CCCHHHHHHHHHHHHHCCCEEEECCCCCCEEEHHHHHHHHHHEECCCCEECCCCCCHHH AERFKMLEALFPGRIDLGLGRAPGTDGTTAYALRSRLDRRDGDDFLERLHELTLWQTREF HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC PAGHPYNNVIAMPDDAPLPPIFLLGSSDYSSELSAQMGMGFGFAHHFANHDAIDAMTNYR CCCCCCCCEEECCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH AHFTASRWRSQPHAILAVAVVTAETDAEAERLASSMDLNRLRRDRGQFLPLPSPEEAAAY HEEEHHHHCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC PYTDSDRASIARNRSRLFVGSPATVRAKLDPMIAASQADELMVITAIFDHEARKRSYTLL CCCCCHHHHHHHCCCEEEECCCCEEEEECCCCEECCCCCCEEEEEEECCCHHHHHHEEEE ADAFGLERQAAA HHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]