Click here to switch to the map view.

The map label for this gene is 146338060

Identifier: 146338060

GI number: 146338060

Start: 1014398

End: 1014811

Strand: Reverse

Name: 146338060

Synonym: BRADO0955

Alternate gene names: NA

Gene position: 1014811-1014398 (Counterclockwise)

Preceding gene: 146338065

Following gene: 146338058

Centisome position: 13.61

GC content: 65.94

Gene sequence:

>414_bases
ATGAGCAGCATTCCCGCCGGCTTCGAGCCGCATTTTCGCAAGAGCCCGTTCACCGATCCCTGGGAGCCGCTTTACGCCAG
GAGGACCGACAAGGCCGTCATCCTCGGCCTGCGGCTGGCCATGCCGCACACCAATTCGCGCGGCCTGATCCATGGCGGGC
TGATCGCCTCGCTCGCCGACAATGCGATGGGCTACAGCTGCGCCCAGGCGCTGGGCTGGGAGGTCTCGCTGGTCACGATC
AACCTCGCCGTCGACTATATCGGCAGCGCCGGCATCGGACAGTGGCTCAGCGTCGAGAGCGACGTCATCAAGAGCGGACG
CACGGTGTGCTTCGCGCAGAGCCTTGTGCTCGCCGACGACGCGGTCATCGCGCGGGCGAATGCGACGTTTCGCGTGGTGC
CGAAGAAGGAGTGA

Upstream 100 bases:

>100_bases
TCAAACATCGGCGCAAAACACGTTTGAAACTTTGTAGGCGGTGCAAAATACGCGCGGACGTCGTTGACTGCCGACATCGC
CAGCAACGATCGAGACCTGC

Downstream 100 bases:

>100_bases
CCGGGCCAGTCCGCCTGCGCGTCAGGATTGGCGTCGTCGCGCCACACCTCCGTCATTCCGGGTTCAAGGCCTTCGGCCTT
GCCCCGGAATGACGGACGTG

Product: putative thioesterase/thiol ester dehydrase-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSSIPAGFEPHFRKSPFTDPWEPLYARRTDKAVILGLRLAMPHTNSRGLIHGGLIASLADNAMGYSCAQALGWEVSLVTI
NLAVDYIGSAGIGQWLSVESDVIKSGRTVCFAQSLVLADDAVIARANATFRVVPKKE

Sequences:

>Translated_137_residues
MSSIPAGFEPHFRKSPFTDPWEPLYARRTDKAVILGLRLAMPHTNSRGLIHGGLIASLADNAMGYSCAQALGWEVSLVTI
NLAVDYIGSAGIGQWLSVESDVIKSGRTVCFAQSLVLADDAVIARANATFRVVPKKE
>Mature_136_residues
SSIPAGFEPHFRKSPFTDPWEPLYARRTDKAVILGLRLAMPHTNSRGLIHGGLIASLADNAMGYSCAQALGWEVSLVTIN
LAVDYIGSAGIGQWLSVESDVIKSGRTVCFAQSLVLADDAVIARANATFRVVPKKE

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 14743; Mature: 14612

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIPAGFEPHFRKSPFTDPWEPLYARRTDKAVILGLRLAMPHTNSRGLIHGGLIASLAD
CCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHH
NAMGYSCAQALGWEVSLVTINLAVDYIGSAGIGQWLSVESDVIKSGRTVCFAQSLVLADD
CCCCHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEEHEEHCCCC
AVIARANATFRVVPKKE
EEEEECCCEEEEEECCC
>Mature Secondary Structure 
SSIPAGFEPHFRKSPFTDPWEPLYARRTDKAVILGLRLAMPHTNSRGLIHGGLIASLAD
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCEEECHHHHHHHH
NAMGYSCAQALGWEVSLVTINLAVDYIGSAGIGQWLSVESDVIKSGRTVCFAQSLVLADD
CCCCHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEEHEEHCCCC
AVIARANATFRVVPKKE
EEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]