| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146338058
Identifier: 146338058
GI number: 146338058
Start: 1012649
End: 1013281
Strand: Reverse
Name: 146338058
Synonym: BRADO0953
Alternate gene names: NA
Gene position: 1013281-1012649 (Counterclockwise)
Preceding gene: 146338060
Following gene: 146338055
Centisome position: 13.59
GC content: 65.56
Gene sequence:
>633_bases ATGACCCAGGCAACCATCCGCACGCCCGGCGACGTCATGTTCTCACCCGCCGCGAGGACGATCCAGGCGCGCAAGGGCTC GCGGGAAAGCTATGCGCATGTGGAGGAGACCCGCGGCTTTCGCCACGAGGTCGATGCCGATCTCGCCGGCCGCCTCGCCG AGGCCACGAGCTTCTATCTCGCCACGGCATCGGCCGACGGACAGCCCTATATCCAGCACCGCGGCGGACCGAAGGGGTTT CTGAAGGTGCTCGACAGCCGCACGCTGGCCTTCGCGGACTTCAGCGGGAACAAGCAGTACATCACCCAAGGCAATCTGTC GGAGAACCCGCGCGCCTACATCTTCGTCATGGACTATGCGCATCGCCGCCGGGTGAAGATCTGGGGCACGGCGCGGGTGG TCGAGGACGATGCCGCGCTCACGGCCTCGCTGATGCCCAAAGGCTACAAGGCGCGGCCCGAGCAGGTGATCCTGTTCACG ATCGAGGCCTGGGACACCAATTGTCCGCAGCACATTCCGCAGAAGTTCGATGCCGGTGATGTCGCGGAGGCGCTGGCGAT GCGCGATACCAGGATCGCGGAGCTCGAGGCGGAGGTGGCGAAGTTGAAGGGCGAAGGAGCCGCCACCGTTTAG
Upstream 100 bases:
>100_bases TTTGCAATGATCCAGTGTCAACTGGCCTGATTATTTCTGTTGGGCGTTGAGGCCATATTGGCGTGACAGCGGCACTGCCG CAGGACAAGGAGTCATTGCG
Downstream 100 bases:
>100_bases ATGAGCGTTTCCTGAGAACCGCGGACACGGCGTACTGGATCGCCCGCTTTCGCGGGCGATGACAGCTGGATGTCCATTGA TGATGTGCCAAGCATCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: Pyridoxamine 5-Phosphate Oxidase; Pyridoxine 5-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Pyridoxine 5`-Phosphate Oxidase Protein
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MTQATIRTPGDVMFSPAARTIQARKGSRESYAHVEETRGFRHEVDADLAGRLAEATSFYLATASADGQPYIQHRGGPKGF LKVLDSRTLAFADFSGNKQYITQGNLSENPRAYIFVMDYAHRRRVKIWGTARVVEDDAALTASLMPKGYKARPEQVILFT IEAWDTNCPQHIPQKFDAGDVAEALAMRDTRIAELEAEVAKLKGEGAATV
Sequences:
>Translated_210_residues MTQATIRTPGDVMFSPAARTIQARKGSRESYAHVEETRGFRHEVDADLAGRLAEATSFYLATASADGQPYIQHRGGPKGF LKVLDSRTLAFADFSGNKQYITQGNLSENPRAYIFVMDYAHRRRVKIWGTARVVEDDAALTASLMPKGYKARPEQVILFT IEAWDTNCPQHIPQKFDAGDVAEALAMRDTRIAELEAEVAKLKGEGAATV >Mature_209_residues TQATIRTPGDVMFSPAARTIQARKGSRESYAHVEETRGFRHEVDADLAGRLAEATSFYLATASADGQPYIQHRGGPKGFL KVLDSRTLAFADFSGNKQYITQGNLSENPRAYIFVMDYAHRRRVKIWGTARVVEDDAALTASLMPKGYKARPEQVILFTI EAWDTNCPQHIPQKFDAGDVAEALAMRDTRIAELEAEVAKLKGEGAATV
Specific function: Unknown
COG id: COG3576
COG function: function code R; Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23178; Mature: 23047
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQATIRTPGDVMFSPAARTIQARKGSRESYAHVEETRGFRHEVDADLAGRLAEATSFYL CCCCEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHEEEE ATASADGQPYIQHRGGPKGFLKVLDSRTLAFADFSGNKQYITQGNLSENPRAYIFVMDYA EEECCCCCCCEECCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEECC HRRRVKIWGTARVVEDDAALTASLMPKGYKARPEQVILFTIEAWDTNCPQHIPQKFDAGD CCCEEEEEEEEEEEECCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCHH VAEALAMRDTRIAELEAEVAKLKGEGAATV HHHHHHHCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TQATIRTPGDVMFSPAARTIQARKGSRESYAHVEETRGFRHEVDADLAGRLAEATSFYL CCCEECCCCCEEECCCHHHHHHCCCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHEEEE ATASADGQPYIQHRGGPKGFLKVLDSRTLAFADFSGNKQYITQGNLSENPRAYIFVMDYA EEECCCCCCCEECCCCHHHHHHHHCCCEEEEEECCCCEEEEEECCCCCCCEEEEEEEECC HRRRVKIWGTARVVEDDAALTASLMPKGYKARPEQVILFTIEAWDTNCPQHIPQKFDAGD CCCEEEEEEEEEEEECCHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHCCCCCCCHH VAEALAMRDTRIAELEAEVAKLKGEGAATV HHHHHHHCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA