| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is caiD [C]
Identifier: 146338048
GI number: 146338048
Start: 1005606
End: 1006403
Strand: Reverse
Name: caiD [C]
Synonym: BRADO0943
Alternate gene names: 146338048
Gene position: 1006403-1005606 (Counterclockwise)
Preceding gene: 146338049
Following gene: 146338047
Centisome position: 13.5
GC content: 67.54
Gene sequence:
>798_bases ATGACCGACGGACCGAGCAGCCAAGGTGGCGATGCGCCAAGCACGCCGGTTCTGACGATCGAAGGGCCGCGCGCCACCAT CCGGCTCAACCGGCCGCGCCATCTCAACCGCCTGCAGCCCGAGGACCTCGGCGCGTTGATGGCGCTGTTCGACCGCGTCG AAGCCGACGCCGGATTGCGCGTGCTCGTCCTGACCGGGACCGGGCGCGCGTTCAGCGCCGGTTTCGATCTCGGCGCGATC GGGGGCGGGCCGGAGACCAGCCCGGCAGGTGGCGCGGGCCCATCGTTCGAAGCGGTCGTGGACCGGCTGGAGGACCTGGC GCTGCCGACGATCTGCCGGCTCAATGGCGGTGTCTATGGCGGGTCGACCGACCTCGCGCTGGCATGCGATTTCCGGATCG GAGTCGACACCGCAGAAATGTTCATGCCGGCCGCGCGGCTCGGGCTGCACTACTACCCGAACGGCATCAAGCGTTACGTC TCCCGCCTTGGCGTCGATAATGCCAAGCACCTCTTTCTCACCGCCGAGAAGATCGGCGCCGCCGAAATGCTGCGGATCGG CTACCTCACCGGCATGGTGGCGGCCGACGCGCTCGATGCCGAGGTCGAACGATTAGCTGCGCTGCTGGCCGGCAACGCGC CGGCCGCGATGCGCGGCATGAAGCGCGCGATCAACGAGTTTGCCCGCGGCATGCTGGACGATGCGGCGGCTCGCCGCAGA CATCAGGACAGCCTGAGCGGATCGGAGATCCAGGAGGGCATGAAATCGTTTGCAGAAAAAAGGGCACCGCGGTTTTGA
Upstream 100 bases:
>100_bases TGCTCGATCTCGTCGATTTTCGCGTGCTGATGGCACGCCACCCCGATCTGGCGCAGAGCATCGATGCCGAGGCCGTGCGC CGAACCTTGGAGAACAGGAC
Downstream 100 bases:
>100_bases CGGCAATGCAGCGATCTGTCCGATCAGGATTGCATGCATCCCGCGGTATGCAGCCGGTGTTCCGCCACACGTTCAACGAA CTATCGACCTAAAGCTCCAA
Product: putative enoyl-CoA hydratase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTDGPSSQGGDAPSTPVLTIEGPRATIRLNRPRHLNRLQPEDLGALMALFDRVEADAGLRVLVLTGTGRAFSAGFDLGAI GGGPETSPAGGAGPSFEAVVDRLEDLALPTICRLNGGVYGGSTDLALACDFRIGVDTAEMFMPAARLGLHYYPNGIKRYV SRLGVDNAKHLFLTAEKIGAAEMLRIGYLTGMVAADALDAEVERLAALLAGNAPAAMRGMKRAINEFARGMLDDAAARRR HQDSLSGSEIQEGMKSFAEKRAPRF
Sequences:
>Translated_265_residues MTDGPSSQGGDAPSTPVLTIEGPRATIRLNRPRHLNRLQPEDLGALMALFDRVEADAGLRVLVLTGTGRAFSAGFDLGAI GGGPETSPAGGAGPSFEAVVDRLEDLALPTICRLNGGVYGGSTDLALACDFRIGVDTAEMFMPAARLGLHYYPNGIKRYV SRLGVDNAKHLFLTAEKIGAAEMLRIGYLTGMVAADALDAEVERLAALLAGNAPAAMRGMKRAINEFARGMLDDAAARRR HQDSLSGSEIQEGMKSFAEKRAPRF >Mature_264_residues TDGPSSQGGDAPSTPVLTIEGPRATIRLNRPRHLNRLQPEDLGALMALFDRVEADAGLRVLVLTGTGRAFSAGFDLGAIG GGPETSPAGGAGPSFEAVVDRLEDLALPTICRLNGGVYGGSTDLALACDFRIGVDTAEMFMPAARLGLHYYPNGIKRYVS RLGVDNAKHLFLTAEKIGAAEMLRIGYLTGMVAADALDAEVERLAALLAGNAPAAMRGMKRAINEFARGMLDDAAARRRH QDSLSGSEIQEGMKSFAEKRAPRF
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=241, Percent_Identity=25.7261410788382, Blast_Score=82, Evalue=5e-16, Organism=Escherichia coli, GI221142681, Length=255, Percent_Identity=29.8039215686275, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1787659, Length=244, Percent_Identity=27.8688524590164, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1787660, Length=252, Percent_Identity=32.1428571428571, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI87082183, Length=268, Percent_Identity=28.7313432835821, Blast_Score=78, Evalue=6e-16, Organism=Escherichia coli, GI1790281, Length=233, Percent_Identity=28.3261802575107, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788597, Length=250, Percent_Identity=25.6, Blast_Score=64, Evalue=7e-12, Organism=Caenorhabditis elegans, GI25145438, Length=243, Percent_Identity=29.6296296296296, Blast_Score=99, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17554946, Length=243, Percent_Identity=27.5720164609054, Blast_Score=94, Evalue=5e-20, Organism=Caenorhabditis elegans, GI17534483, Length=214, Percent_Identity=25.7009345794392, Blast_Score=71, Evalue=7e-13, Organism=Caenorhabditis elegans, GI17540714, Length=203, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI20129971, Length=241, Percent_Identity=29.4605809128631, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI24653477, Length=241, Percent_Identity=29.4605809128631, Blast_Score=94, Evalue=1e-19, Organism=Drosophila melanogaster, GI19922422, Length=262, Percent_Identity=24.8091603053435, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24653139, Length=270, Percent_Identity=28.5185185185185, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21357171, Length=199, Percent_Identity=27.6381909547739, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI24650670, Length=273, Percent_Identity=27.1062271062271, Blast_Score=68, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 28026; Mature: 27895
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDGPSSQGGDAPSTPVLTIEGPRATIRLNRPRHLNRLQPEDLGALMALFDRVEADAGLR CCCCCCCCCCCCCCCCEEEEECCCEEEEECCCHHCCCCCHHHHHHHHHHHHHHHCCCCCE VLVLTGTGRAFSAGFDLGAIGGGPETSPAGGAGPSFEAVVDRLEDLALPTICRLNGGVYG EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCEEC GSTDLALACDFRIGVDTAEMFMPAARLGLHYYPNGIKRYVSRLGVDNAKHLFLTAEKIGA CCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCH AEMLRIGYLTGMVAADALDAEVERLAALLAGNAPAAMRGMKRAINEFARGMLDDAAARRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HQDSLSGSEIQEGMKSFAEKRAPRF HHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TDGPSSQGGDAPSTPVLTIEGPRATIRLNRPRHLNRLQPEDLGALMALFDRVEADAGLR CCCCCCCCCCCCCCCEEEEECCCEEEEECCCHHCCCCCHHHHHHHHHHHHHHHCCCCCE VLVLTGTGRAFSAGFDLGAIGGGPETSPAGGAGPSFEAVVDRLEDLALPTICRLNGGVYG EEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCCEEC GSTDLALACDFRIGVDTAEMFMPAARLGLHYYPNGIKRYVSRLGVDNAKHLFLTAEKIGA CCCCEEEEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEHHHHCH AEMLRIGYLTGMVAADALDAEVERLAALLAGNAPAAMRGMKRAINEFARGMLDDAAARRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HQDSLSGSEIQEGMKSFAEKRAPRF HHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA