| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337990
Identifier: 146337990
GI number: 146337990
Start: 933316
End: 934134
Strand: Direct
Name: 146337990
Synonym: BRADO0882
Alternate gene names: NA
Gene position: 933316-934134 (Clockwise)
Preceding gene: 146337988
Following gene: 146337992
Centisome position: 12.52
GC content: 66.54
Gene sequence:
>819_bases ATGCTTCGCCCGCTGCTCTCGCTGCTCGCCGTCCTGGTTTCGTTTGGCTCGCCAGCGCTGGCGCAATCCGGGCCGCGCAC CAGCGAGTGCCTGGCGATGGCCGGCGAGACGCCGCGCGCGATGCCGGTCAGCCTGCGCCGCACGGCGGCGGCCGGCAACG AGGTGACGATCACCTATGCCGGCCATTCGACCTACTTCATCGACACGCCGATGGGCATCCGGATCGCCACCGACTACAGC GGCGCCTATCAGGTCGGGCGGCTGCCCGATGTCATCACGATGAACCGGGCGCATTCGACGCACTACACGCTGGCGCCCGA CCCGCGCATTCCGCACGTGCTGCGCGGCTGGGGCGAAGACGGCAAGCCGGCGCAGATCTTCGAGCGCGTCGGCGACGTGC TGATCCGCAACATCACCACCGACATCCGCCGCTATTTCAGCGACTCGCTCGGCGGAGACATGATCAAGGACGGCAACTCG ATCTTCATCTTCGAGGTCGCGGGCCTCTGCATCGGCCATCTCGGCCATCTGCACGTCAAGCTCGACGAGACGCATTTCGC CGCGATCGGCCGGCTCGACGTGGTGATGGTGCCGATCGACGGCACCTACACGATGTCGCTCGATGGCATCTCCGAGATCA CCAAGCGGCTGCGTGCCTCGGTGGTGCTGCCGATGCACCGCTTCGCGACGCCGCTCGACGAGTTCATGCGCAAGATCGGC CAGCAGTTCGAGATCGACCGCCGCACCGAGCGGTCCTTGAAGATGTCGCGCGAGCTGCTGCCGTCGAGTCCGACCGTGAT CATTCTCGACGGCGTGTAG
Upstream 100 bases:
>100_bases CGTGTTGCCGAGCCTGCCGAGATCGGCGGCCTTTGCGAGGAGGATAGTTCTGATCGGAAATCCTCGCTACACTCGCACGC GCTGTTGAAGGGGAACCGCC
Downstream 100 bases:
>100_bases CTCTATGCGCCGGCCAGGCTGGCTCCGCGGCGGCCGTCGGGCGTGACGAACATGCGCTTGAGCTTGTTGATCACGCGCAC CGCGAGGCCAAGCACGTAAG
Product: putative metal-dependent hydrolase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MLRPLLSLLAVLVSFGSPALAQSGPRTSECLAMAGETPRAMPVSLRRTAAAGNEVTITYAGHSTYFIDTPMGIRIATDYS GAYQVGRLPDVITMNRAHSTHYTLAPDPRIPHVLRGWGEDGKPAQIFERVGDVLIRNITTDIRRYFSDSLGGDMIKDGNS IFIFEVAGLCIGHLGHLHVKLDETHFAAIGRLDVVMVPIDGTYTMSLDGISEITKRLRASVVLPMHRFATPLDEFMRKIG QQFEIDRRTERSLKMSRELLPSSPTVIILDGV
Sequences:
>Translated_272_residues MLRPLLSLLAVLVSFGSPALAQSGPRTSECLAMAGETPRAMPVSLRRTAAAGNEVTITYAGHSTYFIDTPMGIRIATDYS GAYQVGRLPDVITMNRAHSTHYTLAPDPRIPHVLRGWGEDGKPAQIFERVGDVLIRNITTDIRRYFSDSLGGDMIKDGNS IFIFEVAGLCIGHLGHLHVKLDETHFAAIGRLDVVMVPIDGTYTMSLDGISEITKRLRASVVLPMHRFATPLDEFMRKIG QQFEIDRRTERSLKMSRELLPSSPTVIILDGV >Mature_272_residues MLRPLLSLLAVLVSFGSPALAQSGPRTSECLAMAGETPRAMPVSLRRTAAAGNEVTITYAGHSTYFIDTPMGIRIATDYS GAYQVGRLPDVITMNRAHSTHYTLAPDPRIPHVLRGWGEDGKPAQIFERVGDVLIRNITTDIRRYFSDSLGGDMIKDGNS IFIFEVAGLCIGHLGHLHVKLDETHFAAIGRLDVVMVPIDGTYTMSLDGISEITKRLRASVVLPMHRFATPLDEFMRKIG QQFEIDRRTERSLKMSRELLPSSPTVIILDGV
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29960; Mature: 29960
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRPLLSLLAVLVSFGSPALAQSGPRTSECLAMAGETPRAMPVSLRRTAAAGNEVTITYA CCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEE GHSTYFIDTPMGIRIATDYSGAYQVGRLPDVITMNRAHSTHYTLAPDPRIPHVLRGWGED CCEEEEEECCCCEEEEECCCCCEECCCCCCEEEECCCCCCEEEECCCCCCCHHHHCCCCC GKPAQIFERVGDVLIRNITTDIRRYFSDSLGGDMIKDGNSIFIFEVAGLCIGHLGHLHVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEHHHHHHCCCEEEEE LDETHFAAIGRLDVVMVPIDGTYTMSLDGISEITKRLRASVVLPMHRFATPLDEFMRKIG ECCCCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH QQFEIDRRTERSLKMSRELLPSSPTVIILDGV HHCCCCHHHHHHHHHHHHHCCCCCCEEEEECC >Mature Secondary Structure MLRPLLSLLAVLVSFGSPALAQSGPRTSECLAMAGETPRAMPVSLRRTAAAGNEVTITYA CCHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEEE GHSTYFIDTPMGIRIATDYSGAYQVGRLPDVITMNRAHSTHYTLAPDPRIPHVLRGWGED CCEEEEEECCCCEEEEECCCCCEECCCCCCEEEECCCCCCEEEECCCCCCCHHHHCCCCC GKPAQIFERVGDVLIRNITTDIRRYFSDSLGGDMIKDGNSIFIFEVAGLCIGHLGHLHVK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEHHHHHHCCCEEEEE LDETHFAAIGRLDVVMVPIDGTYTMSLDGISEITKRLRASVVLPMHRFATPLDEFMRKIG ECCCCEEEECCEEEEEEECCCEEEEEECCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHH QQFEIDRRTERSLKMSRELLPSSPTVIILDGV HHCCCCHHHHHHHHHHHHHCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA