| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337988
Identifier: 146337988
GI number: 146337988
Start: 930747
End: 932273
Strand: Direct
Name: 146337988
Synonym: BRADO0880
Alternate gene names: NA
Gene position: 930747-932273 (Clockwise)
Preceding gene: 146337987
Following gene: 146337990
Centisome position: 12.48
GC content: 69.55
Gene sequence:
>1527_bases ATGACGCGGGCGGCAACGCTGGCCTGGTTCGCCCGGCACGAGATCAGGCTCGCCTGGCGGGAATGGCTCGGCATGATCAC GGCCGGCCGGCGGCGCCGCACCCGCGCGGCGATCATCGGGCTCGTGCTGTTCGGCGCCATCATGCATTTGCCGGCCTGGG CCGTGGTCGGCCGCTATGCCGACCTGCAGCCGCCGCTCGACAAGACCGAGCTGATCGTGATCACCGCGACCATCATGCTG TCCTGGGCCTTGATGCTGTCGCAGGCCATCGAGTCGGTCACGCGGGTGTTCTACGCCCGCGCCGATCTCGATCTCATCAT GTCCTCGCCGGTCCGGCTCGCCGAGATCTTCTCGGTGCGCATTGCCGCGATCGCGCTCTCCGTGACCAGCATGGCGCTGC TGCTGGCGACGCCGTTCGTCGACGTGCTGCTGATCGAAGGCGGCGTCCGCTGGCTTGCTGCCTTCGTGGTCGTGGCAGCC GTGGGGCTGACGGCTGCGGCGCTGGCGATCGCAATCACCATCGTGCTGTTCCGCCTGATCGGTCCGGCGCGCACGCGGCT GGTGGCGCAGATCCTGGCCGCCGTGATCGGTGCCGGCTTCGTCATCATGCTGCAGATCGCCGCGATCGTGTCCTATGGCA CGCTGTCGCGGTTTGCCGTCCTCACCTCCGATGCCGCCGCCGCAATCGCCCCCGATCCTGACAGCCTCGTCTGGCTGCCG GCCCGTGCGGCGCTCGGCGACCCGCAGGCCTTGCTGATCCTGCTTGCGGCCGGGCTGCTGCTGCTCGGGGTCGTCATGAT GGTGTTCTCGCCGCGTTTCGCCGACACCGCGATCAGCGCCGCCGCGCAAGGCGTCTCCAGCCGCGCCGGCGCGCAGATCC GCAGCTTCCGCGGCGGCTCCCGGCAGCAGGCGCTCCGGCGCAAGGAGCTCATGCTGCTGCGGCGCGATCCCTGGCTGATC TCGCAGACGCTGATGCAGCTGCTGTATCTCGTGCCGCCGGCCCTGCTGTTGTGGCGCAGCTATTCCGACAGCTCGCAAGC GGTGATCCTGATCACGCCGGTCTTCGTCATGGCGGCGGGCCAGCTCGCCGGCGGTCTGGCCTGGCTCACGATCTCCGGCG AGGATGCGCCTGAACTCGTGGCGACGGCCCCGCTGCCGGCGGCGCGCATCGTGCGTGCAAAGATTGAGGTCGTGCTGATG ACCATCGCGGTGATTTTCGCGCCCCTGGTGGTCGCGCTCGCCTGGGTCGCGCCATGGCAGGCGCTGGTGACAGCAGCGGC GGTGCTGATCGCGACGATCTCCTCGACGGCGATCCAGCTGTGGTTCCGCATCCAGGCGCGGCGCAGCCAGTTCCGGCGCC GGCAGACCTCGTCGCGGCTCGCGACGTTCGCTGAAGCCTTCTCCTCGATCGGCTGGGCGGCGACCGCGGCGCTCGCGATC GCGCTGCCGGAAGCCGCAGTGATCTGTGGTCTGATCACCGCGGGTTTGTTGTTCGCGGCCTGGAAGCTCAGTCCGGCGAG GTCCTGA
Upstream 100 bases:
>100_bases TCGCCGAGGGCACGCTCGCCGAGCTGCGCCAGCAGAATGGCCGCACCGACACCAGCCTCGAAGAGCTGTTCATCGCCCTC GTCGATGTCGAGTCCGCGGC
Downstream 100 bases:
>100_bases TCGCGTCAGCGCAGCACCTCCATGACGGCGGCGGCGAACGCCTCCGGCTCCTCCTGCGGCAAATTGTGGCCGGCGCGCGG GATCACGCGATGCGCGACCC
Product: putative permease
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MTRAATLAWFARHEIRLAWREWLGMITAGRRRRTRAAIIGLVLFGAIMHLPAWAVVGRYADLQPPLDKTELIVITATIML SWALMLSQAIESVTRVFYARADLDLIMSSPVRLAEIFSVRIAAIALSVTSMALLLATPFVDVLLIEGGVRWLAAFVVVAA VGLTAAALAIAITIVLFRLIGPARTRLVAQILAAVIGAGFVIMLQIAAIVSYGTLSRFAVLTSDAAAAIAPDPDSLVWLP ARAALGDPQALLILLAAGLLLLGVVMMVFSPRFADTAISAAAQGVSSRAGAQIRSFRGGSRQQALRRKELMLLRRDPWLI SQTLMQLLYLVPPALLLWRSYSDSSQAVILITPVFVMAAGQLAGGLAWLTISGEDAPELVATAPLPAARIVRAKIEVVLM TIAVIFAPLVVALAWVAPWQALVTAAAVLIATISSTAIQLWFRIQARRSQFRRRQTSSRLATFAEAFSSIGWAATAALAI ALPEAAVICGLITAGLLFAAWKLSPARS
Sequences:
>Translated_508_residues MTRAATLAWFARHEIRLAWREWLGMITAGRRRRTRAAIIGLVLFGAIMHLPAWAVVGRYADLQPPLDKTELIVITATIML SWALMLSQAIESVTRVFYARADLDLIMSSPVRLAEIFSVRIAAIALSVTSMALLLATPFVDVLLIEGGVRWLAAFVVVAA VGLTAAALAIAITIVLFRLIGPARTRLVAQILAAVIGAGFVIMLQIAAIVSYGTLSRFAVLTSDAAAAIAPDPDSLVWLP ARAALGDPQALLILLAAGLLLLGVVMMVFSPRFADTAISAAAQGVSSRAGAQIRSFRGGSRQQALRRKELMLLRRDPWLI SQTLMQLLYLVPPALLLWRSYSDSSQAVILITPVFVMAAGQLAGGLAWLTISGEDAPELVATAPLPAARIVRAKIEVVLM TIAVIFAPLVVALAWVAPWQALVTAAAVLIATISSTAIQLWFRIQARRSQFRRRQTSSRLATFAEAFSSIGWAATAALAI ALPEAAVICGLITAGLLFAAWKLSPARS >Mature_507_residues TRAATLAWFARHEIRLAWREWLGMITAGRRRRTRAAIIGLVLFGAIMHLPAWAVVGRYADLQPPLDKTELIVITATIMLS WALMLSQAIESVTRVFYARADLDLIMSSPVRLAEIFSVRIAAIALSVTSMALLLATPFVDVLLIEGGVRWLAAFVVVAAV GLTAAALAIAITIVLFRLIGPARTRLVAQILAAVIGAGFVIMLQIAAIVSYGTLSRFAVLTSDAAAAIAPDPDSLVWLPA RAALGDPQALLILLAAGLLLLGVVMMVFSPRFADTAISAAAQGVSSRAGAQIRSFRGGSRQQALRRKELMLLRRDPWLIS QTLMQLLYLVPPALLLWRSYSDSSQAVILITPVFVMAAGQLAGGLAWLTISGEDAPELVATAPLPAARIVRAKIEVVLMT IAVIFAPLVVALAWVAPWQALVTAAAVLIATISSTAIQLWFRIQARRSQFRRRQTSSRLATFAEAFSSIGWAATAALAIA LPEAAVICGLITAGLLFAAWKLSPARS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54331; Mature: 54199
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRAATLAWFARHEIRLAWREWLGMITAGRRRRTRAAIIGLVLFGAIMHLPAWAVVGRYA CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLQPPLDKTELIVITATIMLSWALMLSQAIESVTRVFYARADLDLIMSSPVRLAEIFSVR CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH IAAIALSVTSMALLLATPFVDVLLIEGGVRWLAAFVVVAAVGLTAAALAIAITIVLFRLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GPARTRLVAQILAAVIGAGFVIMLQIAAIVSYGTLSRFAVLTSDAAAAIAPDPDSLVWLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEE ARAALGDPQALLILLAAGLLLLGVVMMVFSPRFADTAISAAAQGVSSRAGAQIRSFRGGS CHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCHHHHHCCCCC RQQALRRKELMLLRRDPWLISQTLMQLLYLVPPALLLWRSYSDSSQAVILITPVFVMAAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEHHHHHHHH QLAGGLAWLTISGEDAPELVATAPLPAARIVRAKIEVVLMTIAVIFAPLVVALAWVAPWQ HHHCCEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTAAAVLIATISSTAIQLWFRIQARRSQFRRRQTSSRLATFAEAFSSIGWAATAALAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ALPEAAVICGLITAGLLFAAWKLSPARS HCCHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TRAATLAWFARHEIRLAWREWLGMITAGRRRRTRAAIIGLVLFGAIMHLPAWAVVGRYA CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLQPPLDKTELIVITATIMLSWALMLSQAIESVTRVFYARADLDLIMSSPVRLAEIFSVR CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHH IAAIALSVTSMALLLATPFVDVLLIEGGVRWLAAFVVVAAVGLTAAALAIAITIVLFRLI HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GPARTRLVAQILAAVIGAGFVIMLQIAAIVSYGTLSRFAVLTSDAAAAIAPDPDSLVWLP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEE ARAALGDPQALLILLAAGLLLLGVVMMVFSPRFADTAISAAAQGVSSRAGAQIRSFRGGS CHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHCCHHHHHCCCCC RQQALRRKELMLLRRDPWLISQTLMQLLYLVPPALLLWRSYSDSSQAVILITPVFVMAAG HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCEEEEEEHHHHHHHH QLAGGLAWLTISGEDAPELVATAPLPAARIVRAKIEVVLMTIAVIFAPLVVALAWVAPWQ HHHCCEEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTAAAVLIATISSTAIQLWFRIQARRSQFRRRQTSSRLATFAEAFSSIGWAATAALAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH ALPEAAVICGLITAGLLFAAWKLSPARS HCCHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA