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The map label for this gene is csgA [H]

Identifier: 146337986

GI number: 146337986

Start: 929001

End: 929777

Strand: Reverse

Name: csgA [H]

Synonym: BRADO0878

Alternate gene names: 146337986

Gene position: 929777-929001 (Counterclockwise)

Preceding gene: 146337989

Following gene: 146337985

Centisome position: 12.47

GC content: 70.4

Gene sequence:

>777_bases
GTGACGGAGCAGCTGATCGCCAACCAGACGCGTGACGCCGCTTCGGAGGCCACGGCGCCTCGGCCTCGTCATACCGTCCG
GCTGGACTCCTTCCCGCGCGGCGGCGTCGCCGCGGTGTTCGGGGCCAGCGGCGGGATCGGCTCGGCGCTCAGCGCGGCGC
TCACCGACAGCGGCCAGTTCGATACCGTCCTCGGCTTCAGCCGCAATACGTCCCCTGCTTTCGATCTCGCCGATGAAGAC
AGCCTTGCGCGCGCCGCCGAACAGGTTGCGGGAGCCGGTGAGATCCGCCTCGTGATCATCGCCACCGGCAGGTTGCATGA
GGGCGAGATGCTGCCCGAGAAGAGCTGGCGCGAACTCGATGCAGGCCGTCTCGCCCGGGCCTTTGCCGTCAATGCAACGG
GGCCCGCGCTGGTGATGAAGCACCTGCTGCCGCAACTGCCGCGCACGGGAAAGGCGATGCTCGCGGCGCTGTCGGCGCGG
GTCGGTTCGATCGGCGACAACCGGCTTGGCGGCTGGTACGGCTATCGTGCCTCGAAGGCGGCATTGAACCAGCTGGTGCA
TTGCGCGGCCATCGAGCTTGCCCGCCGCGCGCCCGAGGCCATCTGCGTCGCGCTGCATCCGGGGACGGTGGCGACGCGGC
TCTCTGCGCCGTTCGCCTCGGCCTCAGGCATCGCCCCGGCCGAGGCCGCGCGTCATCTGCTCGGCGTCATCGATCGGCTC
GCGGCAAAGGACTCCGGCGGCTTCTTCGACTGGCGCGGCACGCCAGTGCCGTGGTGA

Upstream 100 bases:

>100_bases
CGCCTCCGCCCAGCCTAGCGCAATGATCCGAGCACGGGGCAACGTCGTTAACACGACAAGCAGCCATCATATCGGCTGCG
CGGCTCGGACGAGGATGGAC

Downstream 100 bases:

>100_bases
ACCGAACATGCCGAAGATGCGCCGCAAGTCCGACCTCCCGACCAAGATCTGCGCCGCCTGCGGCCGCCCCTTCGCGTGGC
GGCGCAAATGGGCGCGCGAC

Product: putative Short-chain dehydrogenase/reductase (SDR) family protein glucose/ribitol dehydrogenase

Products: NA

Alternate protein names: C signal [H]

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MTEQLIANQTRDAASEATAPRPRHTVRLDSFPRGGVAAVFGASGGIGSALSAALTDSGQFDTVLGFSRNTSPAFDLADED
SLARAAEQVAGAGEIRLVIIATGRLHEGEMLPEKSWRELDAGRLARAFAVNATGPALVMKHLLPQLPRTGKAMLAALSAR
VGSIGDNRLGGWYGYRASKAALNQLVHCAAIELARRAPEAICVALHPGTVATRLSAPFASASGIAPAEAARHLLGVIDRL
AAKDSGGFFDWRGTPVPW

Sequences:

>Translated_258_residues
MTEQLIANQTRDAASEATAPRPRHTVRLDSFPRGGVAAVFGASGGIGSALSAALTDSGQFDTVLGFSRNTSPAFDLADED
SLARAAEQVAGAGEIRLVIIATGRLHEGEMLPEKSWRELDAGRLARAFAVNATGPALVMKHLLPQLPRTGKAMLAALSAR
VGSIGDNRLGGWYGYRASKAALNQLVHCAAIELARRAPEAICVALHPGTVATRLSAPFASASGIAPAEAARHLLGVIDRL
AAKDSGGFFDWRGTPVPW
>Mature_257_residues
TEQLIANQTRDAASEATAPRPRHTVRLDSFPRGGVAAVFGASGGIGSALSAALTDSGQFDTVLGFSRNTSPAFDLADEDS
LARAAEQVAGAGEIRLVIIATGRLHEGEMLPEKSWRELDAGRLARAFAVNATGPALVMKHLLPQLPRTGKAMLAALSARV
GSIGDNRLGGWYGYRASKAALNQLVHCAAIELARRAPEAICVALHPGTVATRLSAPFASASGIAPAEAARHLLGVIDRLA
AKDSGGFFDWRGTPVPW

Specific function: Cell-cell signaling protein required for fruiting body morphogenesis. Necessary for cellular aggregation, for spore differentiation, and for gene expression that is initiated after 6 hour of starvation [H]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To yeast YKL071W [H]

Homologues:

Organism=Drosophila melanogaster, GI24640547, Length=148, Percent_Identity=32.4324324324324, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: NA

Molecular weight: Translated: 26939; Mature: 26808

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQLIANQTRDAASEATAPRPRHTVRLDSFPRGGVAAVFGASGGIGSALSAALTDSGQF
CCCHHHHHCHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
DTVLGFSRNTSPAFDLADEDSLARAAEQVAGAGEIRLVIIATGRLHEGEMLPEKSWRELD
CEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
AGRLARAFAVNATGPALVMKHLLPQLPRTGKAMLAALSARVGSIGDNRLGGWYGYRASKA
HHHHHHHEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALNQLVHCAAIELARRAPEAICVALHPGTVATRLSAPFASASGIAPAEAARHLLGVIDRL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AAKDSGGFFDWRGTPVPW
HHCCCCCEECCCCCCCCC
>Mature Secondary Structure 
TEQLIANQTRDAASEATAPRPRHTVRLDSFPRGGVAAVFGASGGIGSALSAALTDSGQF
CCHHHHHCHHHHHHHCCCCCCCCEEEECCCCCCCEEEEECCCCCHHHHHHHHHCCCCCC
DTVLGFSRNTSPAFDLADEDSLARAAEQVAGAGEIRLVIIATGRLHEGEMLPEKSWRELD
CEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
AGRLARAFAVNATGPALVMKHLLPQLPRTGKAMLAALSARVGSIGDNRLGGWYGYRASKA
HHHHHHHEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ALNQLVHCAAIELARRAPEAICVALHPGTVATRLSAPFASASGIAPAEAARHLLGVIDRL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
AAKDSGGFFDWRGTPVPW
HHCCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2152896; 2107980; 2118510; 1372277 [H]