| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is dhmA [H]
Identifier: 146337989
GI number: 146337989
Start: 932279
End: 933205
Strand: Reverse
Name: dhmA [H]
Synonym: BRADO0881
Alternate gene names: 146337989
Gene position: 933205-932279 (Counterclockwise)
Preceding gene: 146337991
Following gene: 146337986
Centisome position: 12.52
GC content: 68.28
Gene sequence:
>927_bases ATGAGTGATCGGGGCGGATCGTCGCAGACGCACATGATGCAACCAATCAAGGCGGTCGATGCCGGCGTCTTGAGCATCGC TTATGTAGAGAGCGGACCTTCGGACGGTCCGGTCGTGATCCTGCTGCACGGCTATCCCTACGACATCCACTCCTATATCG ACGTCGCGCCGCGCCTTGCGGCGCAGGGCTGCCGGGTCATCGTGCCCTATGTGCGCGGCTATGGGCCGACCCGCTTCCGC GATCCGTCGACGCCGCGCTCCGGCCAGCAGGCCGCCATCGGCGCCGATTTGATCGCCCTGATGGACGCGCTCGATATCGA GCGCGCGGTGTTCGCCGGCTATGACTGGGGCGGGCGCGGCGCGTGCATCGGCGCGGCTCTGTGGCCGGAGCGCTGCGCCG GGCTCGTCTCCGTCAACGGCTATCTGATCCAGGACATCGCCAAGGCGCTCAAGCCCGCGCCGGTGCCGCAGGAGTTCGCC TTCTGGTACCAATGGTACTTCCAGACCGAGCGCGGCCGTGCCGGGCTTGCGGCACACCGCGGCGAGATCGCCCGGCTGCT ATGGCAGCAATGGTCGCCGCACTGGCGCTTCGACGATGCGACCTTCGCCCGCTCCGCCGCGGCGTTCGACAATCCCGATC ACGTCGACGTCGTGATCAACAGCTATCGCCATCGATATGGCCTCGCCGAAGGCGACCCGCGCTATCAGGAGCTCGAGCGG CGGCTGGCGGCGCAGCCTGTCATCTCCGTGCCGACGATCACGCTCGACGGCGACAGTGACGGCGTGATCCCGGCGACCGA CGGCCGCGCGCATGCGGCGAAATTCAGCAACCGGGTCGCGCATCGCGTGATCCCGCGCGCCGGCCACAATTTGCCGCAGG AGGAGCCGGAGGCGTTCGCCGCCGCCGTCATGGAGGTGCTGCGCTGA
Upstream 100 bases:
>100_bases CTTCAACAGCGCGTGCGAGTGTAGCGAGGATTTCCGATCAGAACTATCCTCCTCGCAAAGGCCGCCGATCTCGGCAGGCT CGGCAACACGGGAGGAAGGC
Downstream 100 bases:
>100_bases CGCGATCAGGACCTCGCCGGACTGAGCTTCCAGGCCGCGAACAACAAACCCGCGGTGATCAGACCACAGATCACTGCGGC TTCCGGCAGCGCGATCGCGA
Product: alpha/beta family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MSDRGGSSQTHMMQPIKAVDAGVLSIAYVESGPSDGPVVILLHGYPYDIHSYIDVAPRLAAQGCRVIVPYVRGYGPTRFR DPSTPRSGQQAAIGADLIALMDALDIERAVFAGYDWGGRGACIGAALWPERCAGLVSVNGYLIQDIAKALKPAPVPQEFA FWYQWYFQTERGRAGLAAHRGEIARLLWQQWSPHWRFDDATFARSAAAFDNPDHVDVVINSYRHRYGLAEGDPRYQELER RLAAQPVISVPTITLDGDSDGVIPATDGRAHAAKFSNRVAHRVIPRAGHNLPQEEPEAFAAAVMEVLR
Sequences:
>Translated_308_residues MSDRGGSSQTHMMQPIKAVDAGVLSIAYVESGPSDGPVVILLHGYPYDIHSYIDVAPRLAAQGCRVIVPYVRGYGPTRFR DPSTPRSGQQAAIGADLIALMDALDIERAVFAGYDWGGRGACIGAALWPERCAGLVSVNGYLIQDIAKALKPAPVPQEFA FWYQWYFQTERGRAGLAAHRGEIARLLWQQWSPHWRFDDATFARSAAAFDNPDHVDVVINSYRHRYGLAEGDPRYQELER RLAAQPVISVPTITLDGDSDGVIPATDGRAHAAKFSNRVAHRVIPRAGHNLPQEEPEAFAAAVMEVLR >Mature_307_residues SDRGGSSQTHMMQPIKAVDAGVLSIAYVESGPSDGPVVILLHGYPYDIHSYIDVAPRLAAQGCRVIVPYVRGYGPTRFRD PSTPRSGQQAAIGADLIALMDALDIERAVFAGYDWGGRGACIGAALWPERCAGLVSVNGYLIQDIAKALKPAPVPQEFAF WYQWYFQTERGRAGLAAHRGEIARLLWQQWSPHWRFDDATFARSAAAFDNPDHVDVVINSYRHRYGLAEGDPRYQELERR LAAQPVISVPTITLDGDSDGVIPATDGRAHAAKFSNRVAHRVIPRAGHNLPQEEPEAFAAAVMEVLR
Specific function: Catalyzes hydrolytic cleavage of carbon-halogen bonds in halogenated aliphatic compounds, leading to the formation of the corresponding primary alcohols, halide ions and protons [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the haloalkane dehalogenase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=148, Percent_Identity=31.7567567567568, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.8.1.5 [H]
Molecular weight: Translated: 33800; Mature: 33669
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRGGSSQTHMMQPIKAVDAGVLSIAYVESGPSDGPVVILLHGYPYDIHSYIDVAPRLA CCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHH AQGCRVIVPYVRGYGPTRFRDPSTPRSGQQAAIGADLIALMDALDIERAVFAGYDWGGRG HCCCEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ACIGAALWPERCAGLVSVNGYLIQDIAKALKPAPVPQEFAFWYQWYFQTERGRAGLAAHR CEEEHHHCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCHHHHH GEIARLLWQQWSPHWRFDDATFARSAAAFDNPDHVDVVINSYRHRYGLAEGDPRYQELER HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH RLAAQPVISVPTITLDGDSDGVIPATDGRAHAAKFSNRVAHRVIPRAGHNLPQEEPEAFA HHHCCCCEECCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AAVMEVLR HHHHHHHC >Mature Secondary Structure SDRGGSSQTHMMQPIKAVDAGVLSIAYVESGPSDGPVVILLHGYPYDIHSYIDVAPRLA CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHH AQGCRVIVPYVRGYGPTRFRDPSTPRSGQQAAIGADLIALMDALDIERAVFAGYDWGGRG HCCCEEEEHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC ACIGAALWPERCAGLVSVNGYLIQDIAKALKPAPVPQEFAFWYQWYFQTERGRAGLAAHR CEEEHHHCHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCCCHHHHH GEIARLLWQQWSPHWRFDDATFARSAAAFDNPDHVDVVINSYRHRYGLAEGDPRYQELER HHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHH RLAAQPVISVPTITLDGDSDGVIPATDGRAHAAKFSNRVAHRVIPRAGHNLPQEEPEAFA HHHCCCCEECCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH AAVMEVLR HHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA