| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yajO [H]
Identifier: 146337951
GI number: 146337951
Start: 893993
End: 894943
Strand: Reverse
Name: yajO [H]
Synonym: BRADO0841
Alternate gene names: 146337951
Gene position: 894943-893993 (Counterclockwise)
Preceding gene: 146337953
Following gene: 146337950
Centisome position: 12.0
GC content: 65.93
Gene sequence:
>951_bases ATGAAGCATCGTCAGCTCGGCCGTTCCGGCCTGAATGTTCCGCCCCTCTGCTTCGGCTGCAACGTGTTCGGCTGGACGGT GGACGAGACGGCCTCGTTCCGCCTACTCGACAAGGTGGAGGACGCCGGCCTCGTTTTCCTCGACACCGCCGACGTCTATT CGCGCTGGGTGCCCGGTCACACCGGCGGCGAGTCCGAGACCATCATCGGCAAATGGATGAAGCAGCGCGGTAACCGGGAC AAGATCATCCTGGCCACCAAGGTCGGCATGGACATGGGCGACGGCAAGGTCGGGCTGAAAGCCGATTACATCGCGCGCGC GGTCGAGGACAGCTTGCGCCGGCTGCAGACCGACGTGATCGATCTCTACCAATCGCACAAGGACGACGAGGCGACGCCGC AGGAGGAGACGCTCGCCGCGTATGACAAGCTCATCAAGGCCGGCAAGGTGCGCGTGATCGGCGCCTCGAACTTCTCCGCC GAACGGCTGCAGGCCGCGCTCGACATCGCCAAGGCCAACAGCCTGCCGCGCTATGAGAGCCTGCAGCCGGACTACAGCCT GGCCGAGCGTTCGGTCTATGAAGGTGCGCTGCAGCGCGTCTGCGAGCAGAACCAAGTCGGCGTCATCACCTTCTTCTCAC TCGCCGCCGGCTTCCTCACCGGCAAGTACCGCTCCGAGGCGGATTACGGCAAGAGCCCGCGCGGCCAGCGCGGCATTCCG AAATACATGAACGAACGCGGCATGCGCATTCTTGCGGCTCTGGACGAGGTGGCGGAGGCAACCGGCGCGCAACTGGCCTC GATCGCGCTGGCCTGGCTGCTCGCCAAGCCCTCGGTGACGGCGCCGATCGCGAGCGCGACCAAGCCGGAGCATGTCGATA CCCTGGTGGCGGCGACGCAGCTGACGCTGACGCCCGATCAGGTTGCGCGGCTCGACGCCGCAAGCGCTTGA
Upstream 100 bases:
>100_bases CGCGCTGGTCAGGCGCAGCGAACGCAGGCAATCTGTCGCGGGCGCTCCGCCACACATCCAGCCAAAGATTTTATCAGCCC GTCCGAATCGAGAGATCGTC
Downstream 100 bases:
>100_bases GTTGTTAGTTCGCCCGGCGTGTGCGCGGCGCGTTGACGCAGGGCGCGGATCGCACACGCGTCATCGCACGGATGAATTTC AGCGGAGACATGGAACTGTT
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MKHRQLGRSGLNVPPLCFGCNVFGWTVDETASFRLLDKVEDAGLVFLDTADVYSRWVPGHTGGESETIIGKWMKQRGNRD KIILATKVGMDMGDGKVGLKADYIARAVEDSLRRLQTDVIDLYQSHKDDEATPQEETLAAYDKLIKAGKVRVIGASNFSA ERLQAALDIAKANSLPRYESLQPDYSLAERSVYEGALQRVCEQNQVGVITFFSLAAGFLTGKYRSEADYGKSPRGQRGIP KYMNERGMRILAALDEVAEATGAQLASIALAWLLAKPSVTAPIASATKPEHVDTLVAATQLTLTPDQVARLDAASA
Sequences:
>Translated_316_residues MKHRQLGRSGLNVPPLCFGCNVFGWTVDETASFRLLDKVEDAGLVFLDTADVYSRWVPGHTGGESETIIGKWMKQRGNRD KIILATKVGMDMGDGKVGLKADYIARAVEDSLRRLQTDVIDLYQSHKDDEATPQEETLAAYDKLIKAGKVRVIGASNFSA ERLQAALDIAKANSLPRYESLQPDYSLAERSVYEGALQRVCEQNQVGVITFFSLAAGFLTGKYRSEADYGKSPRGQRGIP KYMNERGMRILAALDEVAEATGAQLASIALAWLLAKPSVTAPIASATKPEHVDTLVAATQLTLTPDQVARLDAASA >Mature_316_residues MKHRQLGRSGLNVPPLCFGCNVFGWTVDETASFRLLDKVEDAGLVFLDTADVYSRWVPGHTGGESETIIGKWMKQRGNRD KIILATKVGMDMGDGKVGLKADYIARAVEDSLRRLQTDVIDLYQSHKDDEATPQEETLAAYDKLIKAGKVRVIGASNFSA ERLQAALDIAKANSLPRYESLQPDYSLAERSVYEGALQRVCEQNQVGVITFFSLAAGFLTGKYRSEADYGKSPRGQRGIP KYMNERGMRILAALDEVAEATGAQLASIALAWLLAKPSVTAPIASATKPEHVDTLVAATQLTLTPDQVARLDAASA
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436966, Length=325, Percent_Identity=28, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI27436964, Length=325, Percent_Identity=28, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI27436969, Length=314, Percent_Identity=28.343949044586, Blast_Score=118, Evalue=6e-27, Organism=Homo sapiens, GI4504825, Length=312, Percent_Identity=28.2051282051282, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436962, Length=325, Percent_Identity=27.6923076923077, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI27436971, Length=324, Percent_Identity=27.7777777777778, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI223718702, Length=234, Percent_Identity=32.0512820512821, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI41327764, Length=197, Percent_Identity=34.5177664974619, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI41152114, Length=234, Percent_Identity=32.4786324786325, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI223718708, Length=171, Percent_Identity=32.1637426900585, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI87081735, Length=320, Percent_Identity=36.25, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI1789375, Length=323, Percent_Identity=31.5789473684211, Blast_Score=153, Evalue=2e-38, Organism=Escherichia coli, GI1789199, Length=341, Percent_Identity=30.791788856305, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1788070, Length=329, Percent_Identity=26.7477203647416, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788081, Length=323, Percent_Identity=28.7925696594427, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI48994888, Length=305, Percent_Identity=24.2622950819672, Blast_Score=62, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6325169, Length=341, Percent_Identity=28.1524926686217, Blast_Score=116, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6323998, Length=334, Percent_Identity=28.1437125748503, Blast_Score=105, Evalue=8e-24, Organism=Saccharomyces cerevisiae, GI6319958, Length=300, Percent_Identity=28.6666666666667, Blast_Score=102, Evalue=7e-23, Organism=Saccharomyces cerevisiae, GI6319951, Length=310, Percent_Identity=26.4516129032258, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6322615, Length=263, Percent_Identity=26.9961977186312, Blast_Score=79, Evalue=8e-16, Organism=Saccharomyces cerevisiae, GI6321052, Length=163, Percent_Identity=33.7423312883436, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 34392; Mature: 34392
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHRQLGRSGLNVPPLCFGCNVFGWTVDETASFRLLDKVEDAGLVFLDTADVYSRWVPGH CCCHHHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHCCCCEEEEECHHHHHHCCCCC TGGESETIIGKWMKQRGNRDKIILATKVGMDMGDGKVGLKADYIARAVEDSLRRLQTDVI CCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DLYQSHKDDEATPQEETLAAYDKLIKAGKVRVIGASNFSAERLQAALDIAKANSLPRYES HHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC LQPDYSLAERSVYEGALQRVCEQNQVGVITFFSLAAGFLTGKYRSEADYGKSPRGQRGIP CCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH KYMNERGMRILAALDEVAEATGAQLASIALAWLLAKPSVTAPIASATKPEHVDTLVAATQ HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH LTLTPDQVARLDAASA EEECHHHHHHHHCCCC >Mature Secondary Structure MKHRQLGRSGLNVPPLCFGCNVFGWTVDETASFRLLDKVEDAGLVFLDTADVYSRWVPGH CCCHHHCCCCCCCCCEEEECCEEEEECCCCCCHHHHHHHCCCCEEEEECHHHHHHCCCCC TGGESETIIGKWMKQRGNRDKIILATKVGMDMGDGKVGLKADYIARAVEDSLRRLQTDVI CCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH DLYQSHKDDEATPQEETLAAYDKLIKAGKVRVIGASNFSAERLQAALDIAKANSLPRYES HHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCC LQPDYSLAERSVYEGALQRVCEQNQVGVITFFSLAAGFLTGKYRSEADYGKSPRGQRGIP CCCCHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH KYMNERGMRILAALDEVAEATGAQLASIALAWLLAKPSVTAPIASATKPEHVDTLVAATQ HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH LTLTPDQVARLDAASA EEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]