| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146337950
Identifier: 146337950
GI number: 146337950
Start: 892622
End: 893776
Strand: Reverse
Name: 146337950
Synonym: BRADO0840
Alternate gene names: NA
Gene position: 893776-892622 (Counterclockwise)
Preceding gene: 146337951
Following gene: 146337949
Centisome position: 11.99
GC content: 65.71
Gene sequence:
>1155_bases GTGTCGCGTGGTCGGATTTGCGCACTCGTTTCGACAATCATGCTGGCGGCCGTGTCACTGGCCGGCGGCAGTGCCCAAGC CCAGCAGCAGGCGCGTCCAGCCGCCGGCACCGCCAAGGTCGGCGATCTGCCGGACCGCGAATCGCTGAACTCCGGCACCG TGACCGTCATCACGGCGCCGATCGGCGGCCCGATGTCGGTGATGGGCTCCGACATGGCCGCGGTGCTCGACGACGGCGAG AACCTGCGCGTGCTGCCGATCCTTGGCAAGGGCTCGGCGCAGAACCTCGTCGACATCATCATGTTGAAGAACATCGACAT GGGCTTCGTCGCGACCGACGCGCTGGAATTCGTCAAGACGGAATACAACATTCCGGACATTGCCCAGCGCGTGCGCTACA TCGCGAAGCTGTTCCACAACGACGTTCACATCATCGCGCGGCGCGAGATCCGCTCGCTCGAGGATCTCAACGGCAAGCGC GTGTTCGCCGAGCGGTCGATCGGCCTGCCGGCCGCGAACACGATTTTCCGCAGGCTGGGCATTCGCGCCGATATCGATTC GGTGACCGATCCGACCGGGGGCCTGCAGAAGCTGATCGATGGCCAGGGCGATGCCTGGATCGCCTCGGTGTCGAAGGATG CGCCGATCATCAAGGGCATCAAGAACGAGGGCGGCCGGCTGCATCTCCTGCCGGTCCCGTATGACCGCGTGCTGCAGGAC ATCTATCTGCCGACGACATTCTCGTCGGAGGAATATCCCAACCTGGTGCCGGCGGGCACCAAGGTGGACGCGGTCGCGGC TTCCACGGTGCTGATGGTCTACAACTGGCCGGAGAACAGCGAGCGCTATCGCCGCACGGCGCGGTTCGTCGACGCGCTGT TCGGCAAGATCCAGGTGCTGCAGTCGCCGCCGCGGCATCCGAAATGGCGCGACACCGTGCTGTCGGCGCCGGTGCAGGGC ATGATCCGCTTCAAGGCGGCGCAGGATTGGCTCGACGGCGCGCGGGCGGTGCAATCGCCGGCTTCCGACGGCAATCCGGC CGAATTCCGCAAATTCCTCGACGAGCGCAAGGCGCAGGCGCGAATGTCGCCGGACGAGGCGGCCCGGCTCTACAGCGACT TCCTGAAATGGCAGCGGAGCAAGGAAGCGCGCTGA
Upstream 100 bases:
>100_bases GGCTTGTGCATCATCACGTGAAGAACAAAATTCGGCCCGGATCGAAATGCTAAGTGCACTGCCAAATTAGAAAGACTCAA GGAAGCGTTCGGGGGTTCGT
Downstream 100 bases:
>100_bases CGCTCGTCGCATCCCACGCTCGAGCCCGGTCGCGCGGCAAGCGCGTCCGCGGCCAGGGGCCTTGGCGAGGGATCGTCCTC GGCACCTGGTCCCGCTCGCC
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MSRGRICALVSTIMLAAVSLAGGSAQAQQQARPAAGTAKVGDLPDRESLNSGTVTVITAPIGGPMSVMGSDMAAVLDDGE NLRVLPILGKGSAQNLVDIIMLKNIDMGFVATDALEFVKTEYNIPDIAQRVRYIAKLFHNDVHIIARREIRSLEDLNGKR VFAERSIGLPAANTIFRRLGIRADIDSVTDPTGGLQKLIDGQGDAWIASVSKDAPIIKGIKNEGGRLHLLPVPYDRVLQD IYLPTTFSSEEYPNLVPAGTKVDAVAASTVLMVYNWPENSERYRRTARFVDALFGKIQVLQSPPRHPKWRDTVLSAPVQG MIRFKAAQDWLDGARAVQSPASDGNPAEFRKFLDERKAQARMSPDEAARLYSDFLKWQRSKEAR
Sequences:
>Translated_384_residues MSRGRICALVSTIMLAAVSLAGGSAQAQQQARPAAGTAKVGDLPDRESLNSGTVTVITAPIGGPMSVMGSDMAAVLDDGE NLRVLPILGKGSAQNLVDIIMLKNIDMGFVATDALEFVKTEYNIPDIAQRVRYIAKLFHNDVHIIARREIRSLEDLNGKR VFAERSIGLPAANTIFRRLGIRADIDSVTDPTGGLQKLIDGQGDAWIASVSKDAPIIKGIKNEGGRLHLLPVPYDRVLQD IYLPTTFSSEEYPNLVPAGTKVDAVAASTVLMVYNWPENSERYRRTARFVDALFGKIQVLQSPPRHPKWRDTVLSAPVQG MIRFKAAQDWLDGARAVQSPASDGNPAEFRKFLDERKAQARMSPDEAARLYSDFLKWQRSKEAR >Mature_383_residues SRGRICALVSTIMLAAVSLAGGSAQAQQQARPAAGTAKVGDLPDRESLNSGTVTVITAPIGGPMSVMGSDMAAVLDDGEN LRVLPILGKGSAQNLVDIIMLKNIDMGFVATDALEFVKTEYNIPDIAQRVRYIAKLFHNDVHIIARREIRSLEDLNGKRV FAERSIGLPAANTIFRRLGIRADIDSVTDPTGGLQKLIDGQGDAWIASVSKDAPIIKGIKNEGGRLHLLPVPYDRVLQDI YLPTTFSSEEYPNLVPAGTKVDAVAASTVLMVYNWPENSERYRRTARFVDALFGKIQVLQSPPRHPKWRDTVLSAPVQGM IRFKAAQDWLDGARAVQSPASDGNPAEFRKFLDERKAQARMSPDEAARLYSDFLKWQRSKEAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42064; Mature: 41932
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRGRICALVSTIMLAAVSLAGGSAQAQQQARPAAGTAKVGDLPDRESLNSGTVTVITAP CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC IGGPMSVMGSDMAAVLDDGENLRVLPILGKGSAQNLVDIIMLKNIDMGFVATDALEFVKT CCCCHHHHCCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH EYNIPDIAQRVRYIAKLFHNDVHIIARREIRSLEDLNGKRVFAERSIGLPAANTIFRRLG CCCCHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHC IRADIDSVTDPTGGLQKLIDGQGDAWIASVSKDAPIIKGIKNEGGRLHLLPVPYDRVLQD CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEECCHHHHHHH IYLPTTFSSEEYPNLVPAGTKVDAVAASTVLMVYNWPENSERYRRTARFVDALFGKIQVL HHCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH QSPPRHPKWRDTVLSAPVQGMIRFKAAQDWLDGARAVQSPASDGNPAEFRKFLDERKAQA CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RMSPDEAARLYSDFLKWQRSKEAR CCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SRGRICALVSTIMLAAVSLAGGSAQAQQQARPAAGTAKVGDLPDRESLNSGTVTVITAP CCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC IGGPMSVMGSDMAAVLDDGENLRVLPILGKGSAQNLVDIIMLKNIDMGFVATDALEFVKT CCCCHHHHCCCHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHH EYNIPDIAQRVRYIAKLFHNDVHIIARREIRSLEDLNGKRVFAERSIGLPAANTIFRRLG CCCCHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHC IRADIDSVTDPTGGLQKLIDGQGDAWIASVSKDAPIIKGIKNEGGRLHLLPVPYDRVLQD CCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCHHHHHHCCCCCEEEEEECCHHHHHHH IYLPTTFSSEEYPNLVPAGTKVDAVAASTVLMVYNWPENSERYRRTARFVDALFGKIQVL HHCCCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHH QSPPRHPKWRDTVLSAPVQGMIRFKAAQDWLDGARAVQSPASDGNPAEFRKFLDERKAQA CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH RMSPDEAARLYSDFLKWQRSKEAR CCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA