| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337919
Identifier: 146337919
GI number: 146337919
Start: 852784
End: 853998
Strand: Direct
Name: 146337919
Synonym: BRADO0808
Alternate gene names: NA
Gene position: 852784-853998 (Clockwise)
Preceding gene: 146337918
Following gene: 146337920
Centisome position: 11.44
GC content: 64.61
Gene sequence:
>1215_bases ATGGGCGTCGATGTTGATCTGTTCAATATCTGGAAGCAGCGGCTTCCGGCGTTTCTCGTGCATATCCAAAGAGAGACCAG TAACGGCTCGGGCGTTCAGGTCGACGCGCTCCATGTCATCACCTGCGCCCACGTGTTCGGCGAGGAAGGCGAGAACTTCT ACGCATCGCGAGGGCCGCTGGCTAACGTCATTCAACGTCGCGCCGTCGTCCGGTCTGGAAGCTTCGAAGCCGGCGGCATC GTGGTCGCGCAGCACAGCTCGCTGGATCTCGCTCTGATGCGCCTCGACCGGGCCCGGTTCGGCATCGTATCGCCGCCTTT GTTCGAGGAGAGCTATCTCGGCGTGGCGCGTGTCGTCGGCGTGCAGCGTGGCGGAGAGCGGCTCGAAGCCCTGCAGCAAC CGATCGAGCTCCGGACGGACGGCGCCTGGTGCGGCGATACGCCCACCGAGGTCAAATATGACTATGGAGCACGGGAGGGG GCCAGCGGCGGGGGAGTCTTCGCGATCCGGGCCGGCCGGCTGGTGCTCGTCGGAATTGCGCACCTTGGAGGTGAGCTGTC GCGCATGGGCGGCATCATCCCGTCGAAGGCGGTGCTCGGCTTCCTGAAGAGCGAGCTCGATTTCAAGAATCCAGCGTGGC CCGCCGGCGAGTATGAAGCGCGGCTGACGGCGGAAGGCATCGTCCCAACTCTCGAGTTGGAGGCGAAGGATTACCCGCTC AAGCTTGAATTCGCCGCGATCGCGCCGAAGGTCGATCGTAGCTGCGAGTCGATCTCCTTCGTGTGTCGGCGTGCCCTTGC TGCCAGCGAGATGAGGCTGCAAACGCCGGCACGGATGCTACCGGGTCATCGCCGCCTTGCGGCATGGGCGGGCAGGATCG AGCAGGCGGACACTGCAATCCAAGTGTTAGGCGGTGCGTTGGGCGTGAAGCTCCGGCTGCCGACGCCGGAAGAGTTGGCG TTTGCTTGGGGAGCATCAATGCCGGCAGCCAAGGCGCCGCAAGGGCGGCCGCTGACGTTGGCCGACTTCAAGCCCAATGA ACTCAGGATGCAGGTGCCTCCAGCAGGGATCTACGAGTGGGCACGCGACCGCAACGGCAATGGCTGTGCGATCGAGGCTG CGGCCGACATCGCGGGAATGCAGATCATTCCAGACGCCGAGGTCGATGCCATCGAGCCCTGCTTTCGGCCGGCCTTCGAC GCGGAGGGGCTATGA
Upstream 100 bases:
>100_bases AGCAACGATCGCGCGTTTCGACGGAGGCGCTTGCTGTTCAAGATGTCGTTCTTCGAGACGTATTTAGAGTTGTAAAGCTA TTTCATAATGAGGACGCGGC
Downstream 100 bases:
>100_bases CCGAGATCCCGCAAAGCGGCGGTCCCGAGGTGCCGTCGGGTGCGCCCGCGACGACGGGCGACGCCGTTGCCGCGCCGACG TCTGCGCCCACACGCGGCGG
Product: putative trypsin-like serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MGVDVDLFNIWKQRLPAFLVHIQRETSNGSGVQVDALHVITCAHVFGEEGENFYASRGPLANVIQRRAVVRSGSFEAGGI VVAQHSSLDLALMRLDRARFGIVSPPLFEESYLGVARVVGVQRGGERLEALQQPIELRTDGAWCGDTPTEVKYDYGAREG ASGGGVFAIRAGRLVLVGIAHLGGELSRMGGIIPSKAVLGFLKSELDFKNPAWPAGEYEARLTAEGIVPTLELEAKDYPL KLEFAAIAPKVDRSCESISFVCRRALAASEMRLQTPARMLPGHRRLAAWAGRIEQADTAIQVLGGALGVKLRLPTPEELA FAWGASMPAAKAPQGRPLTLADFKPNELRMQVPPAGIYEWARDRNGNGCAIEAAADIAGMQIIPDAEVDAIEPCFRPAFD AEGL
Sequences:
>Translated_404_residues MGVDVDLFNIWKQRLPAFLVHIQRETSNGSGVQVDALHVITCAHVFGEEGENFYASRGPLANVIQRRAVVRSGSFEAGGI VVAQHSSLDLALMRLDRARFGIVSPPLFEESYLGVARVVGVQRGGERLEALQQPIELRTDGAWCGDTPTEVKYDYGAREG ASGGGVFAIRAGRLVLVGIAHLGGELSRMGGIIPSKAVLGFLKSELDFKNPAWPAGEYEARLTAEGIVPTLELEAKDYPL KLEFAAIAPKVDRSCESISFVCRRALAASEMRLQTPARMLPGHRRLAAWAGRIEQADTAIQVLGGALGVKLRLPTPEELA FAWGASMPAAKAPQGRPLTLADFKPNELRMQVPPAGIYEWARDRNGNGCAIEAAADIAGMQIIPDAEVDAIEPCFRPAFD AEGL >Mature_403_residues GVDVDLFNIWKQRLPAFLVHIQRETSNGSGVQVDALHVITCAHVFGEEGENFYASRGPLANVIQRRAVVRSGSFEAGGIV VAQHSSLDLALMRLDRARFGIVSPPLFEESYLGVARVVGVQRGGERLEALQQPIELRTDGAWCGDTPTEVKYDYGAREGA SGGGVFAIRAGRLVLVGIAHLGGELSRMGGIIPSKAVLGFLKSELDFKNPAWPAGEYEARLTAEGIVPTLELEAKDYPLK LEFAAIAPKVDRSCESISFVCRRALAASEMRLQTPARMLPGHRRLAAWAGRIEQADTAIQVLGGALGVKLRLPTPEELAF AWGASMPAAKAPQGRPLTLADFKPNELRMQVPPAGIYEWARDRNGNGCAIEAAADIAGMQIIPDAEVDAIEPCFRPAFDA EGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43503; Mature: 43372
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVDVDLFNIWKQRLPAFLVHIQRETSNGSGVQVDALHVITCAHVFGEEGENFYASRGPL CCCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCEECCCCCH ANVIQRRAVVRSGSFEAGGIVVAQHSSLDLALMRLDRARFGIVSPPLFEESYLGVARVVG HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VQRGGERLEALQQPIELRTDGAWCGDTPTEVKYDYGAREGASGGGVFAIRAGRLVLVGIA HHCCHHHHHHHHCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEHH HLGGELSRMGGIIPSKAVLGFLKSELDFKNPAWPAGEYEARLTAEGIVPTLELEAKDYPL HHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCE KLEFAAIAPKVDRSCESISFVCRRALAASEMRLQTPARMLPGHRRLAAWAGRIEQADTAI EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHH QVLGGALGVKLRLPTPEELAFAWGASMPAAKAPQGRPLTLADFKPNELRMQVPPAGIYEW HHHHHHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCHHHHH ARDRNGNGCAIEAAADIAGMQIIPDAEVDAIEPCFRPAFDAEGL HHCCCCCCEEEEECCCCCCEEEECCCCCCHHCHHHCCCCCCCCC >Mature Secondary Structure GVDVDLFNIWKQRLPAFLVHIQRETSNGSGVQVDALHVITCAHVFGEEGENFYASRGPL CCCCHHHHHHHHHHHHEEEEEEECCCCCCCEEEEHHHHHHHHHHHCCCCCCEECCCCCH ANVIQRRAVVRSGSFEAGGIVVAQHSSLDLALMRLDRARFGIVSPPLFEESYLGVARVVG HHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VQRGGERLEALQQPIELRTDGAWCGDTPTEVKYDYGAREGASGGGVFAIRAGRLVLVGIA HHCCHHHHHHHHCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCEEEEECCCEEEEEHH HLGGELSRMGGIIPSKAVLGFLKSELDFKNPAWPAGEYEARLTAEGIVPTLELEAKDYPL HHCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCE KLEFAAIAPKVDRSCESISFVCRRALAASEMRLQTPARMLPGHRRLAAWAGRIEQADTAI EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHHHH QVLGGALGVKLRLPTPEELAFAWGASMPAAKAPQGRPLTLADFKPNELRMQVPPAGIYEW HHHHHHHEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCHHHHH ARDRNGNGCAIEAAADIAGMQIIPDAEVDAIEPCFRPAFDAEGL HHCCCCCCEEEEECCCCCCEEEECCCCCCHHCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA