| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337918
Identifier: 146337918
GI number: 146337918
Start: 850867
End: 852099
Strand: Direct
Name: 146337918
Synonym: BRADO0807
Alternate gene names: NA
Gene position: 850867-852099 (Clockwise)
Preceding gene: 146337917
Following gene: 146337919
Centisome position: 11.41
GC content: 60.91
Gene sequence:
>1233_bases ATGGCCAAGTCGGAATATATCATTCTACGCCGTATTCCATTGGGAGAGATCAGCTCGCGATCGAACGAGTTGGTTGACGC GCATGCTATCAGCAATAAGGCGCAGTCTGCTCGGCCACCATCTCGCCTGACGGTCGCCGAACTTGATGAGCGCGATGCCG GCGACCTGCGGCGCGATCCCGAAGTTTTGTTGGCACCGGCGGTGCCGCTCTCACTCATCCGTCCTTTGATCGCCAGCGAA GACTCTGATGAGAAGACATTAGATGCGGCCCGTGCTGCCGGAATATCCTGGGGTGTGCACGAGGTCGCGCCGACTGCGGC GTTGGATGATGGTGCGGCGACGACCGTGGCGATTTTGGATACGGGCATCGACGCAAGCCATGCGGCGTTCAAGGGCGTCG ATTTGCGCAGGGAAAACTTTTCGAATTCATCGAACGACGGCGACGCGAATGGTCACGGCACGCATTGCGCTGGGACTATC TTCGGTCGTGATGTTGACGGTGTCCGGATTGGCATTGCTCGCGGTGTCCGCAAGGCGCTGATCGGAAAGGTTCTGAACGA TGAGGGGCGAGGCGATACCGCGATCTTTGCGCGGGCGACGCAATGGGCGCTCGACAATGGCGCGCGGGTGATCTCGATGT CGCTTGGTTTCGACTTCAACGCTCTCTTTGAGGATCTCAAGGCCAAGGGCAATCCGCGCGCACAAGCATTTTCGATGGCG CTGTCGCATTACCGGGATACGGTACGGTTGTTCGATAGTATAATCCAGACGCTCAACGCCAGCGGTATCGTGTTGCGGAC TGGTGCAGTCGTGGTGGCCGCGGCCGGGAATGAGAGCCAACGACGCGAGACGCCGCCGTGTATTGTTGATGTCAGCCTGC CGGCAGCGGCTGAGGGTGTGGTCTCGGTTGGGGCGGTCGAAAAGAGCACGAATGGATTTGAGGTCGCATCATTCTCCAAT GCTAACGCGAAGCTGTGGGCGCCGGGGGTTGGTATCGTATCCGCAAGAGTCGGAGGAGGGCTTGCCGTTTCGCAAGGTAC CAGCATGGCGGCGCCGCATGTGTCAGGCGCAGCGGTGTTGTGGTCCGAATGGCTAGCGAGGCGCAATCCGAGGTCCGGTC CGGCTGAGCTGAAGGCGAGGCTGACCGCAAGCGCGCGAGTGACGGGGTTCTCACCGACAGTCGCAGACGCCGAGCGGGGA TCCGGGCTGATCCAGGCGCCGCCAGGCCCATAG
Upstream 100 bases:
>100_bases CACTGTCGCGGCTCTCTCATTGAGACATTAATTTTGCTGTTGATGATTCTGGTGCCTAGCTAGAACGATACCCAACATAG AAATACCGAGGTAGCCGACG
Downstream 100 bases:
>100_bases GTGCAACCACTGTGATGAGGCCGCGGGCTTGGAGAGTGCTGACTTAGGCACCTTCCCACGAGCAATGCACGCTGCCGTGC CAAGAGCGGAGGATTGCTGA
Product: putative subtilisin-like serine protease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MAKSEYIILRRIPLGEISSRSNELVDAHAISNKAQSARPPSRLTVAELDERDAGDLRRDPEVLLAPAVPLSLIRPLIASE DSDEKTLDAARAAGISWGVHEVAPTAALDDGAATTVAILDTGIDASHAAFKGVDLRRENFSNSSNDGDANGHGTHCAGTI FGRDVDGVRIGIARGVRKALIGKVLNDEGRGDTAIFARATQWALDNGARVISMSLGFDFNALFEDLKAKGNPRAQAFSMA LSHYRDTVRLFDSIIQTLNASGIVLRTGAVVVAAAGNESQRRETPPCIVDVSLPAAAEGVVSVGAVEKSTNGFEVASFSN ANAKLWAPGVGIVSARVGGGLAVSQGTSMAAPHVSGAAVLWSEWLARRNPRSGPAELKARLTASARVTGFSPTVADAERG SGLIQAPPGP
Sequences:
>Translated_410_residues MAKSEYIILRRIPLGEISSRSNELVDAHAISNKAQSARPPSRLTVAELDERDAGDLRRDPEVLLAPAVPLSLIRPLIASE DSDEKTLDAARAAGISWGVHEVAPTAALDDGAATTVAILDTGIDASHAAFKGVDLRRENFSNSSNDGDANGHGTHCAGTI FGRDVDGVRIGIARGVRKALIGKVLNDEGRGDTAIFARATQWALDNGARVISMSLGFDFNALFEDLKAKGNPRAQAFSMA LSHYRDTVRLFDSIIQTLNASGIVLRTGAVVVAAAGNESQRRETPPCIVDVSLPAAAEGVVSVGAVEKSTNGFEVASFSN ANAKLWAPGVGIVSARVGGGLAVSQGTSMAAPHVSGAAVLWSEWLARRNPRSGPAELKARLTASARVTGFSPTVADAERG SGLIQAPPGP >Mature_409_residues AKSEYIILRRIPLGEISSRSNELVDAHAISNKAQSARPPSRLTVAELDERDAGDLRRDPEVLLAPAVPLSLIRPLIASED SDEKTLDAARAAGISWGVHEVAPTAALDDGAATTVAILDTGIDASHAAFKGVDLRRENFSNSSNDGDANGHGTHCAGTIF GRDVDGVRIGIARGVRKALIGKVLNDEGRGDTAIFARATQWALDNGARVISMSLGFDFNALFEDLKAKGNPRAQAFSMAL SHYRDTVRLFDSIIQTLNASGIVLRTGAVVVAAAGNESQRRETPPCIVDVSLPAAAEGVVSVGAVEKSTNGFEVASFSNA NAKLWAPGVGIVSARVGGGLAVSQGTSMAAPHVSGAAVLWSEWLARRNPRSGPAELKARLTASARVTGFSPTVADAERGS GLIQAPPGP
Specific function: Has a broad substrate specificity with a slight preference to large hydrophobic amino acid residues at the P1 position [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6324576, Length=310, Percent_Identity=28.7096774193548, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 - InterPro: IPR009020 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 42705; Mature: 42574
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00136 SUBTILASE_ASP ; PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSEYIILRRIPLGEISSRSNELVDAHAISNKAQSARPPSRLTVAELDERDAGDLRRDP CCCCCEEEEEECCCCCCCCCCCCEEEHHHHHCHHHCCCCCCCEEEECCCCCCCCCCCCCC EVLLAPAVPLSLIRPLIASEDSDEKTLDAARAAGISWGVHEVAPTAALDDGAATTVAILD CEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEEE TGIDASHAAFKGVDLRRENFSNSSNDGDANGHGTHCAGTIFGRDVDGVRIGIARGVRKAL CCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHH IGKVLNDEGRGDTAIFARATQWALDNGARVISMSLGFDFNALFEDLKAKGNPRAQAFSMA HHHHHCCCCCCCEEEEEEHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHH LSHYRDTVRLFDSIIQTLNASGIVLRTGAVVVAAAGNESQRRETPPCIVDVSLPAAAEGV HHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEECCCCHHHCCCCCEEEEECCCCCCCCC VSVGAVEKSTNGFEVASFSNANAKLWAPGVGIVSARVGGGLAVSQGTSMAAPHVSGAAVL EEECCEECCCCCEEEEEECCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCHHHH WSEWLARRNPRSGPAELKARLTASARVTGFSPTVADAERGSGLIQAPPGP HHHHHHHCCCCCCHHHHHHEEEEEEEEECCCCCCCCHHHCCCEEECCCCC >Mature Secondary Structure AKSEYIILRRIPLGEISSRSNELVDAHAISNKAQSARPPSRLTVAELDERDAGDLRRDP CCCCEEEEEECCCCCCCCCCCCEEEHHHHHCHHHCCCCCCCEEEECCCCCCCCCCCCCC EVLLAPAVPLSLIRPLIASEDSDEKTLDAARAAGISWGVHEVAPTAALDDGAATTVAILD CEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCEEEEEEE TGIDASHAAFKGVDLRRENFSNSSNDGDANGHGTHCAGTIFGRDVDGVRIGIARGVRKAL CCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHH IGKVLNDEGRGDTAIFARATQWALDNGARVISMSLGFDFNALFEDLKAKGNPRAQAFSMA HHHHHCCCCCCCEEEEEEHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHH LSHYRDTVRLFDSIIQTLNASGIVLRTGAVVVAAAGNESQRRETPPCIVDVSLPAAAEGV HHHHHHHHHHHHHHHHHHCCCCEEEEECEEEEEECCCCHHHCCCCCEEEEECCCCCCCCC VSVGAVEKSTNGFEVASFSNANAKLWAPGVGIVSARVGGGLAVSQGTSMAAPHVSGAAVL EEECCEECCCCCEEEEEECCCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCHHHH WSEWLARRNPRSGPAELKARLTASARVTGFSPTVADAERGSGLIQAPPGP HHHHHHHCCCCCCHHHHHHEEEEEEEEECCCCCCCCHHHCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11375149 [H]