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The map label for this gene is ugpB [H]

Identifier: 146337277

GI number: 146337277

Start: 119646

End: 120887

Strand: Direct

Name: ugpB [H]

Synonym: BRADO0104

Alternate gene names: 146337277

Gene position: 119646-120887 (Clockwise)

Preceding gene: 146337276

Following gene: 146337278

Centisome position: 1.6

GC content: 62.88

Gene sequence:

>1242_bases
GTGACCGAAATCCAGTGGTGGCACGCCATGACCGGCGGCAACAACGACATCGTCAACAAGCTCGCCGAAGACTTCAACGC
GTCGCAGAGCGACTACAAGGTCGTCCCGACCTTCAAGGGCAGCTATCCCGACACGATGAACGCCGGCATCGCCGCCTTCC
GCGCCGGCACCGCGCCGCACATTCTGCAGGTGTTCGAGGTCGGCACTGCGACGATGATGAGCGCCAAGGGCGCGATCAAG
CCGGTCTACGAGCTGATGAAGGACGCCGGCGAGCCGTTCGATCCGAAGGCCTATCTGCCGGCCATCACTGGCTACTACTC
GACGTCGAAGGGCGACATGCTGTCGTTTCCGTTCAACTCGTCCTCGATGGTGATGTGGATCAACAAGGACGAATTGAAGA
AGGCGGGAATCGCCGAGATCCCGAAGACCTGGCCGGAGGTGTTCGACGCGGCGAAGAAGCTGAAGGCGGCCGGGCACGAG
ACCTGCGGCTTCTCCAACGCCTGGGCGACCTGGGCGCATATCGAGCAGTTCTCCGCCTGGCACAACGTGCCGATCGGCAC
CAAGGCCAACGGCCTCGACGGTTTCGACACGGTGCTCGAATTCAATTCGCCGCTCGCGGTCAAGCACCTGCAGAACCTGA
TCGACCTGCAGAAGGACAAGACCTACGACTATTCCGGCCGCGGCAACCAGAGCGAAAGCCGCTTCGGCACCGGCGAATGC
GCGATCTTCCTCACGTCCTCCGGCTACTACGCCACCGCCAAGAGCACAGCGAAGTTCGACTTCACCTCGGCGCCGATGCC
GTATTATCCGGACGTCCAGGGCGCCCCGCAGAACTCGATCATCGGAGGCGCGTCGCTGTGGGTGATGGGCGGCAAGTCGG
CCGACGAGTACAAGGGCGTCGCCAAGTTCTTCACCTTCCTGTCCGACACCAACCGGCAGGCCAAGCTGCATCAGGAATCC
GGCTATCTGCCGATCACCAAGGCGGCCTATGAGAAGACCAAGGCCGACGGCTTCTACGAGAAGAACCCGACCCTGCAGAC
GCCGCTGAAGGAGCTCACCAACAAGGAGCCGACCGAGAATTCGCGCGGCCTGCGCTTCGGCAACATGGTGCAGATGCGCG
ACGTCTGGGCCGAGGAGATCGAGGCGGCGCTGGCCGGCAAGAAGACCGCCAAGGACGCACTTGATGCCGCCGTCGCGCGG
GGCAACGCGATGTTGCGCAGCTTCGAGAAAACGGCCAAGTAA

Upstream 100 bases:

>100_bases
GACGTTCCCTGGGAGGATCCTTTTGATGTCTCTTCGACAATTGGCTGCTGCCGCCCTGATTTCGGCGACCTTTGGTTTTG
CTGTTTCGCCCGCACACGCT

Downstream 100 bases:

>100_bases
GATCGCCCGGACGGGCTCCTCCTCCAATAGGTGGAGGAGCCCTGTCGTCCGTCCCTCCTGCGGCGTCCTCGATGGAAAAG
TCAGTCGTCTTCAAAGGCAA

Product: putative sugar ABC transporter substrate binding protein glycerol 3-phosphate transport protein, ugpB-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTEIQWWHAMTGGNNDIVNKLAEDFNASQSDYKVVPTFKGSYPDTMNAGIAAFRAGTAPHILQVFEVGTATMMSAKGAIK
PVYELMKDAGEPFDPKAYLPAITGYYSTSKGDMLSFPFNSSSMVMWINKDELKKAGIAEIPKTWPEVFDAAKKLKAAGHE
TCGFSNAWATWAHIEQFSAWHNVPIGTKANGLDGFDTVLEFNSPLAVKHLQNLIDLQKDKTYDYSGRGNQSESRFGTGEC
AIFLTSSGYYATAKSTAKFDFTSAPMPYYPDVQGAPQNSIIGGASLWVMGGKSADEYKGVAKFFTFLSDTNRQAKLHQES
GYLPITKAAYEKTKADGFYEKNPTLQTPLKELTNKEPTENSRGLRFGNMVQMRDVWAEEIEAALAGKKTAKDALDAAVAR
GNAMLRSFEKTAK

Sequences:

>Translated_413_residues
MTEIQWWHAMTGGNNDIVNKLAEDFNASQSDYKVVPTFKGSYPDTMNAGIAAFRAGTAPHILQVFEVGTATMMSAKGAIK
PVYELMKDAGEPFDPKAYLPAITGYYSTSKGDMLSFPFNSSSMVMWINKDELKKAGIAEIPKTWPEVFDAAKKLKAAGHE
TCGFSNAWATWAHIEQFSAWHNVPIGTKANGLDGFDTVLEFNSPLAVKHLQNLIDLQKDKTYDYSGRGNQSESRFGTGEC
AIFLTSSGYYATAKSTAKFDFTSAPMPYYPDVQGAPQNSIIGGASLWVMGGKSADEYKGVAKFFTFLSDTNRQAKLHQES
GYLPITKAAYEKTKADGFYEKNPTLQTPLKELTNKEPTENSRGLRFGNMVQMRDVWAEEIEAALAGKKTAKDALDAAVAR
GNAMLRSFEKTAK
>Mature_412_residues
TEIQWWHAMTGGNNDIVNKLAEDFNASQSDYKVVPTFKGSYPDTMNAGIAAFRAGTAPHILQVFEVGTATMMSAKGAIKP
VYELMKDAGEPFDPKAYLPAITGYYSTSKGDMLSFPFNSSSMVMWINKDELKKAGIAEIPKTWPEVFDAAKKLKAAGHET
CGFSNAWATWAHIEQFSAWHNVPIGTKANGLDGFDTVLEFNSPLAVKHLQNLIDLQKDKTYDYSGRGNQSESRFGTGECA
IFLTSSGYYATAKSTAKFDFTSAPMPYYPDVQGAPQNSIIGGASLWVMGGKSADEYKGVAKFFTFLSDTNRQAKLHQESG
YLPITKAAYEKTKADGFYEKNPTLQTPLKELTNKEPTENSRGLRFGNMVQMRDVWAEEIEAALAGKKTAKDALDAAVARG
NAMLRSFEKTAK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=416, Percent_Identity=51.2019230769231, Blast_Score=423, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45345; Mature: 45214

Theoretical pI: Translated: 7.21; Mature: 7.21

Prosite motif: PS00059 ADH_ZINC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIQWWHAMTGGNNDIVNKLAEDFNASQSDYKVVPTFKGSYPDTMNAGIAAFRAGTAPH
CCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHH
ILQVFEVGTATMMSAKGAIKPVYELMKDAGEPFDPKAYLPAITGYYSTSKGDMLSFPFNS
HHHHHHHCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCEECCCCCEEECCCCC
SSMVMWINKDELKKAGIAEIPKTWPEVFDAAKKLKAAGHETCGFSNAWATWAHIEQFSAW
CCEEEEEEHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
HNVPIGTKANGLDGFDTVLEFNSPLAVKHLQNLIDLQKDKTYDYSGRGNQSESRFGTGEC
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
AIFLTSSGYYATAKSTAKFDFTSAPMPYYPDVQGAPQNSIIGGASLWVMGGKSADEYKGV
EEEEECCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHH
AKFFTFLSDTNRQAKLHQESGYLPITKAAYEKTKADGFYEKNPTLQTPLKELTNKEPTEN
HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC
SRGLRFGNMVQMRDVWAEEIEAALAGKKTAKDALDAAVARGNAMLRSFEKTAK
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TEIQWWHAMTGGNNDIVNKLAEDFNASQSDYKVVPTFKGSYPDTMNAGIAAFRAGTAPH
CCEEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCCHH
ILQVFEVGTATMMSAKGAIKPVYELMKDAGEPFDPKAYLPAITGYYSTSKGDMLSFPFNS
HHHHHHHCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCEECCCCCEEECCCCC
SSMVMWINKDELKKAGIAEIPKTWPEVFDAAKKLKAAGHETCGFSNAWATWAHIEQFSAW
CCEEEEEEHHHHHHCCCHHCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
HNVPIGTKANGLDGFDTVLEFNSPLAVKHLQNLIDLQKDKTYDYSGRGNQSESRFGTGEC
CCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCE
AIFLTSSGYYATAKSTAKFDFTSAPMPYYPDVQGAPQNSIIGGASLWVMGGKSADEYKGV
EEEEECCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCEECCCEEEEECCCCCHHHHHH
AKFFTFLSDTNRQAKLHQESGYLPITKAAYEKTKADGFYEKNPTLQTPLKELTNKEPTEN
HHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCC
SRGLRFGNMVQMRDVWAEEIEAALAGKKTAKDALDAAVARGNAMLRSFEKTAK
CCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA