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The map label for this gene is rimP [H]

Identifier: 146337224

GI number: 146337224

Start: 56773

End: 57474

Strand: Direct

Name: rimP [H]

Synonym: BRADO0050

Alternate gene names: 146337224

Gene position: 56773-57474 (Clockwise)

Preceding gene: 146337222

Following gene: 146337225

Centisome position: 0.76

GC content: 68.38

Gene sequence:

>702_bases
GTGGAGCCGGGCGTTGCGGCGCGTGTCGCGGCGGTGGCCGACCCGGTGCTGCAGGGAATGGGTTACCGGCTGGTGCGGAT
CCGCATCTCCGGCGAATCCGGCTGCACCGTCCAGGTGATGGCCGAGCGCCCCGACGGCACCATGCAGATCGAGGATTGCG
AGGCGGTGTCGCGGGCGCTGTCGCCAGTGCTGGACATCGCCGACCCGATCGACCGCGCCTACCGGCTCGAGATCTCCTCG
CCGGGCATCGACCGGCCGCTGGTCCGTCGCTCCGATTTCGAGCGCCATGTCGGTCATCTCGTGAAGATCGAGATGGCCGT
GGCGTATCAGAACCGCAAGCGCTTCCGCGGCATCATCAAGGGTGTCGAAGGCGACGGCGTACGCATCACCCGCGACGACG
TCGCCAAGGACGCCGACCCCGATGTCGTGCTGCCGATGGCCGACATCGGCGACGCCAAAATGGTTCTGACCGACGAGCTG
ATCGCCGAGTCGATGCGCCGCGGCAAGGCGGCCGAGCGCGAAAAGAAGCGTGACCTTGGGCTCGCTCCGCCGCTTGCGCC
GCACGCCAAGCCGGCGGCCCAGGCCAAGCCGAAGCCGAAAGCCAAGGACGGCAAGCCGGCCAAGAAGCCGCTGCCGACCG
ACACCAAGAAGCATCGCCTCGCCGCCGATCGTGCGCGCAGAGGCGAGATCGATCCTGATTAG

Upstream 100 bases:

>100_bases
AAGGCGGCCGAAACAAGCAAGACAAGCGATCGACGCCTCGATGACGGAACCGACCCTCGCAGCCGCAGACACCGACCTTC
TGACCGAGCCCCGGCTCGTC

Downstream 100 bases:

>100_bases
AGGAGATTTGAGCCATGGCCGTCAGCGCCAACCGGTTGGAACTGCTGCAGATCGCCGACGCCGTCGCGCGCGAGAAGTCG
ATCGACCGCGGCATCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MEPGVAARVAAVADPVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRALSPVLDIADPIDRAYRLEISS
PGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIKGVEGDGVRITRDDVAKDADPDVVLPMADIGDAKMVLTDEL
IAESMRRGKAAEREKKRDLGLAPPLAPHAKPAAQAKPKPKAKDGKPAKKPLPTDTKKHRLAADRARRGEIDPD

Sequences:

>Translated_233_residues
MEPGVAARVAAVADPVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRALSPVLDIADPIDRAYRLEISS
PGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIKGVEGDGVRITRDDVAKDADPDVVLPMADIGDAKMVLTDEL
IAESMRRGKAAEREKKRDLGLAPPLAPHAKPAAQAKPKPKAKDGKPAKKPLPTDTKKHRLAADRARRGEIDPD
>Mature_233_residues
MEPGVAARVAAVADPVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRALSPVLDIADPIDRAYRLEISS
PGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIKGVEGDGVRITRDDVAKDADPDVVLPMADIGDAKMVLTDEL
IAESMRRGKAAEREKKRDLGLAPPLAPHAKPAAQAKPKPKAKDGKPAKKPLPTDTKKHRLAADRARRGEIDPD

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=139, Percent_Identity=35.2517985611511, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 25444; Mature: 25444

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPGVAARVAAVADPVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRAL
CCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHH
SPVLDIADPIDRAYRLEISSPGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIK
HHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHC
GVEGDGVRITRDDVAKDADPDVVLPMADIGDAKMVLTDELIAESMRRGKAAEREKKRDLG
CCCCCCEEEEHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCC
LAPPLAPHAKPAAQAKPKPKAKDGKPAKKPLPTDTKKHRLAADRARRGEIDPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MEPGVAARVAAVADPVLQGMGYRLVRIRISGESGCTVQVMAERPDGTMQIEDCEAVSRAL
CCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEECCCCCEEEHHHHHHHHHH
SPVLDIADPIDRAYRLEISSPGIDRPLVRRSDFERHVGHLVKIEMAVAYQNRKRFRGIIK
HHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHC
GVEGDGVRITRDDVAKDADPDVVLPMADIGDAKMVLTDELIAESMRRGKAAEREKKRDLG
CCCCCCEEEEHHHHCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHCCC
LAPPLAPHAKPAAQAKPKPKAKDGKPAKKPLPTDTKKHRLAADRARRGEIDPD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA