| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is glsA1 [H]
Identifier: 146337200
GI number: 146337200
Start: 29960
End: 32164
Strand: Direct
Name: glsA1 [H]
Synonym: BRADO0026
Alternate gene names: 146337200
Gene position: 29960-32164 (Clockwise)
Preceding gene: 146337197
Following gene: 146337201
Centisome position: 0.4
GC content: 67.07
Gene sequence:
>2205_bases GTGAACAAGACCCTGACGGCCGGTCGCGCCGATCCCATCTTGCGACGCGGTATGGATGATATTCTGGGCGGTTCGGCCGC CAGCGTCCTGACCGTCACGTACGGCCTGTCCTATTCGCTGCTGATCTTCGCCGGACCGCTCGCGCCCTATCTCGGCCAGG GCATCGGGATCACCTTCATGGTCTCGGCGGTGATGGCGCTGGTGCTGGGACTCGGCAGTTCGCTGCCGTTTGCGATCGGC GCGCCCGACAGCTCGACGGCAGCCGTCACGGCCATCCTGGCGTCGTCGCTGGCCGAGCGCATCATCACCGCCGATCCCGG CGCGTCGCCGTTCATGCCGGTCGTCATCACGCTCGGGCTGACCAGCCTCGTCACCGGCCTCGTGCTGTGGATCTGCGGCA TCAACCGGCTCGGACGCACGATCCGCTACGTGCCCTATCCCGTGGTCGGCGGCTTCCTCGGCGCCACCGGCGCGCTGATC GTGATCGGCGCGATCGGGGTGATCACCGGGCACCGGCTGCAGCTCTCGACCCTGCCCGCATTCGGCAACGCGCAGACCAG CTATGAGCTCGCCGCCGCCGCGGCGATGGCGATGCTGCTCTATCTGACCTGGCACCGGTCACGCAATCCGTTCGGCCTGC CCGTGATCCTGGTCAGCGGCACGATCGCGGCTCATCTCGGGTTCTGGCTGTGCGGCATTACGCCCGCCGAGGCGCAGGCG ACGGGCTGGACTTTCCAGCCGCCGCCACAAGTCGCGCTGGTGTGGCCCTGGACGGCGGATGCGCTCGGCGCCTATCCGTG GGCGGCGCTGTCCGACCTGTCGGGCAATATCGTCGCCGTGATCTTCGTCACCGCGGCGAGCACGCTGTTCAACACCGCGG GGATCGAGGTCGCGACCCATCGCGAAGCCGATGTCGAGCGCGAGCTCGCGGTCACCGGCGTCGCCAACGCGCTTGCCGGC GTCCTCGGCGGCTACACCGGCTGCATCTCCATCAGCCGCTCCGTGCTCAACGTCAAGGCCGGCGGCACCGGCCGGATCTC CGGCCTCACCGTCGCAGCCATCTCGGCGCTGATGCTCGCGCTGTCGCAGCCGCTGCTCGGTTACATGCCGAAATTCGTGC TCGGCGGCCTGCTGCTCTATCTCGGCGCGGACACGCTGCACAAATGGGCCGTACAGTCGCGCCGGCGACTCTCGAAGACC GACTACGCTTCGCTGCTGCTGATCATCGCGATCATCCTGCAATGGGGCTTCATCGCCGGAATCCTGATCGGCGTCGTCAT CGGCTGCGCCGCGTTCGCGCTGAGCGCCTCGCGCATCAGCGCCGTCAAATATGGGTTCGACGGCAGTGAATATCGCTCAT CGCTCGATCGATCGCGCGATCATCAGGCGCTGCTGATGGCGCAGGGACGCGAGATCCAGGGACTGAGCCTGCAGAGCTAT CTGTTCTTCGGTTCGGCGAACCGGCTCTATCAGCAGGTCAAGCTGCTGTTATCACGCCGCGCGGAATGCCGCTTCCTGGT GTTCGACTTCAAGCTCGTGACCGGCATCGATTCCTCCGCCGCCTACAGCTTCGCGCAGATCAAGCGGCTCGCGCTGGAGC GCGACGTCAAGCTGGTGCTCGTGCACCTGCCGCGCGCCGTCGAACGCACGCTGCGCGCCAGCGAATTCATCAGCAAGGAC GTGCTGATCGCGCCCGAGCTCGATCATGCGCTGGAATGGTGCGAGAACACGATCATCCAAAGCCACCACGAGCATGCCCA GGACGAGGCGTCGCTGCGCGACTGGTTCGCGCGCATCCTCGGCAGCGACGACGAGGCGGACGAACTGATGAGCCGGTGTA TCCGGCTCGACGTCGGTGCCGGGACCACGGTGGTGCGCGCCGGCGAGCCGGCCGCCTCGATGCACTTCATCCTCGACGGC CGCGTGGGGATCATGGTGCCGGCGGAGCATGGCGGCACGACCCGGGTGCGCAGTCTCGGCCGCTACACGACGATCGGGGA GATGGGGCTGATCGCGCAGACCCCGCGCAGCGCCACCATCCAGGCCGAGACCGACAGCGTGCTCTACGAGCTCACCATCG CGCAATTCGACGCGATCTCGCGCGAGCACCCGGCACTGGCGCAGAAGCTGTTGACCTATTTCATGACGATCATGGCGGAG CGACTGAGCTTCGCCAACCGCACCATCGCCGTGCTGCGACGTTAG
Upstream 100 bases:
>100_bases GTCGCATGCCGGCGAGAACGATGCCCATGTCACAAATTTGCACTTGCGCGACGCGGGCGCGGGCCGCACGAGTGAGCCAT TGGTTAGAGGCATATTCGAC
Downstream 100 bases:
>100_bases GTCACCGCGCCGACCGGGGGGCCGGGACGGCTATTAATCTCCTGGTAACCGGTCGGGCGTACGCCTCGACCAGACATTGT TCGCAACGATCGGAAACATG
Product: sulfate transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MNKTLTAGRADPILRRGMDDILGGSAASVLTVTYGLSYSLLIFAGPLAPYLGQGIGITFMVSAVMALVLGLGSSLPFAIG APDSSTAAVTAILASSLAERIITADPGASPFMPVVITLGLTSLVTGLVLWICGINRLGRTIRYVPYPVVGGFLGATGALI VIGAIGVITGHRLQLSTLPAFGNAQTSYELAAAAAMAMLLYLTWHRSRNPFGLPVILVSGTIAAHLGFWLCGITPAEAQA TGWTFQPPPQVALVWPWTADALGAYPWAALSDLSGNIVAVIFVTAASTLFNTAGIEVATHREADVERELAVTGVANALAG VLGGYTGCISISRSVLNVKAGGTGRISGLTVAAISALMLALSQPLLGYMPKFVLGGLLLYLGADTLHKWAVQSRRRLSKT DYASLLLIIAIILQWGFIAGILIGVVIGCAAFALSASRISAVKYGFDGSEYRSSLDRSRDHQALLMAQGREIQGLSLQSY LFFGSANRLYQQVKLLLSRRAECRFLVFDFKLVTGIDSSAAYSFAQIKRLALERDVKLVLVHLPRAVERTLRASEFISKD VLIAPELDHALEWCENTIIQSHHEHAQDEASLRDWFARILGSDDEADELMSRCIRLDVGAGTTVVRAGEPAASMHFILDG RVGIMVPAEHGGTTRVRSLGRYTTIGEMGLIAQTPRSATIQAETDSVLYELTIAQFDAISREHPALAQKLLTYFMTIMAE RLSFANRTIAVLRR
Sequences:
>Translated_734_residues MNKTLTAGRADPILRRGMDDILGGSAASVLTVTYGLSYSLLIFAGPLAPYLGQGIGITFMVSAVMALVLGLGSSLPFAIG APDSSTAAVTAILASSLAERIITADPGASPFMPVVITLGLTSLVTGLVLWICGINRLGRTIRYVPYPVVGGFLGATGALI VIGAIGVITGHRLQLSTLPAFGNAQTSYELAAAAAMAMLLYLTWHRSRNPFGLPVILVSGTIAAHLGFWLCGITPAEAQA TGWTFQPPPQVALVWPWTADALGAYPWAALSDLSGNIVAVIFVTAASTLFNTAGIEVATHREADVERELAVTGVANALAG VLGGYTGCISISRSVLNVKAGGTGRISGLTVAAISALMLALSQPLLGYMPKFVLGGLLLYLGADTLHKWAVQSRRRLSKT DYASLLLIIAIILQWGFIAGILIGVVIGCAAFALSASRISAVKYGFDGSEYRSSLDRSRDHQALLMAQGREIQGLSLQSY LFFGSANRLYQQVKLLLSRRAECRFLVFDFKLVTGIDSSAAYSFAQIKRLALERDVKLVLVHLPRAVERTLRASEFISKD VLIAPELDHALEWCENTIIQSHHEHAQDEASLRDWFARILGSDDEADELMSRCIRLDVGAGTTVVRAGEPAASMHFILDG RVGIMVPAEHGGTTRVRSLGRYTTIGEMGLIAQTPRSATIQAETDSVLYELTIAQFDAISREHPALAQKLLTYFMTIMAE RLSFANRTIAVLRR >Mature_734_residues MNKTLTAGRADPILRRGMDDILGGSAASVLTVTYGLSYSLLIFAGPLAPYLGQGIGITFMVSAVMALVLGLGSSLPFAIG APDSSTAAVTAILASSLAERIITADPGASPFMPVVITLGLTSLVTGLVLWICGINRLGRTIRYVPYPVVGGFLGATGALI VIGAIGVITGHRLQLSTLPAFGNAQTSYELAAAAAMAMLLYLTWHRSRNPFGLPVILVSGTIAAHLGFWLCGITPAEAQA TGWTFQPPPQVALVWPWTADALGAYPWAALSDLSGNIVAVIFVTAASTLFNTAGIEVATHREADVERELAVTGVANALAG VLGGYTGCISISRSVLNVKAGGTGRISGLTVAAISALMLALSQPLLGYMPKFVLGGLLLYLGADTLHKWAVQSRRRLSKT DYASLLLIIAIILQWGFIAGILIGVVIGCAAFALSASRISAVKYGFDGSEYRSSLDRSRDHQALLMAQGREIQGLSLQSY LFFGSANRLYQQVKLLLSRRAECRFLVFDFKLVTGIDSSAAYSFAQIKRLALERDVKLVLVHLPRAVERTLRASEFISKD VLIAPELDHALEWCENTIIQSHHEHAQDEASLRDWFARILGSDDEADELMSRCIRLDVGAGTTVVRAGEPAASMHFILDG RVGIMVPAEHGGTTRVRSLGRYTTIGEMGLIAQTPRSATIQAETDSVLYELTIAQFDAISREHPALAQKLLTYFMTIMAE RLSFANRTIAVLRR
Specific function: Possible Sulfate Transporter. [C]
COG id: COG0659
COG function: function code P; Sulfate permease and related transporters (MFS superfamily)
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 STAS domain [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321564, Length=582, Percent_Identity=23.7113402061856, Blast_Score=163, Evalue=7e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR018490 - InterPro: IPR000595 - InterPro: IPR015868 - InterPro: IPR014710 - InterPro: IPR002645 [H]
Pfam domain/function: PF00027 cNMP_binding; PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 78418; Mature: 78418
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS00889 CNMP_BINDING_2 ; PS50042 CNMP_BINDING_3 ; PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLTAGRADPILRRGMDDILGGSAASVLTVTYGLSYSLLIFAGPLAPYLGQGIGITFM CCCCCCCCCCCHHHHCCHHHHHCCCHHHHHEEECCCCEEEEEEECHHHHHHCCCCCHHHH VSAVMALVLGLGSSLPFAIGAPDSSTAAVTAILASSLAERIITADPGASPFMPVVITLGL HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH TSLVTGLVLWICGINRLGRTIRYVPYPVVGGFLGATGALIVIGAIGVITGHRLQLSTLPA HHHHHHHHHHHHCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC FGNAQTSYELAAAAAMAMLLYLTWHRSRNPFGLPVILVSGTIAAHLGFWLCGITPAEAQA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCC TGWTFQPPPQVALVWPWTADALGAYPWAALSDLSGNIVAVIFVTAASTLFNTAGIEVATH CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEC READVERELAVTGVANALAGVLGGYTGCISISRSVLNVKAGGTGRISGLTVAAISALMLA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHH LSQPLLGYMPKFVLGGLLLYLGADTLHKWAVQSRRRLSKTDYASLLLIIAIILQWGFIAG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH ILIGVVIGCAAFALSASRISAVKYGFDGSEYRSSLDRSRDHQALLMAQGREIQGLSLQSY HHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCHHEECCCCCCCCCHHHH LFFGSANRLYQQVKLLLSRRAECRFLVFDFKLVTGIDSSAAYSFAQIKRLALERDVKLVL EEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE VHLPRAVERTLRASEFISKDVLIAPELDHALEWCENTIIQSHHEHAQDEASLRDWFARIL ECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSDDEADELMSRCIRLDVGAGTTVVRAGEPAASMHFILDGRVGIMVPAEHGGTTRVRSLG CCCCCHHHHHHHHHEEECCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCHHHHHHCC RYTTIGEMGLIAQTPRSATIQAETDSVLYELTIAQFDAISREHPALAQKLLTYFMTIMAE CCCCCCCCCCEEECCCCCEEEECCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLSFANRTIAVLRR HHHHCCCHHHHHCC >Mature Secondary Structure MNKTLTAGRADPILRRGMDDILGGSAASVLTVTYGLSYSLLIFAGPLAPYLGQGIGITFM CCCCCCCCCCCHHHHCCHHHHHCCCHHHHHEEECCCCEEEEEEECHHHHHHCCCCCHHHH VSAVMALVLGLGSSLPFAIGAPDSSTAAVTAILASSLAERIITADPGASPFMPVVITLGL HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHH TSLVTGLVLWICGINRLGRTIRYVPYPVVGGFLGATGALIVIGAIGVITGHRLQLSTLPA HHHHHHHHHHHHCHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCC FGNAQTSYELAAAAAMAMLLYLTWHRSRNPFGLPVILVSGTIAAHLGFWLCGITPAEAQA CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCC TGWTFQPPPQVALVWPWTADALGAYPWAALSDLSGNIVAVIFVTAASTLFNTAGIEVATH CCCCCCCCCCEEEECCCCHHHHCCCCCHHHHCCCCCEEEEEEHHHHHHHHHHCCCEEEEC READVERELAVTGVANALAGVLGGYTGCISISRSVLNVKAGGTGRISGLTVAAISALMLA CCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHH LSQPLLGYMPKFVLGGLLLYLGADTLHKWAVQSRRRLSKTDYASLLLIIAIILQWGFIAG HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH ILIGVVIGCAAFALSASRISAVKYGFDGSEYRSSLDRSRDHQALLMAQGREIQGLSLQSY HHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHCCCCCCCHHEECCCCCCCCCHHHH LFFGSANRLYQQVKLLLSRRAECRFLVFDFKLVTGIDSSAAYSFAQIKRLALERDVKLVL EEECCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEE VHLPRAVERTLRASEFISKDVLIAPELDHALEWCENTIIQSHHEHAQDEASLRDWFARIL ECCCHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GSDDEADELMSRCIRLDVGAGTTVVRAGEPAASMHFILDGRVGIMVPAEHGGTTRVRSLG CCCCCHHHHHHHHHEEECCCCCEEEECCCCCCCEEEEEECCEEEEEECCCCCHHHHHHCC RYTTIGEMGLIAQTPRSATIQAETDSVLYELTIAQFDAISREHPALAQKLLTYFMTIMAE CCCCCCCCCCEEECCCCCEEEECCCCEEEEEHHHHHHHHCCCCHHHHHHHHHHHHHHHHH RLSFANRTIAVLRR HHHHCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]