Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302754

Identifier: 146302754

GI number: 146302754

Start: 6065770

End: 6066705

Strand: Direct

Name: 146302754

Synonym: Fjoh_5027

Alternate gene names: NA

Gene position: 6065770-6066705 (Clockwise)

Preceding gene: 146302753

Following gene: 146302758

Centisome position: 99.49

GC content: 36.75

Gene sequence:

>936_bases
ATGAACAAAACAGTTTTTTATCTATCGCAGCTTTTTCTTCTTTTATTGGTTTCTGCTGCAGCACAATCACAATCCGGAAT
TTCAGGCGAGTTTAAAGTCGATTATGTTCCTTTTTCTAAATATGTCCGGCCAATGGACAGCACCAGAACAAATGCCGAAA
GCAATTTTAAAAGAGCCCAGATTGTTTTTGAAGTGCCAATTTCGTTAGAAACAGACAAATACAATAATCCCAGACTCTGG
TCTGTTTTTGTAAATGGAAGTTATGCGAGAATGGAAAACAGAAACTACAATATTCAAGATCTCCCGACAGAATTTCAGAC
AGGATTTCCAACTGAATTATTGAACACACAAGTTGGTATTAAACATTTACGATCTATTTCTCCATCCTGGTCTTTATTAA
TCCTGGCTTCTGTTGGAGTTTATACAGATATGGTCGAAATTAACAAAGATGATGTCCTGATACAAGGAGGAGTGCTTTTT
ATCAAACAATTTAATCCTAATCTGGCTTTAGGTATAGGCCCGGTTTTAACCAATAGTTTTGGTGTGCCAATGGTATTGCC
CGGAATTTATTTTAATTGGGAATTCAGAGGCGCCTTGCATTTTAAAGTTGCTTTTCCTGAAGGTGTGGAGTTTGGCTATA
AAATGTCTGACAATCTTGATTTAAAGCTTGTGGGAGAATTAAGCGGTATGACGGCCGAAACCAAAATTGGAAATAAATCT
TCGTTATTGGGATATCAGCAGATACTTGCAGGTTTACGACCTCAGCTTAAGTTTGGCGAGCATTGGACTCTTGAACCTAC
TGCTGGAACTACTCTTCTTCGCAGTTTCTCTACTACTAATAGAAAGATTAAAGATATTTTTAAAGAAAAAGATATAGCCG
ATCCAAGATTTACTACTACTTTTTACGGAGCAATAGCTCTAAAATGGAAATTCTAG

Upstream 100 bases:

>100_bases
TTGTATTTTATGCCATTGGTCAAAACAAAATTACCATTAGTCAAATGATTTTTCAGGATTGATTTAGATCGCGGTAATTC
GCAGAAAAATTAATCAAATC

Downstream 100 bases:

>100_bases
AGCTACCTGCTTAATAAGTTTTTATAGACTACCTCTTTCAATAATGCCTCGCGGCGGGTTCTTGAAATTGGTAGTTCTTG
TCCTTTTATAAATAATCGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQIVFEVPISLETDKYNNPRLW
SVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGIKHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLF
IKQFNPNLALGIGPVLTNSFGVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS
SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTTFYGAIALKWKF

Sequences:

>Translated_311_residues
MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQIVFEVPISLETDKYNNPRLW
SVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGIKHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLF
IKQFNPNLALGIGPVLTNSFGVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS
SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTTFYGAIALKWKF
>Mature_311_residues
MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQIVFEVPISLETDKYNNPRLW
SVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGIKHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLF
IKQFNPNLALGIGPVLTNSFGVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS
SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTTFYGAIALKWKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35047; Mature: 35047

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCEEEE
IVFEVPISLETDKYNNPRLWSVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGI
EEEEECEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHH
KHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLFIKQFNPNLALGIGPVLTNSF
HHHHHCCCCCEEEEEEHHCHHEEEEEECCCCEEEECCEEEEEECCCCEEEEECHHHHCCC
GVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS
CCCEEECCEEEEEEECCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCEEECCCCCCH
SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTT
HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEE
FYGAIALKWKF
EEEEEEEEEEC
>Mature Secondary Structure
MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQ
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCEEEE
IVFEVPISLETDKYNNPRLWSVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGI
EEEEECEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHH
KHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLFIKQFNPNLALGIGPVLTNSF
HHHHHCCCCCEEEEEEHHCHHEEEEEECCCCEEEECCEEEEEECCCCEEEEECHHHHCCC
GVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS
CCCEEECCEEEEEEECCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCEEECCCCCCH
SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTT
HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEE
FYGAIALKWKF
EEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA