Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302758

Identifier: 146302758

GI number: 146302758

Start: 6070019

End: 6070855

Strand: Direct

Name: 146302758

Synonym: Fjoh_5031

Alternate gene names: NA

Gene position: 6070019-6070855 (Clockwise)

Preceding gene: 146302754

Following gene: 146302759

Centisome position: 99.56

GC content: 31.3

Gene sequence:

>837_bases
ATGGAAAAATTTACATTAGAGATATTATTTCAAATCATCGGAATCGGTTCTGCATCAGGATTATTTTACAACAATGATGC
CCTTTACATTATTGGCGACAACAGCGGATTTTTATACGAATACAACATGCAGAATCAGCAGTTGAATCAGCATGCTTTAA
TTGATAATCCAACGCAGAATATCCCCAAAAATTTAAAACCAGATTTTGAATCTTTAACACATCACAACGATACGCTTTAT
GTTTTTGGTTCCGGCTCTACCGAAAACCGAAACAAAATGATTGAGTTTGATATTAAAAATAAAAACGTTTTACAAAAAAA
CAATTTAGTCGATTTATATGCCGTAATGCAGAATTTCGGTTCAATAAAACCAGAAGATTTTAATCTGGAAGGAGCTGTCT
TTGATGGTGAAAACTGGTATTTATTTAACCGCGGAAATGGCGTATCAAATAAAAACACCATTTTTACCATTCACGCCAAA
AGTCTCGGTGATGAATTTGCTTTGGTTGCGACCAATTATAAACTTCCAAAAATAAAAGGCATTCGTTCCAGTTTTACTGA
TGCTGTTTTAGTCGAAGACAAAATCTATTTTCTTTCAACCGTCGAAAACACAAAATCAACTTATGATGATGGTGAAATTT
TAGGAAGCTTTATTGGCAGAATTGATCTTAAAACGATGAAAATTGATTTTACTCAAAAAATTACTTCAACTAATAAATTT
GAAGGTTTGACTTTCTATAAAAAAGAAAACAATAAAATCGAGTTTTTACTTTGCGAGGATAATGATACGGAATTGTTAGA
AACCAAAATTTTCAAATTGACTCTTCCAATTAAATAA

Upstream 100 bases:

>100_bases
ATTTCATATTTTTCACATTTATATCATAAATATACTACTTTTACGAATTCTGTCAGCTATCGGCATCACTATTAGCTGCC
TGTTTTTCAAAATAACATTC

Downstream 100 bases:

>100_bases
AATGTAACATTTTTCTTAAAATAACGTCTTTTATACCAAAACCAAGAACCAATAATTATAAATTTATTTAAAAATAATGA
TCAAAAAAACCGCTTTCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MEKFTLEILFQIIGIGSASGLFYNNDALYIIGDNSGFLYEYNMQNQQLNQHALIDNPTQNIPKNLKPDFESLTHHNDTLY
VFGSGSTENRNKMIEFDIKNKNVLQKNNLVDLYAVMQNFGSIKPEDFNLEGAVFDGENWYLFNRGNGVSNKNTIFTIHAK
SLGDEFALVATNYKLPKIKGIRSSFTDAVLVEDKIYFLSTVENTKSTYDDGEILGSFIGRIDLKTMKIDFTQKITSTNKF
EGLTFYKKENNKIEFLLCEDNDTELLETKIFKLTLPIK

Sequences:

>Translated_278_residues
MEKFTLEILFQIIGIGSASGLFYNNDALYIIGDNSGFLYEYNMQNQQLNQHALIDNPTQNIPKNLKPDFESLTHHNDTLY
VFGSGSTENRNKMIEFDIKNKNVLQKNNLVDLYAVMQNFGSIKPEDFNLEGAVFDGENWYLFNRGNGVSNKNTIFTIHAK
SLGDEFALVATNYKLPKIKGIRSSFTDAVLVEDKIYFLSTVENTKSTYDDGEILGSFIGRIDLKTMKIDFTQKITSTNKF
EGLTFYKKENNKIEFLLCEDNDTELLETKIFKLTLPIK
>Mature_278_residues
MEKFTLEILFQIIGIGSASGLFYNNDALYIIGDNSGFLYEYNMQNQQLNQHALIDNPTQNIPKNLKPDFESLTHHNDTLY
VFGSGSTENRNKMIEFDIKNKNVLQKNNLVDLYAVMQNFGSIKPEDFNLEGAVFDGENWYLFNRGNGVSNKNTIFTIHAK
SLGDEFALVATNYKLPKIKGIRSSFTDAVLVEDKIYFLSTVENTKSTYDDGEILGSFIGRIDLKTMKIDFTQKITSTNKF
EGLTFYKKENNKIEFLLCEDNDTELLETKIFKLTLPIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31780; Mature: 31780

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKFTLEILFQIIGIGSASGLFYNNDALYIIGDNSGFLYEYNMQNQQLNQHALIDNPTQN
CCCHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCCCCEECCCCHHH
IPKNLKPDFESLTHHNDTLYVFGSGSTENRNKMIEFDIKNKNVLQKNNLVDLYAVMQNFG
CCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHC
SIKPEDFNLEGAVFDGENWYLFNRGNGVSNKNTIFTIHAKSLGDEFALVATNYKLPKIKG
CCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCC
IRSSFTDAVLVEDKIYFLSTVENTKSTYDDGEILGSFIGRIDLKTMKIDFTQKITSTNKF
CHHCCCCEEEEECEEEEEEEECCCCCCCCCHHHHHHHHCEEEEEEEEEEEHHHHCCCCCC
EGLTFYKKENNKIEFLLCEDNDTELLETKIFKLTLPIK
CCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECCC
>Mature Secondary Structure
MEKFTLEILFQIIGIGSASGLFYNNDALYIIGDNSGFLYEYNMQNQQLNQHALIDNPTQN
CCCHHHHHHHHHHCCCCCCCEEECCCEEEEEECCCCEEEEECCCCCCCCCCEECCCCHHH
IPKNLKPDFESLTHHNDTLYVFGSGSTENRNKMIEFDIKNKNVLQKNNLVDLYAVMQNFG
CCCCCCCCHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCEEECCCCCHHHHHHHHHC
SIKPEDFNLEGAVFDGENWYLFNRGNGVSNKNTIFTIHAKSLGDEFALVATNYKLPKIKG
CCCCCCCCCEEEEEECCCEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCC
IRSSFTDAVLVEDKIYFLSTVENTKSTYDDGEILGSFIGRIDLKTMKIDFTQKITSTNKF
CHHCCCCEEEEECEEEEEEEECCCCCCCCCHHHHHHHHCEEEEEEEEEEEHHHHCCCCCC
EGLTFYKKENNKIEFLLCEDNDTELLETKIFKLTLPIK
CCEEEEEECCCEEEEEEECCCCCCEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA