| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302753
Identifier: 146302753
GI number: 146302753
Start: 6065086
End: 6065601
Strand: Direct
Name: 146302753
Synonym: Fjoh_5026
Alternate gene names: NA
Gene position: 6065086-6065601 (Clockwise)
Preceding gene: 146302748
Following gene: 146302754
Centisome position: 99.48
GC content: 35.27
Gene sequence:
>516_bases ATGAAAAAATTACAGATTATATGCCTAGCTGCCTTTGCTTTTTTATACTCCAACACAACTTTCGCTCAAGACGCCGCAAC AAATTACAATCAGGGATTTAGATTAGGTTTTGGGTTAAATGGCGGTATTCCAACCGATAATGATTATGACTGGTCACTTG GAGGAGACGTTCGTTTACAATATGATTTATCTAAAAAAACATCATTAACGCTAACAACAGGTTTTACAAATTTATTTTTA GGAAAAGATGATTTAGGAAATGACATAAAAGATTTAGGATTTATTCCTGCAAAAGCTGGTTTTAAAGCTTTTATCTGGGA AGATCAATTTTATGTTTTAGGTGAAGTAGGTGCCGGTTTTGCTGTAACAAACGGTTATAACGACACTACTTTTTTATGGG CGCCTGGAATTGGGTACGCCAACAAATACATTGATATAAGTGTCCGCTACGAGGACTACAACAAATTCAAAACCAACCAA GTGGCTTTACGTTTAGCCTATGGTTTTGATCTATAA
Upstream 100 bases:
>100_bases GCATACCATAATATTATATAACGATTTTTAAAAATTATATAACAAGCTCAAAAGACCTCTATTTTACTTTTACATTATTA ATAATTCAAAAATATTTGCC
Downstream 100 bases:
>100_bases AAAGAAAGGTTTATTTTATTTTTTTGTTTTTGGTAACAGACCCGGAAGTTTTCATAGTCTTCCGGGTTTTGTATTTTATG CCATTGGTCAAAACAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKKLQIICLAAFAFLYSNTTFAQDAATNYNQGFRLGFGLNGGIPTDNDYDWSLGGDVRLQYDLSKKTSLTLTTGFTNLFL GKDDLGNDIKDLGFIPAKAGFKAFIWEDQFYVLGEVGAGFAVTNGYNDTTFLWAPGIGYANKYIDISVRYEDYNKFKTNQ VALRLAYGFDL
Sequences:
>Translated_171_residues MKKLQIICLAAFAFLYSNTTFAQDAATNYNQGFRLGFGLNGGIPTDNDYDWSLGGDVRLQYDLSKKTSLTLTTGFTNLFL GKDDLGNDIKDLGFIPAKAGFKAFIWEDQFYVLGEVGAGFAVTNGYNDTTFLWAPGIGYANKYIDISVRYEDYNKFKTNQ VALRLAYGFDL >Mature_171_residues MKKLQIICLAAFAFLYSNTTFAQDAATNYNQGFRLGFGLNGGIPTDNDYDWSLGGDVRLQYDLSKKTSLTLTTGFTNLFL GKDDLGNDIKDLGFIPAKAGFKAFIWEDQFYVLGEVGAGFAVTNGYNDTTFLWAPGIGYANKYIDISVRYEDYNKFKTNQ VALRLAYGFDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19055; Mature: 19055
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLQIICLAAFAFLYSNTTFAQDAATNYNQGFRLGFGLNGGIPTDNDYDWSLGGDVRLQ CCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCEEEE YDLSKKTSLTLTTGFTNLFLGKDDLGNDIKDLGFIPAKAGFKAFIWEDQFYVLGEVGAGF EECCCCEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEECCCEEEEEECCCCE AVTNGYNDTTFLWAPGIGYANKYIDISVRYEDYNKFKTNQVALRLAYGFDL EEECCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCC >Mature Secondary Structure MKKLQIICLAAFAFLYSNTTFAQDAATNYNQGFRLGFGLNGGIPTDNDYDWSLGGDVRLQ CCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCEECCCCEEEE YDLSKKTSLTLTTGFTNLFLGKDDLGNDIKDLGFIPAKAGFKAFIWEDQFYVLGEVGAGF EECCCCEEEEEEECCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEECCCEEEEEECCCCE AVTNGYNDTTFLWAPGIGYANKYIDISVRYEDYNKFKTNQVALRLAYGFDL EEECCCCCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA