| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302754
Identifier: 146302754
GI number: 146302754
Start: 6065770
End: 6066705
Strand: Direct
Name: 146302754
Synonym: Fjoh_5027
Alternate gene names: NA
Gene position: 6065770-6066705 (Clockwise)
Preceding gene: 146302753
Following gene: 146302758
Centisome position: 99.49
GC content: 36.75
Gene sequence:
>936_bases ATGAACAAAACAGTTTTTTATCTATCGCAGCTTTTTCTTCTTTTATTGGTTTCTGCTGCAGCACAATCACAATCCGGAAT TTCAGGCGAGTTTAAAGTCGATTATGTTCCTTTTTCTAAATATGTCCGGCCAATGGACAGCACCAGAACAAATGCCGAAA GCAATTTTAAAAGAGCCCAGATTGTTTTTGAAGTGCCAATTTCGTTAGAAACAGACAAATACAATAATCCCAGACTCTGG TCTGTTTTTGTAAATGGAAGTTATGCGAGAATGGAAAACAGAAACTACAATATTCAAGATCTCCCGACAGAATTTCAGAC AGGATTTCCAACTGAATTATTGAACACACAAGTTGGTATTAAACATTTACGATCTATTTCTCCATCCTGGTCTTTATTAA TCCTGGCTTCTGTTGGAGTTTATACAGATATGGTCGAAATTAACAAAGATGATGTCCTGATACAAGGAGGAGTGCTTTTT ATCAAACAATTTAATCCTAATCTGGCTTTAGGTATAGGCCCGGTTTTAACCAATAGTTTTGGTGTGCCAATGGTATTGCC CGGAATTTATTTTAATTGGGAATTCAGAGGCGCCTTGCATTTTAAAGTTGCTTTTCCTGAAGGTGTGGAGTTTGGCTATA AAATGTCTGACAATCTTGATTTAAAGCTTGTGGGAGAATTAAGCGGTATGACGGCCGAAACCAAAATTGGAAATAAATCT TCGTTATTGGGATATCAGCAGATACTTGCAGGTTTACGACCTCAGCTTAAGTTTGGCGAGCATTGGACTCTTGAACCTAC TGCTGGAACTACTCTTCTTCGCAGTTTCTCTACTACTAATAGAAAGATTAAAGATATTTTTAAAGAAAAAGATATAGCCG ATCCAAGATTTACTACTACTTTTTACGGAGCAATAGCTCTAAAATGGAAATTCTAG
Upstream 100 bases:
>100_bases TTGTATTTTATGCCATTGGTCAAAACAAAATTACCATTAGTCAAATGATTTTTCAGGATTGATTTAGATCGCGGTAATTC GCAGAAAAATTAATCAAATC
Downstream 100 bases:
>100_bases AGCTACCTGCTTAATAAGTTTTTATAGACTACCTCTTTCAATAATGCCTCGCGGCGGGTTCTTGAAATTGGTAGTTCTTG TCCTTTTATAAATAATCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQIVFEVPISLETDKYNNPRLW SVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGIKHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLF IKQFNPNLALGIGPVLTNSFGVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTTFYGAIALKWKF
Sequences:
>Translated_311_residues MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQIVFEVPISLETDKYNNPRLW SVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGIKHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLF IKQFNPNLALGIGPVLTNSFGVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTTFYGAIALKWKF >Mature_311_residues MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQIVFEVPISLETDKYNNPRLW SVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGIKHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLF IKQFNPNLALGIGPVLTNSFGVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTTFYGAIALKWKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35047; Mature: 35047
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCEEEE IVFEVPISLETDKYNNPRLWSVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGI EEEEECEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHH KHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLFIKQFNPNLALGIGPVLTNSF HHHHHCCCCCEEEEEEHHCHHEEEEEECCCCEEEECCEEEEEECCCCEEEEECHHHHCCC GVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS CCCEEECCEEEEEEECCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCEEECCCCCCH SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTT HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEE FYGAIALKWKF EEEEEEEEEEC >Mature Secondary Structure MNKTVFYLSQLFLLLLVSAAAQSQSGISGEFKVDYVPFSKYVRPMDSTRTNAESNFKRAQ CCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHCCCCCCCCCCCCCCEEEE IVFEVPISLETDKYNNPRLWSVFVNGSYARMENRNYNIQDLPTEFQTGFPTELLNTQVGI EEEEECEEEECCCCCCCEEEEEEECCCEEEECCCCCCCCCCCHHHCCCCCHHHHHHHHHH KHLRSISPSWSLLILASVGVYTDMVEINKDDVLIQGGVLFIKQFNPNLALGIGPVLTNSF HHHHHCCCCCEEEEEEHHCHHEEEEEECCCCEEEECCEEEEEECCCCEEEEECHHHHCCC GVPMVLPGIYFNWEFRGALHFKVAFPEGVEFGYKMSDNLDLKLVGELSGMTAETKIGNKS CCCEEECCEEEEEEECCEEEEEEECCCCCCCCEEECCCCCEEEEECCCCCEEECCCCCCH SLLGYQQILAGLRPQLKFGEHWTLEPTAGTTLLRSFSTTNRKIKDIFKEKDIADPRFTTT HHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEE FYGAIALKWKF EEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA