| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302735
Identifier: 146302735
GI number: 146302735
Start: 6046414
End: 6047373
Strand: Direct
Name: 146302735
Synonym: Fjoh_5008
Alternate gene names: NA
Gene position: 6046414-6047373 (Clockwise)
Preceding gene: 146302734
Following gene: 146302740
Centisome position: 99.17
GC content: 34.9
Gene sequence:
>960_bases ATGAAAAAATTAATCGTAACATGTTTTCTTTTGGCTGGCTTTTCAGTCTTTAGTTTTACTGAAAAAGACAGTATTTCTGC TTTCACTTTTCATCGTTTAGAAATGATGGAAGATTTTGACTGTGATGCCTGCGGATGTTCTGCAAGCGGCGGAAGTATGG GTTTCAGTTCTATGCTAAACAACAACTTTGTAGGTTTAAGATACTTCAAACAAAGCTACACAAGCCGTGACGGAATTTTT GCTAATTCTCCGTGGATAGATGAAAACTTTAATACCATTCAGGCCTGGGCAAGAATTCCAATTACTGAGAAAATTCAGAT TTCGGCTTTGGTTCCGTATCATTTTCATGAAAGAGAATTAACTGCCGGAACGCAAAGTATTGAAGGATTAGGAGACATTA CAATTATGGGACTTTATACGGTTTATGAAACTAAAAAAGACAGCACCGTTTTTACTCATAAATTAAATGTTGGCGGGGGA GTTAAAATACCAACCGGAAAATTCAAAGAAATTAACAACCTGGGAACTATAAACCAGAGTTTTCAATTAGGAACCGGAAG CTGGGATTTTCCTTTAGTAACAGAATATGTTATTAAACATAAAAATCTTGGTTTAAATACAACCGTAAATTATATCTTAA AAACAGAAAACACTAAAAATTACCAATACGGCGATCAGTTTAATTATGCCGGTACTTTCTTTTATTTGTTTAATGCAAAT GATTTCCAGATTGTGCCGCAGGCAGGTCTTGCAGGAGAAGTCTATCAGACTAATAAACAGTACAATTTAGATTTACCCAA TACTGCCGGAGATATTTTGTTTGGAAAATTTGGCATCGAAGCAGGTAAAGACCGTTTTTCTATTGGTATAAATGCAATGC TTCCTATTCAGCAGAATCTTTCAAATGGCAATATGGAAGCCAATTACAGATGGAGCATTAATTTGAATTATACTTTGTAG
Upstream 100 bases:
>100_bases CGTTTCGCTGAATATTAGAATAAAAATACAGTCGCAGATTTCACAGATTAAAATACAAAGCTTAATCATATCAAAAATCT GAGGCAAAAAAATAATTAAA
Downstream 100 bases:
>100_bases TTTTTAGGTGCTAAGGTACTGAAGAACTACGGTTCTAAGTTTTTTTAGCCGTAAATTCGAATTCATAAATTCGAATTTAC GGCTAATTTTTATCTTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MKKLIVTCFLLAGFSVFSFTEKDSISAFTFHRLEMMEDFDCDACGCSASGGSMGFSSMLNNNFVGLRYFKQSYTSRDGIF ANSPWIDENFNTIQAWARIPITEKIQISALVPYHFHERELTAGTQSIEGLGDITIMGLYTVYETKKDSTVFTHKLNVGGG VKIPTGKFKEINNLGTINQSFQLGTGSWDFPLVTEYVIKHKNLGLNTTVNYILKTENTKNYQYGDQFNYAGTFFYLFNAN DFQIVPQAGLAGEVYQTNKQYNLDLPNTAGDILFGKFGIEAGKDRFSIGINAMLPIQQNLSNGNMEANYRWSINLNYTL
Sequences:
>Translated_319_residues MKKLIVTCFLLAGFSVFSFTEKDSISAFTFHRLEMMEDFDCDACGCSASGGSMGFSSMLNNNFVGLRYFKQSYTSRDGIF ANSPWIDENFNTIQAWARIPITEKIQISALVPYHFHERELTAGTQSIEGLGDITIMGLYTVYETKKDSTVFTHKLNVGGG VKIPTGKFKEINNLGTINQSFQLGTGSWDFPLVTEYVIKHKNLGLNTTVNYILKTENTKNYQYGDQFNYAGTFFYLFNAN DFQIVPQAGLAGEVYQTNKQYNLDLPNTAGDILFGKFGIEAGKDRFSIGINAMLPIQQNLSNGNMEANYRWSINLNYTL >Mature_319_residues MKKLIVTCFLLAGFSVFSFTEKDSISAFTFHRLEMMEDFDCDACGCSASGGSMGFSSMLNNNFVGLRYFKQSYTSRDGIF ANSPWIDENFNTIQAWARIPITEKIQISALVPYHFHERELTAGTQSIEGLGDITIMGLYTVYETKKDSTVFTHKLNVGGG VKIPTGKFKEINNLGTINQSFQLGTGSWDFPLVTEYVIKHKNLGLNTTVNYILKTENTKNYQYGDQFNYAGTFFYLFNAN DFQIVPQAGLAGEVYQTNKQYNLDLPNTAGDILFGKFGIEAGKDRFSIGINAMLPIQQNLSNGNMEANYRWSINLNYTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35831; Mature: 35831
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLIVTCFLLAGFSVFSFTEKDSISAFTFHRLEMMEDFDCDACGCSASGGSMGFSSMLN CCHHHHHHHHHHCCCEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHC NNFVGLRYFKQSYTSRDGIFANSPWIDENFNTIQAWARIPITEKIQISALVPYHFHEREL CCCEEEEEHHHHCCCCCCEEECCCCCCCCCCCEEHEEECCCCCEEEEEEECCEEECCCCC TAGTQSIEGLGDITIMGLYTVYETKKDSTVFTHKLNVGGGVKIPTGKFKEINNLGTINQS CCCCHHCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEECCCCCCHHCCCCCCCCCC FQLGTGSWDFPLVTEYVIKHKNLGLNTTVNYILKTENTKNYQYGDQFNYAGTFFYLFNAN EEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECC DFQIVPQAGLAGEVYQTNKQYNLDLPNTAGDILFGKFGIEAGKDRFSIGINAMLPIQQNL CEEEEECCCCCCCEEECCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEHHCC SNGNMEANYRWSINLNYTL CCCCEEEEEEEEEEEEEEC >Mature Secondary Structure MKKLIVTCFLLAGFSVFSFTEKDSISAFTFHRLEMMEDFDCDACGCSASGGSMGFSSMLN CCHHHHHHHHHHCCCEEEECCCCCCEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHC NNFVGLRYFKQSYTSRDGIFANSPWIDENFNTIQAWARIPITEKIQISALVPYHFHEREL CCCEEEEEHHHHCCCCCCEEECCCCCCCCCCCEEHEEECCCCCEEEEEEECCEEECCCCC TAGTQSIEGLGDITIMGLYTVYETKKDSTVFTHKLNVGGGVKIPTGKFKEINNLGTINQS CCCCHHCCCCCCEEEEEEEEEEECCCCCEEEEEEECCCCCEECCCCCCHHCCCCCCCCCC FQLGTGSWDFPLVTEYVIKHKNLGLNTTVNYILKTENTKNYQYGDQFNYAGTFFYLFNAN EEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEEEECC DFQIVPQAGLAGEVYQTNKQYNLDLPNTAGDILFGKFGIEAGKDRFSIGINAMLPIQQNL CEEEEECCCCCCCEEECCCEEECCCCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEHHCC SNGNMEANYRWSINLNYTL CCCCEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA