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The map label for this gene is rprY [H]

Identifier: 146302697

GI number: 146302697

Start: 6007146

End: 6007832

Strand: Direct

Name: rprY [H]

Synonym: Fjoh_4970

Alternate gene names: 146302697

Gene position: 6007146-6007832 (Clockwise)

Preceding gene: 146302696

Following gene: 146302698

Centisome position: 98.53

GC content: 31.73

Gene sequence:

>687_bases
ATGAAAAACTTCAAAATACTTTACACAGAAGACGATGAAACTCTGGCATTTTTAACCAAAGATAATCTGGAACAGAATAA
TTATGAAGTTATTCACTGCACCAATGGAAAATCTGGTTTGGAAACATTTAAAAATGAAGATTTTGATATTTGCATTTTTG
ACATTATGATGCCAAAAATGGACGGTTTTGAACTGGCCGAAGAAGTAAGAAAAATTGATAATGATGTGCCTATTATTTTT
CTTTCGGCTAAAACTTTAAAAGAGGACCGCATAAAAGGACTTCGTCTTGGCGCCGATGATTATTTAGTAAAGCCTTTCAG
CATTGAAGAATTAATTTTAAAGATTGAAGTTTTCCTGAAACGTTCACAGAAAAACAATAAAGTAGAAAAATCTGTATATG
AAATTGGGAAATATCAATTTGATACCAAAAATTTTATTCTTTTTAATGAAGAAGAAAAAGTGGGCCTTACACAACGCGAA
GCCGAATTGCTGAAACTTTTTATAGACAATAAAAATCTGGTTTTAAAAAGAGAACAAATCTTAACTGCACTTTGGGGTAC
AGATGATTATTTTATGGGAAGAAGCCTTGATGTTTTTATTTCGCGTCTGCGCAAAATTTTAGCCAATGAAAAAGGTATTT
CGATTGAAAACCTCCACGGAATTGGGTTTCGCTTTTCTATTGAATAA

Upstream 100 bases:

>100_bases
ACTATGTTAAAGAAATCTGCAGCCTGCAGAACTGGAAAATAAAAGCTGAAAATAATTCTGAAAACGGAGTTACTATAACT
TTGTTAATTCCTTATAAAAA

Downstream 100 bases:

>100_bases
ATAATAACAATTCTGTTAAAAATAAAGAAAAATCTGTAAAACAATTTTCAAAAAACTTTGTATTTTTAAGTTCTAATTTT
CCCAGATATGAAAATACATC

Product: two component transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKNFKILYTEDDETLAFLTKDNLEQNNYEVIHCTNGKSGLETFKNEDFDICIFDIMMPKMDGFELAEEVRKIDNDVPIIF
LSAKTLKEDRIKGLRLGADDYLVKPFSIEELILKIEVFLKRSQKNNKVEKSVYEIGKYQFDTKNFILFNEEEKVGLTQRE
AELLKLFIDNKNLVLKREQILTALWGTDDYFMGRSLDVFISRLRKILANEKGISIENLHGIGFRFSIE

Sequences:

>Translated_228_residues
MKNFKILYTEDDETLAFLTKDNLEQNNYEVIHCTNGKSGLETFKNEDFDICIFDIMMPKMDGFELAEEVRKIDNDVPIIF
LSAKTLKEDRIKGLRLGADDYLVKPFSIEELILKIEVFLKRSQKNNKVEKSVYEIGKYQFDTKNFILFNEEEKVGLTQRE
AELLKLFIDNKNLVLKREQILTALWGTDDYFMGRSLDVFISRLRKILANEKGISIENLHGIGFRFSIE
>Mature_228_residues
MKNFKILYTEDDETLAFLTKDNLEQNNYEVIHCTNGKSGLETFKNEDFDICIFDIMMPKMDGFELAEEVRKIDNDVPIIF
LSAKTLKEDRIKGLRLGADDYLVKPFSIEELILKIEVFLKRSQKNNKVEKSVYEIGKYQFDTKNFILFNEEEKVGLTQRE
AELLKLFIDNKNLVLKREQILTALWGTDDYFMGRSLDVFISRLRKILANEKGISIENLHGIGFRFSIE

Specific function: Member of the two-component regulatory system rprX/rprY [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=231, Percent_Identity=32.034632034632, Blast_Score=127, Evalue=8e-31,
Organism=Escherichia coli, GI1786599, Length=227, Percent_Identity=30.8370044052863, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=30.6306306306306, Blast_Score=112, Evalue=1e-26,
Organism=Escherichia coli, GI1786784, Length=227, Percent_Identity=29.9559471365639, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87082012, Length=225, Percent_Identity=30.2222222222222, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1788394, Length=231, Percent_Identity=29.4372294372294, Blast_Score=107, Evalue=8e-25,
Organism=Escherichia coli, GI1786911, Length=224, Percent_Identity=30.3571428571429, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1790860, Length=225, Percent_Identity=28, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=27.8969957081545, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787375, Length=226, Percent_Identity=27.4336283185841, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=28.0701754385965, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI2367329, Length=212, Percent_Identity=31.1320754716981, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1790552, Length=220, Percent_Identity=26.3636363636364, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788550, Length=117, Percent_Identity=31.6239316239316, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1790437, Length=122, Percent_Identity=27.0491803278689, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=25, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1788713, Length=110, Percent_Identity=33.6363636363636, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI48994928, Length=121, Percent_Identity=31.404958677686, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI145693157, Length=120, Percent_Identity=26.6666666666667, Blast_Score=61, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322000, Length=110, Percent_Identity=32.7272727272727, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26672; Mature: 26672

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFKILYTEDDETLAFLTKDNLEQNNYEVIHCTNGKSGLETFKNEDFDICIFDIMMPKM
CCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCC
DGFELAEEVRKIDNDVPIIFLSAKTLKEDRIKGLRLGADDYLVKPFSIEELILKIEVFLK
CCHHHHHHHHHHCCCCCEEEEECCHHHHHHCCEEEECCCCEEECCCCHHHHHHHHHHHHH
RSQKNNKVEKSVYEIGKYQFDTKNFILFNEEEKVGLTQREAELLKLFIDNKNLVLKREQI
HCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCCCHHHHHHHHHEEECCCCEEEEHHHH
LTALWGTDDYFMGRSLDVFISRLRKILANEKGISIENLHGIGFRFSIE
HHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEC
>Mature Secondary Structure
MKNFKILYTEDDETLAFLTKDNLEQNNYEVIHCTNGKSGLETFKNEDFDICIFDIMMPKM
CCCEEEEEECCCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCC
DGFELAEEVRKIDNDVPIIFLSAKTLKEDRIKGLRLGADDYLVKPFSIEELILKIEVFLK
CCHHHHHHHHHHCCCCCEEEEECCHHHHHHCCEEEECCCCEEECCCCHHHHHHHHHHHHH
RSQKNNKVEKSVYEIGKYQFDTKNFILFNEEEKVGLTQREAELLKLFIDNKNLVLKREQI
HCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCCCHHHHHHHHHEEECCCCEEEEHHHH
LTALWGTDDYFMGRSLDVFISRLRKILANEKGISIENLHGIGFRFSIE
HHHHCCCCCHHCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8469117 [H]