| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302695
Identifier: 146302695
GI number: 146302695
Start: 6005301
End: 6005717
Strand: Reverse
Name: 146302695
Synonym: Fjoh_4968
Alternate gene names: NA
Gene position: 6005717-6005301 (Counterclockwise)
Preceding gene: 146302699
Following gene: 146302694
Centisome position: 98.5
GC content: 36.21
Gene sequence:
>417_bases ATGAAAATCATCAAAATCTCAATGCTTGCTTTGGCTTTAGGGCTAATGTCTTTTTCGGCAATTGCTCCGGTGCAGTCAAT TGTAAATGAAAAAGAAATTGAAGGAACAACAGCTTCAACAATTGTTTGGAAAGCCGAAACAATTGATGTTGGACAAATTC CGCAGGGAACTCCAAAAGCGATTGTTTATGAATTTAAAAATACAGGAAAAACTTCTGTAGTAATTACACAAGTTCAGGGT TCATGCGGTTGTACAGCAACAGATTACATCAAAGAACCAATTTTACCTGGAAAATCTGCAAAGGTTACAGCAACTTACAA TGCAGCAAACAAAGGTGCTTTTACAAAAACAGTTACAGTAACAACTAGTGCCGAAACTGCTCCAAAAATCCTTACTCTAA AAGGTACAGTTATCTAA
Upstream 100 bases:
>100_bases TCGTTAACAAACATTTGAAAGCGGTTAACAGCGATTCGATTTTGTCTGAATTACCTTTGAAATATGAAATCGAACTTTAA ACCATTTAATATATTTAACT
Downstream 100 bases:
>100_bases AAAATTTTAAATAGGTTGGTTATATCGTGGCAGCTCCAAATATGTAATGTATTTGGAGCTTTTTTTGTCTTAATTTAATG TTTTTTTATTTTTTGAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MKIIKISMLALALGLMSFSAIAPVQSIVNEKEIEGTTASTIVWKAETIDVGQIPQGTPKAIVYEFKNTGKTSVVITQVQG SCGCTATDYIKEPILPGKSAKVTATYNAANKGAFTKTVTVTTSAETAPKILTLKGTVI
Sequences:
>Translated_138_residues MKIIKISMLALALGLMSFSAIAPVQSIVNEKEIEGTTASTIVWKAETIDVGQIPQGTPKAIVYEFKNTGKTSVVITQVQG SCGCTATDYIKEPILPGKSAKVTATYNAANKGAFTKTVTVTTSAETAPKILTLKGTVI >Mature_138_residues MKIIKISMLALALGLMSFSAIAPVQSIVNEKEIEGTTASTIVWKAETIDVGQIPQGTPKAIVYEFKNTGKTSVVITQVQG SCGCTATDYIKEPILPGKSAKVTATYNAANKGAFTKTVTVTTSAETAPKILTLKGTVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14465; Mature: 14465
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIKISMLALALGLMSFSAIAPVQSIVNEKEIEGTTASTIVWKAETIDVGQIPQGTPKA CEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEEECEEECCCCCCCCCCE IVYEFKNTGKTSVVITQVQGSCGCTATDYIKEPILPGKSAKVTATYNAANKGAFTKTVTV EEEEECCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEE TTSAETAPKILTLKGTVI EECCCCCCEEEEEEEEEC >Mature Secondary Structure MKIIKISMLALALGLMSFSAIAPVQSIVNEKEIEGTTASTIVWKAETIDVGQIPQGTPKA CEEEEHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEEECEEECCCCCCCCCCE IVYEFKNTGKTSVVITQVQGSCGCTATDYIKEPILPGKSAKVTATYNAANKGAFTKTVTV EEEEECCCCCEEEEEEEECCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEEEEE TTSAETAPKILTLKGTVI EECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA