| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302667
Identifier: 146302667
GI number: 146302667
Start: 5967038
End: 5968075
Strand: Direct
Name: 146302667
Synonym: Fjoh_4940
Alternate gene names: NA
Gene position: 5967038-5968075 (Clockwise)
Preceding gene: 146302664
Following gene: 146302668
Centisome position: 97.87
GC content: 42.58
Gene sequence:
>1038_bases ATGAAAACTTATACTACTCTCCGCCAAAACTCAAGTCATTTTTACTTAATTGGATTACTGAGTTTTCTTTTAGCATCATG TGGTTCTTACCAAAACACGTCTTATTATGACAGTGATGGTGTTTATGGTAATTCTACCAACAGATATGCTCAAACAAACA ATACCACAGCAGCAAACAATCAATATAGAGATTATTTTAGATCACTGCAGGAAGATGATCAGCCAACTGAAATTTTCACA GATGTAGACAATTATGGCAATTATTCTGAAAGCGACAGCACAAGAACCGCTTCTACAGCTTACCCTGCTTGGGGAAGCAG TAATTCAGATGTATCTGTAAACGTATACTCTACTCCAAACTGGTCATTCGGACTAGGATGGGGATATCCTTATTACGGAT GGGGTTACGGCGGATACTGGGGCGGAGGCTACTGGGGAGCCGGATGGGGCTATCCAGGATATGCCTGGGGATACCCTGGC TACTGGGGACCTGGATGGGGTTATCCAGGATACTGGGGAGGCGGCTATTACGGAAACTACTCATACAGCTACGGAAGAAG AGGATCTGCTGCTTACTACAACAACAGATATTATTCTTCAAACAGAGCATATGCTTCTAACAGAAACTACCTTTCAAACA GAAATTATTCTACCAACAGAAATAGTTTCTCTAATCGAAACAGCTATACAACAAACAGAAATTACACCAATAGATCAAAC AGTTATTCTGATTACAGAAGAAGTTCATCTGTAAATGGAAGAACTTACGATAGTTCGAGCCCAAACTTCACAAATAGAAG AAGCTATTCTACTCAAGGCCAAAACAGCACTTACGATTATTCTAACAGAAGATCAAGCAGCAGCACCATGCCTTCAAACA GAAGCTACAACAACAGCAGTAACAGCAATTCATCAAGAAGCTACTCTCCTAGCCCATCACGTTCAATGAACAGCGGAGGA GGAAGCATGAGATCATCTGGTGGCGGCGGTGGCGGCGGAGGAAGATCTTACGGTGGCGGAGGAGGCGGAAGAAGGTAA
Upstream 100 bases:
>100_bases TATATAGTTTGGCACAAATTTTGTTTTAAATAATTTTAACTAAATAGTTTGACAAAACTAACTATTTTTGTAATGTGCAA CAATAAAAAACACCACAGAT
Downstream 100 bases:
>100_bases CATTTTCGTCCTTTTTCCAATCTAATATCACACACTAAATACTTACCCAATGAAAAAAATATTATTCCTATTTATTACAG GACTGACTGTCAGCGTCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MKTYTTLRQNSSHFYLIGLLSFLLASCGSYQNTSYYDSDGVYGNSTNRYAQTNNTTAANNQYRDYFRSLQEDDQPTEIFT DVDNYGNYSESDSTRTASTAYPAWGSSNSDVSVNVYSTPNWSFGLGWGYPYYGWGYGGYWGGGYWGAGWGYPGYAWGYPG YWGPGWGYPGYWGGGYYGNYSYSYGRRGSAAYYNNRYYSSNRAYASNRNYLSNRNYSTNRNSFSNRNSYTTNRNYTNRSN SYSDYRRSSSVNGRTYDSSSPNFTNRRSYSTQGQNSTYDYSNRRSSSSTMPSNRSYNNSSNSNSSRSYSPSPSRSMNSGG GSMRSSGGGGGGGGRSYGGGGGGRR
Sequences:
>Translated_345_residues MKTYTTLRQNSSHFYLIGLLSFLLASCGSYQNTSYYDSDGVYGNSTNRYAQTNNTTAANNQYRDYFRSLQEDDQPTEIFT DVDNYGNYSESDSTRTASTAYPAWGSSNSDVSVNVYSTPNWSFGLGWGYPYYGWGYGGYWGGGYWGAGWGYPGYAWGYPG YWGPGWGYPGYWGGGYYGNYSYSYGRRGSAAYYNNRYYSSNRAYASNRNYLSNRNYSTNRNSFSNRNSYTTNRNYTNRSN SYSDYRRSSSVNGRTYDSSSPNFTNRRSYSTQGQNSTYDYSNRRSSSSTMPSNRSYNNSSNSNSSRSYSPSPSRSMNSGG GSMRSSGGGGGGGGRSYGGGGGGRR >Mature_345_residues MKTYTTLRQNSSHFYLIGLLSFLLASCGSYQNTSYYDSDGVYGNSTNRYAQTNNTTAANNQYRDYFRSLQEDDQPTEIFT DVDNYGNYSESDSTRTASTAYPAWGSSNSDVSVNVYSTPNWSFGLGWGYPYYGWGYGGYWGGGYWGAGWGYPGYAWGYPG YWGPGWGYPGYWGGGYYGNYSYSYGRRGSAAYYNNRYYSSNRAYASNRNYLSNRNYSTNRNSFSNRNSYTTNRNYTNRSN SYSDYRRSSSVNGRTYDSSSPNFTNRRSYSTQGQNSTYDYSNRRSSSSTMPSNRSYNNSSNSNSSRSYSPSPSRSMNSGG GSMRSSGGGGGGGGRSYGGGGGGRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38446; Mature: 38446
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTYTTLRQNSSHFYLIGLLSFLLASCGSYQNTSYYDSDGVYGNSTNRYAQTNNTTAANN CCCCCCHHCCCCCEEHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCH QYRDYFRSLQEDDQPTEIFTDVDNYGNYSESDSTRTASTAYPAWGSSNSDVSVNVYSTPN HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC WSFGLGWGYPYYGWGYGGYWGGGYWGAGWGYPGYAWGYPGYWGPGWGYPGYWGGGYYGNY CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SYSYGRRGSAAYYNNRYYSSNRAYASNRNYLSNRNYSTNRNSFSNRNSYTTNRNYTNRSN CCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SYSDYRRSSSVNGRTYDSSSPNFTNRRSYSTQGQNSTYDYSNRRSSSSTMPSNRSYNNSS CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NSNSSRSYSPSPSRSMNSGGGSMRSSGGGGGGGGRSYGGGGGGRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTYTTLRQNSSHFYLIGLLSFLLASCGSYQNTSYYDSDGVYGNSTNRYAQTNNTTAANN CCCCCCHHCCCCCEEHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCEEECCCCCCCCH QYRDYFRSLQEDDQPTEIFTDVDNYGNYSESDSTRTASTAYPAWGSSNSDVSVNVYSTPN HHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC WSFGLGWGYPYYGWGYGGYWGGGYWGAGWGYPGYAWGYPGYWGPGWGYPGYWGGGYYGNY CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SYSYGRRGSAAYYNNRYYSSNRAYASNRNYLSNRNYSTNRNSFSNRNSYTTNRNYTNRSN CCCCCCCCCCEEECCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SYSDYRRSSSVNGRTYDSSSPNFTNRRSYSTQGQNSTYDYSNRRSSSSTMPSNRSYNNSS CHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC NSNSSRSYSPSPSRSMNSGGGSMRSSGGGGGGGGRSYGGGGGGRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA