| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302657
Identifier: 146302657
GI number: 146302657
Start: 5954216
End: 5955076
Strand: Reverse
Name: 146302657
Synonym: Fjoh_4930
Alternate gene names: NA
Gene position: 5955076-5954216 (Counterclockwise)
Preceding gene: 146302658
Following gene: 146302655
Centisome position: 97.67
GC content: 31.71
Gene sequence:
>861_bases ATGAAAAAAACTTTTTTAATAGCCGTTTCTATAGTATTATTAGCTTGCCAGCAGCAATCAGGCAACGATTTGAAAATGCT TTATTCGCTTCCGAAGAAATTAAAAGAAGTTTCTGGAATTACTTATTTTCCTGAAACCAATATAATTTACACTCTTGAAG ACAGCGGTAATAAAAATGCTCTTTATGCCATTAATTCTAAAGGGAAATTACAAAAAACGATTACAATCTCGAACGCTTCA AATGTTGATTGGGAAGATATTACAAAAGATAAAGCCGGTAATATTTATATTGGGGATTTTGGAAACAATGATAACAAACG CAGAGATTTGTGTATTTACAAAGTTGCCAAAAATCAGTTAAGTAAAGATGCGGCTTCCGCCGAATATAAAATCTCATTTT CTTATCCTGAACAAACTGAATTTCCGCCAAAGAAAAAAGAAATGTTTTATGATGTGGAAGGTTTTTTTGAACAAAATGGC TATTTCTACCTTTTTACAAAAAACAGAAGCAAAGGTTTTGACGGAACAGCTTTTATCTACAAAATCAAAAATGCAGCCGG AACTCAAAAAGCCGTAAAAATAGGAGAGTTTAAAACCTGCAATAATTACAATCATTGTGTTTTGACCAGTGCGTCAATAA GTCCTGACGGAAAAAAAGTGGCTTTGTTAAGCCACGATAAAGTTCTTTTATTTAAAGGTTTTAAAGGAGATTTATTTCAC AAAGGAACTCAAACCCAAATAGAATTAAATCATTTTTCTCAAAAAGAAGCAATAGTTTTCAAAGACAATAATACCTTGCT TATCGCAGATGAAAAAGCCGATAAAATAGGAGGGAACGTCTACGAATTTAAATTGAAATAA
Upstream 100 bases:
>100_bases CTTAGTTTAAAGTTTTTAGGCTGTAGATTTCAAAGATTAAAATGGATTTTTTGCAATTCTTTAATCCTTATAATCTGTGC CTGAACAAAAAAACAATCTT
Downstream 100 bases:
>100_bases AAAGTTTGCCACGAATTACACAAATTTTCACTAATTTTTATTTTAAATATAATTCGTGGAAATTTGTGTAATTCGTGGCA AAAAAAACTTTGAACCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MKKTFLIAVSIVLLACQQQSGNDLKMLYSLPKKLKEVSGITYFPETNIIYTLEDSGNKNALYAINSKGKLQKTITISNAS NVDWEDITKDKAGNIYIGDFGNNDNKRRDLCIYKVAKNQLSKDAASAEYKISFSYPEQTEFPPKKKEMFYDVEGFFEQNG YFYLFTKNRSKGFDGTAFIYKIKNAAGTQKAVKIGEFKTCNNYNHCVLTSASISPDGKKVALLSHDKVLLFKGFKGDLFH KGTQTQIELNHFSQKEAIVFKDNNTLLIADEKADKIGGNVYEFKLK
Sequences:
>Translated_286_residues MKKTFLIAVSIVLLACQQQSGNDLKMLYSLPKKLKEVSGITYFPETNIIYTLEDSGNKNALYAINSKGKLQKTITISNAS NVDWEDITKDKAGNIYIGDFGNNDNKRRDLCIYKVAKNQLSKDAASAEYKISFSYPEQTEFPPKKKEMFYDVEGFFEQNG YFYLFTKNRSKGFDGTAFIYKIKNAAGTQKAVKIGEFKTCNNYNHCVLTSASISPDGKKVALLSHDKVLLFKGFKGDLFH KGTQTQIELNHFSQKEAIVFKDNNTLLIADEKADKIGGNVYEFKLK >Mature_286_residues MKKTFLIAVSIVLLACQQQSGNDLKMLYSLPKKLKEVSGITYFPETNIIYTLEDSGNKNALYAINSKGKLQKTITISNAS NVDWEDITKDKAGNIYIGDFGNNDNKRRDLCIYKVAKNQLSKDAASAEYKISFSYPEQTEFPPKKKEMFYDVEGFFEQNG YFYLFTKNRSKGFDGTAFIYKIKNAAGTQKAVKIGEFKTCNNYNHCVLTSASISPDGKKVALLSHDKVLLFKGFKGDLFH KGTQTQIELNHFSQKEAIVFKDNNTLLIADEKADKIGGNVYEFKLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32291; Mature: 32291
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTFLIAVSIVLLACQQQSGNDLKMLYSLPKKLKEVSGITYFPETNIIYTLEDSGNKNA CCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCCCCE LYAINSKGKLQKTITISNASNVDWEDITKDKAGNIYIGDFGNNDNKRRDLCIYKVAKNQL EEEECCCCCEEEEEEECCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEHHHHH SKDAASAEYKISFSYPEQTEFPPKKKEMFYDVEGFFEQNGYFYLFTKNRSKGFDGTAFIY CCCCCCCEEEEEECCCCCCCCCCCHHHEEEEEEHEEECCCEEEEEECCCCCCCCCEEEEE KIKNAAGTQKAVKIGEFKTCNNYNHCVLTSASISPDGKKVALLSHDKVLLFKGFKGDLFH EEECCCCCCCEEEECCEEECCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCEEE KGTQTQIELNHFSQKEAIVFKDNNTLLIADEKADKIGGNVYEFKLK CCCCEEEEEECCCCCEEEEEECCCEEEEECCCCHHCCCCEEEEEEC >Mature Secondary Structure MKKTFLIAVSIVLLACQQQSGNDLKMLYSLPKKLKEVSGITYFPETNIIYTLEDSGNKNA CCCEEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCCCCE LYAINSKGKLQKTITISNASNVDWEDITKDKAGNIYIGDFGNNDNKRRDLCIYKVAKNQL EEEECCCCCEEEEEEECCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEEHHHHH SKDAASAEYKISFSYPEQTEFPPKKKEMFYDVEGFFEQNGYFYLFTKNRSKGFDGTAFIY CCCCCCCEEEEEECCCCCCCCCCCHHHEEEEEEHEEECCCEEEEEECCCCCCCCCEEEEE KIKNAAGTQKAVKIGEFKTCNNYNHCVLTSASISPDGKKVALLSHDKVLLFKGFKGDLFH EEECCCCCCCEEEECCEEECCCCCEEEEEECCCCCCCCEEEEEECCEEEEEECCCCCEEE KGTQTQIELNHFSQKEAIVFKDNNTLLIADEKADKIGGNVYEFKLK CCCCEEEEEECCCCCEEEEEECCCEEEEECCCCHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA