| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302658
Identifier: 146302658
GI number: 146302658
Start: 5955167
End: 5956219
Strand: Reverse
Name: 146302658
Synonym: Fjoh_4931
Alternate gene names: NA
Gene position: 5956219-5955167 (Counterclockwise)
Preceding gene: 146302662
Following gene: 146302657
Centisome position: 97.69
GC content: 32.95
Gene sequence:
>1053_bases ATGAGCGAACCTTTAATGGTGTTAAAAAAACCGTCTTTTCCTTTAACACAGCCACTTTTAAGTTATTTAGACAGATTCGA ACGTATTTCGAAAGTTTCTGTGTTTTATGATGACTTACTGCGGTTTTCCGGTTCGATTAATGTTTACGATAAAAATGAAA CCGATACCTTGTGGATTCGGGTTTATTACAGTGAATTTGAAAGAAATGAAATCGATCTAAATCTCAAAAAAATCTATTCT CTTTTACATTCTGATGGGAACAATGAGATCATTCAGTATTTAAATGTCGATGCCATTGATTATTGCACTTTTGGAAATTC AAAACCATTTCGAATTAAAGTAAGAAATATTCTAAACGACAATTACGTTCATTTTTATATAAAAAAGGCCGATGCTTCGA GAATTTACGGATTAGAATTAGAAGATATACTTTCGCCGGACAAAATCAACTTTTTGGTTTACAACGATACTTTAATCGAA GAACATATTATTGGGATTCCGGGCGATGTTTTTATGGATACGCTGCTTGATAAGTGTACCGAAATGGAAAAAGCGCAAAT AGCCAAAGAGTTTGTAAAATTCAACGAACGTTGTATGATTAGGCTTTTGGGCGATATGAGAGCGTACAATTATGTAATTG TCCCAATTCACGATTTTGATCAGGTAGTTTATAAAATACGTCCAATTGATTTTGACCAGCAATGCTACGAAGGTAATTTC AAAGTTTATCGTCCGCAGTTTTTCAAGGAAAATTATCCAATGATTAAGCTGATTAAAGAGAAATTAGAAGAACGTTCAAT TATTCAGTACAAAGACGAAGAAAGAGCGATTCTCGCAAAACGTATACATTCAGCCGAGACAAGAATAAAAAAATTACTGA ATATAATGTGCCACGATACGATTTCGACACAAGAACATTTAGATCAGTTAAAAATGGAATTGTACCGATATACCAACGAT ATGAAATTTAAAAATGCCAAATCGATGGGACATATCATGCACGCCGCTTTTGAATTCATTACACGTAATTTTAAAAACAC AAACTTAGTTTAA
Upstream 100 bases:
>100_bases TCGGTTTTAGTTTTAAGTAAGACGAATCAACTTACATATTGTTACGCCAAATTTATTTTTATAATCTTATTGATGTAAAT TTGTAATAAAGATATTCAAA
Downstream 100 bases:
>100_bases AGTTTTTAGGCTGTAGATTTCAAAGATTAAAATGGATTTTTTGCAATTCTTTAATCCTTATAATCTGTGCCTGAACAAAA AAACAATCTTATGAAAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSEPLMVLKKPSFPLTQPLLSYLDRFERISKVSVFYDDLLRFSGSINVYDKNETDTLWIRVYYSEFERNEIDLNLKKIYS LLHSDGNNEIIQYLNVDAIDYCTFGNSKPFRIKVRNILNDNYVHFYIKKADASRIYGLELEDILSPDKINFLVYNDTLIE EHIIGIPGDVFMDTLLDKCTEMEKAQIAKEFVKFNERCMIRLLGDMRAYNYVIVPIHDFDQVVYKIRPIDFDQQCYEGNF KVYRPQFFKENYPMIKLIKEKLEERSIIQYKDEERAILAKRIHSAETRIKKLLNIMCHDTISTQEHLDQLKMELYRYTND MKFKNAKSMGHIMHAAFEFITRNFKNTNLV
Sequences:
>Translated_350_residues MSEPLMVLKKPSFPLTQPLLSYLDRFERISKVSVFYDDLLRFSGSINVYDKNETDTLWIRVYYSEFERNEIDLNLKKIYS LLHSDGNNEIIQYLNVDAIDYCTFGNSKPFRIKVRNILNDNYVHFYIKKADASRIYGLELEDILSPDKINFLVYNDTLIE EHIIGIPGDVFMDTLLDKCTEMEKAQIAKEFVKFNERCMIRLLGDMRAYNYVIVPIHDFDQVVYKIRPIDFDQQCYEGNF KVYRPQFFKENYPMIKLIKEKLEERSIIQYKDEERAILAKRIHSAETRIKKLLNIMCHDTISTQEHLDQLKMELYRYTND MKFKNAKSMGHIMHAAFEFITRNFKNTNLV >Mature_349_residues SEPLMVLKKPSFPLTQPLLSYLDRFERISKVSVFYDDLLRFSGSINVYDKNETDTLWIRVYYSEFERNEIDLNLKKIYSL LHSDGNNEIIQYLNVDAIDYCTFGNSKPFRIKVRNILNDNYVHFYIKKADASRIYGLELEDILSPDKINFLVYNDTLIEE HIIGIPGDVFMDTLLDKCTEMEKAQIAKEFVKFNERCMIRLLGDMRAYNYVIVPIHDFDQVVYKIRPIDFDQQCYEGNFK VYRPQFFKENYPMIKLIKEKLEERSIIQYKDEERAILAKRIHSAETRIKKLLNIMCHDTISTQEHLDQLKMELYRYTNDM KFKNAKSMGHIMHAAFEFITRNFKNTNLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41724; Mature: 41593
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPLMVLKKPSFPLTQPLLSYLDRFERISKVSVFYDDLLRFSGSINVYDKNETDTLWIR CCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE VYYSEFERNEIDLNLKKIYSLLHSDGNNEIIQYLNVDAIDYCTFGNSKPFRIKVRNILND EEEHHCCCCCCCEEHHHHHHHHHCCCCCHHHHEECCCCEEEEECCCCCCEEEEEEECCCC NYVHFYIKKADASRIYGLELEDILSPDKINFLVYNDTLIEEHIIGIPGDVFMDTLLDKCT CEEEEEEEECCCCEEECCCHHHHCCCCCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHHH EMEKAQIAKEFVKFNERCMIRLLGDMRAYNYVIVPIHDFDQVVYKIRPIDFDQQCYEGNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHEECCCCCCHHHHCCCC KVYRPQFFKENYPMIKLIKEKLEERSIIQYKDEERAILAKRIHSAETRIKKLLNIMCHDT EEECCHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC ISTQEHLDQLKMELYRYTNDMKFKNAKSMGHIMHAAFEFITRNFKNTNLV CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SEPLMVLKKPSFPLTQPLLSYLDRFERISKVSVFYDDLLRFSGSINVYDKNETDTLWIR CCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEE VYYSEFERNEIDLNLKKIYSLLHSDGNNEIIQYLNVDAIDYCTFGNSKPFRIKVRNILND EEEHHCCCCCCCEEHHHHHHHHHCCCCCHHHHEECCCCEEEEECCCCCCEEEEEEECCCC NYVHFYIKKADASRIYGLELEDILSPDKINFLVYNDTLIEEHIIGIPGDVFMDTLLDKCT CEEEEEEEECCCCEEECCCHHHHCCCCCEEEEEEECHHHHHHHCCCCHHHHHHHHHHHHH EMEKAQIAKEFVKFNERCMIRLLGDMRAYNYVIVPIHDFDQVVYKIRPIDFDQQCYEGNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHEECCCCCCHHHHCCCC KVYRPQFFKENYPMIKLIKEKLEERSIIQYKDEERAILAKRIHSAETRIKKLLNIMCHDT EEECCHHHHCCCCHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCC ISTQEHLDQLKMELYRYTNDMKFKNAKSMGHIMHAAFEFITRNFKNTNLV CCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA