Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146302650

Identifier: 146302650

GI number: 146302650

Start: 5943474

End: 5943833

Strand: Direct

Name: 146302650

Synonym: Fjoh_4923

Alternate gene names: NA

Gene position: 5943474-5943833 (Clockwise)

Preceding gene: 146302649

Following gene: 146302651

Centisome position: 97.48

GC content: 28.61

Gene sequence:

>360_bases
ATGAAAACATTTAGAGACCTCTTGATTTGGCAAAAATCAATGAACTTAGTTACCGAAATTTACCTATTAACCAATTCATT
TCCGAAAGAAGAAATTTATGGACTATCTTCACAAATCAGAAGATGTTCAATATCAATACCGAGTAATATTGCTGAAGGTT
ATGGCAGAGATGGGAATAATGATTATCTGAGATTTTTAAATATTTCTATTTCATCCTTATTCGAAATGCAGACTCAGCTT
GAAATTTCATTCAATTTAAAATACATAACGGAGAATCAATTCAATAAAATTAATGGAGAAAGCAGAGAATTAGAACGAAT
GTTAAGTTCTTTTATTCGAAGAATAAAAGACAGAAAATAA

Upstream 100 bases:

>100_bases
AGGTTCAAAGAGGCAAAGGTTCAGAGGTTTTTATTTTAAAATCTTTGATTTTAAAATGTAAGAATATTTTTATTTTTGTG
TTTAATTTTTAAATACATAA

Downstream 100 bases:

>100_bases
CCTTTGTCCCTTTGAACCTCTGCAACTCTGAACCTATAAACACATGATTAATCTTTTCAACACCCACATCGACACGCTGG
CAATACACCGCGTGGGAAAC

Product: S23 ribosomal protein

Products: NA

Alternate protein names: S23 Ribosomal; 23S Ribosomal Protein; 30S Ribosomal Protein S; 23S Ribosomal RNA Protein; Intervening Sequence

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKTFRDLLIWQKSMNLVTEIYLLTNSFPKEEIYGLSSQIRRCSISIPSNIAEGYGRDGNNDYLRFLNISISSLFEMQTQL
EISFNLKYITENQFNKINGESRELERMLSSFIRRIKDRK

Sequences:

>Translated_119_residues
MKTFRDLLIWQKSMNLVTEIYLLTNSFPKEEIYGLSSQIRRCSISIPSNIAEGYGRDGNNDYLRFLNISISSLFEMQTQL
EISFNLKYITENQFNKINGESRELERMLSSFIRRIKDRK
>Mature_119_residues
MKTFRDLLIWQKSMNLVTEIYLLTNSFPKEEIYGLSSQIRRCSISIPSNIAEGYGRDGNNDYLRFLNISISSLFEMQTQL
EISFNLKYITENQFNKINGESRELERMLSSFIRRIKDRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14100; Mature: 14100

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTFRDLLIWQKSMNLVTEIYLLTNSFPKEEIYGLSSQIRRCSISIPSNIAEGYGRDGNN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCC
DYLRFLNISISSLFEMQTQLEISFNLKYITENQFNKINGESRELERMLSSFIRRIKDRK
CEEEEEHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKTFRDLLIWQKSMNLVTEIYLLTNSFPKEEIYGLSSQIRRCSISIPSNIAEGYGRDGNN
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHEECCCCCCHHHHHCCCCCCC
DYLRFLNISISSLFEMQTQLEISFNLKYITENQFNKINGESRELERMLSSFIRRIKDRK
CEEEEEHHHHHHHHHHHHHEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA