Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302649

Identifier: 146302649

GI number: 146302649

Start: 5942815

End: 5943357

Strand: Direct

Name: 146302649

Synonym: Fjoh_4922

Alternate gene names: NA

Gene position: 5942815-5943357 (Clockwise)

Preceding gene: 146302648

Following gene: 146302650

Centisome position: 97.47

GC content: 36.46

Gene sequence:

>543_bases
ATGGTTTATAAATTTAGAGTAATTCTAGACGCCGAAGAAGATATTTTTAGAGACATTGCAATTCTTGAAGACGATACTCT
TGAAGATTTACACAATGCAATCTTCAACGCTTTTGGTTTTGACGGATCTGAAGTGGCTTCATTCTATACTTGTGATGAAA
CTTGGAATCAGGAAGATGAAATTCCTCTTTTTGATACAGGAGATGTTCCTGGCGAAATAAGAACCATGAACGATTATCCG
TTGTCTAGTATTTTAGATAAACAAAATACAAAGATTATCTACGTTTACGATTTCATCAGCATGTGGACTTTCTTAGTAGA
ATTAGCTGCTGTTGAAGATGAAGCTGTTGGAGCAACTTACCCGGAAACTTTATTTTCTCATGGTGAAATGCCAGACGAAG
CTCTTGAAAAAAACTTTGAAGCTGATGATATGCACAACGATATCTACGGAGAATTTGAAGACGACCTAGATGAAGACGAT
CTAGACATGTTCGAAGGAGATGACAGTTTCGAGGATTATGGATTTGAGGAGAATTGGAATTAG

Upstream 100 bases:

>100_bases
TAATCAGAAAAATGAAAAAATCTTTTCAACAAATCGTAATTCACAATTCGGATTTCGTTTTTTATATTTTACCTTTGACC
TCTCAATAAAAACAAAGATT

Downstream 100 bases:

>100_bases
TTTTCCTTAGGTACAAAGGTTCAAAGAGGCAAAGGTTCAGAGGTTTTTATTTTAAAATCTTTGATTTTAAAATGTAAGAA
TATTTTTATTTTTGTGTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDEIPLFDTGDVPGEIRTMNDYP
LSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATYPETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDD
LDMFEGDDSFEDYGFEENWN

Sequences:

>Translated_180_residues
MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDEIPLFDTGDVPGEIRTMNDYP
LSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATYPETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDD
LDMFEGDDSFEDYGFEENWN
>Mature_180_residues
MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDEIPLFDTGDVPGEIRTMNDYP
LSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATYPETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDD
LDMFEGDDSFEDYGFEENWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20900; Mature: 20900

Theoretical pI: Translated: 3.39; Mature: 3.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDE
CEEEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCCCC
IPLFDTGDVPGEIRTMNDYPLSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATY
CCEEECCCCCCCEEECCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCC
PETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDDLDMFEGDDSFEDYGFEENWN
HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCC
>Mature Secondary Structure
MVYKFRVILDAEEDIFRDIAILEDDTLEDLHNAIFNAFGFDGSEVASFYTCDETWNQEDE
CEEEEEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHEEEECCCCCCCCCC
IPLFDTGDVPGEIRTMNDYPLSSILDKQNTKIIYVYDFISMWTFLVELAAVEDEAVGATY
CCEEECCCCCCCEEECCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCC
PETLFSHGEMPDEALEKNFEADDMHNDIYGEFEDDLDEDDLDMFEGDDSFEDYGFEENWN
HHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA