| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302616
Identifier: 146302616
GI number: 146302616
Start: 5910666
End: 5911943
Strand: Direct
Name: 146302616
Synonym: Fjoh_4889
Alternate gene names: NA
Gene position: 5910666-5911943 (Clockwise)
Preceding gene: 146302615
Following gene: 146302617
Centisome position: 96.95
GC content: 32.86
Gene sequence:
>1278_bases ATGAAAACAAAATTACGAATTGTATTTTTCGCTCTGATTACCAGCTTTTTTATACACGCCCAGCAGCAGCCAAAAGGAAT TATTGGAACTACAAACTGGATGAACAATTGGACAAATTTTAAACCAGCCATAAATGAATATAACGAAGCAACTAATATAA TTGCCGGAACAATTGATAAAGATACCCGCTTAGTTAAGCGTAATACGTATCATTTAGTTGGTGTTGTGTATGTTACCAAT AATGCTACTTTAACCATAGAACCGGGAACAGTAATTCGAGGCGATGATAAAACCTGCGGCACTCTTGTAATTACAAACGG AGCAAAAATTATGGCTGAAGGTCTTGAAACTGACCCAATTGTTTTTACATCAGAAAATGAAAAAAACAATAGAAAGCCAG GCGACTGGGGCGGGATTATTATTTTAGGAAAAGCGCCTATAAATACTTTGGGAGGCATTCACACTTTACCTTTTGATTTA GAACCAACCCTAAATCATTATGGAGGTCAGGACCCAGAAGATAATTCTGGAGTTATGAAATATGTTAGAATTGAATATGC AGGACGAAAATTAAGTGCTTCTAAAGAGTTAAACGGACTTTCTTTAGCCGGAGTGGGAAGAAAAACAGTTTTAAGCAATA TTCAAATCAGTTTTTCAAATGATGATTCTTTTGAATGTTATGGAGGTGACCTGAATATGAGTAACTTAATCTCATACAGA ACAACTGATGATGATTTTGATTTTACACAAGGTGCACAAATCAATATTACTAACAGTATTGCTGTTCGTCATCCGTTCTC ATCAGATATCTCAGGATCAAGATGTTTTGAAGTAGATTCATACGATAAAGTTCAAAATACAGATATGAGCAAAAAAATGA CCAAAATTAATGCTTCAAATATCACTTTAATAAATTTAGAAGAAAACAATCAGGGCTTAGTTAGAGAATCTATTTATGTA AGAGAAAATACATTTTTTAACTTAAACAATAGCATTGTTTCTGGTTTTTCACCTTTTGTTTTATTAGAAGGAAACATTGG AAACGGAAATGAAAACTTAGCAAAAATGAGTTTTAAAAATACCATAGTTAACAATTGTAACGGAGGAATTACGAGCGAAT CTTCAAGTTCAGATGCATCAATTCAAAATTTTTACAATCCAAATTCTGGTCTTGAATACACAAAAATGAAAAATATAGAA TTGTTTATAACGCCAAACATCAAAGGAAACCCAGATTTTAGAGCAAACGTAAACAACACGCTGGCAATTGGAAATTAA
Upstream 100 bases:
>100_bases AATAACACTTTCATAACAACCATCCCCGTATTGATTAACATACGGCCTCTAATTTTGAGGAAAATAAAAACTCAAAAACT AGAAACTCAAAATTATAGTT
Downstream 100 bases:
>100_bases GTTTTTAGTCAAAAGTTAGAATTTAAAATTTAACAAATTTCAAAGATTAGAAAAGTTTTTTTTGAAAATTTATGTATTCT AATTCAAATTACATTTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein; Serine/Threonine Protein Kinase; Cell Surface Receptor IPT/TIG Domain Protein; Secreted Protein; Drug/Metabolite Permease; Non-Specific Serine/Threonine Protein Kinase; Parallel Beta-Helix Repeat Protein
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MKTKLRIVFFALITSFFIHAQQQPKGIIGTTNWMNNWTNFKPAINEYNEATNIIAGTIDKDTRLVKRNTYHLVGVVYVTN NATLTIEPGTVIRGDDKTCGTLVITNGAKIMAEGLETDPIVFTSENEKNNRKPGDWGGIIILGKAPINTLGGIHTLPFDL EPTLNHYGGQDPEDNSGVMKYVRIEYAGRKLSASKELNGLSLAGVGRKTVLSNIQISFSNDDSFECYGGDLNMSNLISYR TTDDDFDFTQGAQINITNSIAVRHPFSSDISGSRCFEVDSYDKVQNTDMSKKMTKINASNITLINLEENNQGLVRESIYV RENTFFNLNNSIVSGFSPFVLLEGNIGNGNENLAKMSFKNTIVNNCNGGITSESSSSDASIQNFYNPNSGLEYTKMKNIE LFITPNIKGNPDFRANVNNTLAIGN
Sequences:
>Translated_425_residues MKTKLRIVFFALITSFFIHAQQQPKGIIGTTNWMNNWTNFKPAINEYNEATNIIAGTIDKDTRLVKRNTYHLVGVVYVTN NATLTIEPGTVIRGDDKTCGTLVITNGAKIMAEGLETDPIVFTSENEKNNRKPGDWGGIIILGKAPINTLGGIHTLPFDL EPTLNHYGGQDPEDNSGVMKYVRIEYAGRKLSASKELNGLSLAGVGRKTVLSNIQISFSNDDSFECYGGDLNMSNLISYR TTDDDFDFTQGAQINITNSIAVRHPFSSDISGSRCFEVDSYDKVQNTDMSKKMTKINASNITLINLEENNQGLVRESIYV RENTFFNLNNSIVSGFSPFVLLEGNIGNGNENLAKMSFKNTIVNNCNGGITSESSSSDASIQNFYNPNSGLEYTKMKNIE LFITPNIKGNPDFRANVNNTLAIGN >Mature_425_residues MKTKLRIVFFALITSFFIHAQQQPKGIIGTTNWMNNWTNFKPAINEYNEATNIIAGTIDKDTRLVKRNTYHLVGVVYVTN NATLTIEPGTVIRGDDKTCGTLVITNGAKIMAEGLETDPIVFTSENEKNNRKPGDWGGIIILGKAPINTLGGIHTLPFDL EPTLNHYGGQDPEDNSGVMKYVRIEYAGRKLSASKELNGLSLAGVGRKTVLSNIQISFSNDDSFECYGGDLNMSNLISYR TTDDDFDFTQGAQINITNSIAVRHPFSSDISGSRCFEVDSYDKVQNTDMSKKMTKINASNITLINLEENNQGLVRESIYV RENTFFNLNNSIVSGFSPFVLLEGNIGNGNENLAKMSFKNTIVNNCNGGITSESSSSDASIQNFYNPNSGLEYTKMKNIE LFITPNIKGNPDFRANVNNTLAIGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46833; Mature: 46833
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKLRIVFFALITSFFIHAQQQPKGIIGTTNWMNNWTNFKPAINEYNEATNIIAGTIDK CCCEEEEHHHHHHHHHHHCCCCCCCCEEEECHHCCCCCCCCCCHHHHCCCCEEEEEECCC DTRLVKRNTYHLVGVVYVTNNATLTIEPGTVIRGDDKTCGTLVITNGAKIMAEGLETDPI CCEEEECCCEEEEEEEEEECCEEEEECCCEEEECCCCCCCEEEEECCCEEEECCCCCCCE VFTSENEKNNRKPGDWGGIIILGKAPINTLGGIHTLPFDLEPTLNHYGGQDPEDNSGVMK EEECCCCCCCCCCCCCCCEEEECCCCCHHCCCCEECCCCCCCHHHHCCCCCCCCCCCEEE YVRIEYAGRKLSASKELNGLSLAGVGRKTVLSNIQISFSNDDSFECYGGDLNMSNLISYR EEEEEECCCEECCCCCCCCEEEECCCCHHEEEEEEEEECCCCCEEEECCCCCHHHEEEEE TTDDDFDFTQGAQINITNSIAVRHPFSSDISGSRCFEVDSYDKVQNTDMSKKMTKINASN CCCCCCCCCCCCEEEEECEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHEEECCCC ITLINLEENNQGLVRESIYVRENTFFNLNNSIVSGFSPFVLLEGNIGNGNENLAKMSFKN EEEEEEECCCCCEEEEEEEEECCEEEECCCHHHCCCCCEEEEECCCCCCCCCEEEEEHHH TIVNNCNGGITSESSSSDASIQNFYNPNSGLEYTKMKNIELFITPNIKGNPDFRANVNNT HHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCEEECCCCE LAIGN EEECC >Mature Secondary Structure MKTKLRIVFFALITSFFIHAQQQPKGIIGTTNWMNNWTNFKPAINEYNEATNIIAGTIDK CCCEEEEHHHHHHHHHHHCCCCCCCCEEEECHHCCCCCCCCCCHHHHCCCCEEEEEECCC DTRLVKRNTYHLVGVVYVTNNATLTIEPGTVIRGDDKTCGTLVITNGAKIMAEGLETDPI CCEEEECCCEEEEEEEEEECCEEEEECCCEEEECCCCCCCEEEEECCCEEEECCCCCCCE VFTSENEKNNRKPGDWGGIIILGKAPINTLGGIHTLPFDLEPTLNHYGGQDPEDNSGVMK EEECCCCCCCCCCCCCCCEEEECCCCCHHCCCCEECCCCCCCHHHHCCCCCCCCCCCEEE YVRIEYAGRKLSASKELNGLSLAGVGRKTVLSNIQISFSNDDSFECYGGDLNMSNLISYR EEEEEECCCEECCCCCCCCEEEECCCCHHEEEEEEEEECCCCCEEEECCCCCHHHEEEEE TTDDDFDFTQGAQINITNSIAVRHPFSSDISGSRCFEVDSYDKVQNTDMSKKMTKINASN CCCCCCCCCCCCEEEEECEEEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHEEECCCC ITLINLEENNQGLVRESIYVRENTFFNLNNSIVSGFSPFVLLEGNIGNGNENLAKMSFKN EEEEEEECCCCCEEEEEEEEECCEEEECCCHHHCCCCCEEEEECCCCCCCCCEEEEEHHH TIVNNCNGGITSESSSSDASIQNFYNPNSGLEYTKMKNIELFITPNIKGNPDFRANVNNT HHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEECCEEEEECCCCCCCCCEEECCCCE LAIGN EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA