Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302615

Identifier: 146302615

GI number: 146302615

Start: 5909894

End: 5910460

Strand: Direct

Name: 146302615

Synonym: Fjoh_4888

Alternate gene names: NA

Gene position: 5909894-5910460 (Clockwise)

Preceding gene: 146302614

Following gene: 146302616

Centisome position: 96.93

GC content: 32.45

Gene sequence:

>567_bases
ATGAAAAATTTAAAAACAATTGCAATTGCATTATTCGTAGCTGCTGCTGGTATTTCAGTAAACGCACAAACTAAAAAAAT
CGACGTAAAAGCTTCTACTATTAAATGGGTAGGTAAAAAAGTAACTGGAGAGCACTCTGGAACTGTAAACTTCAAAGACG
GAGCTGTAGTTTTCAAAGGAAAAAAATTAACAGGTGGTTCATTTACTGTTGATATGACTTCATTAACAGCTACAGATTTA
ACTGGAGAATACCAAGGAAAATTAAACGGTCACTTAAAAGCTGACGATTTCTTTGGAACTGATAAATTCCCAACTTCTAA
ATTAGTTTTCAAAACTATTGGTGCTAAATCTGCTGACGTTTATACTGTAACTGCTGATTTAACTATTAAAGGAATTACTA
AACCAGTAACTTTTGATATCACTGTAAACGGAAACACTGCAACAACTGCTTTCAAAGTTGACAGAACTAAATACGATATT
AAATACAACTCTGGTAACTTCTTCGAAAACTTAGGAGACAAAACTATCAATGACGATTTCGAATTAGCTGTGTCTTTAAA
ATTCTAA

Upstream 100 bases:

>100_bases
ATGAAGACGATACGCAGCACTACAAAAAAGTTAGAAAATCTCACGAGGAATTATTTATCACTATATAATTATTTACAAAT
CTAAATTCAATTTTAACAAC

Downstream 100 bases:

>100_bases
TTAAAGCTTACTAATTCAATATTATAAGAAAAACCCCGGCAGTTTGATTCTGCCGGGGTTTCTTTTTTCTATTACTTTTC
ATAAAAATAACGTTCGTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: YCE I Like Family Protein; Ycei Family Protein; YceI Like Family Protein; Membrane Or Secreted YceI-Like Family Protein; Rhodanese-Like Domain Protein; Rhodanese Domain-Containing Protein; Rhodanese-Like Domain-Containing Protein

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MKNLKTIAIALFVAAAGISVNAQTKKIDVKASTIKWVGKKVTGEHSGTVNFKDGAVVFKGKKLTGGSFTVDMTSLTATDL
TGEYQGKLNGHLKADDFFGTDKFPTSKLVFKTIGAKSADVYTVTADLTIKGITKPVTFDITVNGNTATTAFKVDRTKYDI
KYNSGNFFENLGDKTINDDFELAVSLKF

Sequences:

>Translated_188_residues
MKNLKTIAIALFVAAAGISVNAQTKKIDVKASTIKWVGKKVTGEHSGTVNFKDGAVVFKGKKLTGGSFTVDMTSLTATDL
TGEYQGKLNGHLKADDFFGTDKFPTSKLVFKTIGAKSADVYTVTADLTIKGITKPVTFDITVNGNTATTAFKVDRTKYDI
KYNSGNFFENLGDKTINDDFELAVSLKF
>Mature_188_residues
MKNLKTIAIALFVAAAGISVNAQTKKIDVKASTIKWVGKKVTGEHSGTVNFKDGAVVFKGKKLTGGSFTVDMTSLTATDL
TGEYQGKLNGHLKADDFFGTDKFPTSKLVFKTIGAKSADVYTVTADLTIKGITKPVTFDITVNGNTATTAFKVDRTKYDI
KYNSGNFFENLGDKTINDDFELAVSLKF

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20256; Mature: 20256

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLKTIAIALFVAAAGISVNAQTKKIDVKASTIKWVGKKVTGEHSGTVNFKDGAVVFKG
CCCHHHHHHEEEHHHCCCEECCCEEEEEEEEHEEEEECCEECCCCCCEEEECCCEEEEEC
KKLTGGSFTVDMTSLTATDLTGEYQGKLNGHLKADDFFGTDKFPTSKLVFKTIGAKSADV
CEECCCEEEEEEEEEEEECCCCEECCEECCEEEECCCCCCCCCCCCCEEEEECCCCCCEE
YTVTADLTIKGITKPVTFDITVNGNTATTAFKVDRTKYDIKYNSGNFFENLGDKTINDDF
EEEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECEEEEEEECCCCHHHHCCCCCCCCCE
ELAVSLKF
EEEEEEEC
>Mature Secondary Structure
MKNLKTIAIALFVAAAGISVNAQTKKIDVKASTIKWVGKKVTGEHSGTVNFKDGAVVFKG
CCCHHHHHHEEEHHHCCCEECCCEEEEEEEEHEEEEECCEECCCCCCEEEECCCEEEEEC
KKLTGGSFTVDMTSLTATDLTGEYQGKLNGHLKADDFFGTDKFPTSKLVFKTIGAKSADV
CEECCCEEEEEEEEEEEECCCCEECCEECCEEEECCCCCCCCCCCCCEEEEECCCCCCEE
YTVTADLTIKGITKPVTFDITVNGNTATTAFKVDRTKYDIKYNSGNFFENLGDKTINDDF
EEEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECEEEEEEECCCCHHHHCCCCCCCCCE
ELAVSLKF
EEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA