| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is nfnB [C]
Identifier: 146302614
GI number: 146302614
Start: 5909229
End: 5909861
Strand: Direct
Name: nfnB [C]
Synonym: Fjoh_4887
Alternate gene names: 146302614
Gene position: 5909229-5909861 (Clockwise)
Preceding gene: 146302613
Following gene: 146302615
Centisome position: 96.92
GC content: 34.12
Gene sequence:
>633_bases ATGAGCACATTATTAGATAATCTAAAATGGAGATATGCAACAAAGAAGTTTGATGCAACAAAAAAAATATCTGCTGCAGA TTTAAATACTTTAAAAGAAGCTGTAAGATTAGCTGCTTCTTCATACGGATTACAACCTTATAAAGTAATTATTGTAGAAA ATCCAGAAATTAGAGAAAAGTTAAAAGCAGCAGCTTATGGACAAACTCAAATTACTGATGCTTCACAATTATTCATTTTT GCAAACGACTTAAACGCAGGACCAGAATCTGTTGCTGCTTACATTAAAAACATCAGCGAAACAAGAGGTGTTCCTGCTGA AGCTTTAGGCGGATTTGCTGATATGATGAATGGTGTAATTTCAAACTTATCACAAGAAGCTAAAAACATCTGGACAGCAA AACAAACTTATATTGCTTTAGGAACTTTATTAGCTGCGGCTGCAGAATTAAAAATCGACGCTACACCAATGGAAGGATTT AATCCTGCTGCGTTTAACGAGATCTTAGGTTTCGATAAATTAGGTTTAAACGCTTCGGTTATTGCAACTGTAGGTTACAG ACATGATGAAGACGATACGCAGCACTACAAAAAAGTTAGAAAATCTCACGAGGAATTATTTATCACTATATAA
Upstream 100 bases:
>100_bases GATGCGCACGAGCGTGCATTTGCCGAGAATATAAGTCCTGAAGAATTAGAATTATTAAATAAATTATTAGAAAAATACCG AACCCAACAAAATTAATATT
Downstream 100 bases:
>100_bases TTATTTACAAATCTAAATTCAATTTTAACAACATGAAAAATTTAAAAACAATTGCAATTGCATTATTCGTAGCTGCTGCT GGTATTTCAGTAAACGCACA
Product: nitroreductase
Products: NAD(P)(+); @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MSTLLDNLKWRYATKKFDATKKISAADLNTLKEAVRLAASSYGLQPYKVIIVENPEIREKLKAAAYGQTQITDASQLFIF ANDLNAGPESVAAYIKNISETRGVPAEALGGFADMMNGVISNLSQEAKNIWTAKQTYIALGTLLAAAAELKIDATPMEGF NPAAFNEILGFDKLGLNASVIATVGYRHDEDDTQHYKKVRKSHEELFITI
Sequences:
>Translated_210_residues MSTLLDNLKWRYATKKFDATKKISAADLNTLKEAVRLAASSYGLQPYKVIIVENPEIREKLKAAAYGQTQITDASQLFIF ANDLNAGPESVAAYIKNISETRGVPAEALGGFADMMNGVISNLSQEAKNIWTAKQTYIALGTLLAAAAELKIDATPMEGF NPAAFNEILGFDKLGLNASVIATVGYRHDEDDTQHYKKVRKSHEELFITI >Mature_209_residues STLLDNLKWRYATKKFDATKKISAADLNTLKEAVRLAASSYGLQPYKVIIVENPEIREKLKAAAYGQTQITDASQLFIFA NDLNAGPESVAAYIKNISETRGVPAEALGGFADMMNGVISNLSQEAKNIWTAKQTYIALGTLLAAAAELKIDATPMEGFN PAAFNEILGFDKLGLNASVIATVGYRHDEDDTQHYKKVRKSHEELFITI
Specific function: Reduction Of A Variety Of Nitroaromatic Compounds Using NADH (And To Lesser Extent Nadph) As Source Of Reducing Equivalents; Two Electrons Are Transferred. Capable Of Reducing Nitrofurazone, Quinones And The Anti-Tumor Agent Cb1954 (5- (Aziridin-1-Yl)-2,4
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitroreductase family [H]
Homologues:
Organism=Escherichia coli, GI1786792, Length=205, Percent_Identity=27.8048780487805, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000415 [H]
Pfam domain/function: PF00881 Nitroreductase [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 23004; Mature: 22873
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLLDNLKWRYATKKFDATKKISAADLNTLKEAVRLAASSYGLQPYKVIIVENPEIREK CCCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHH LKAAAYGQTQITDASQLFIFANDLNAGPESVAAYIKNISETRGVPAEALGGFADMMNGVI HHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SNLSQEAKNIWTAKQTYIALGTLLAAAAELKIDATPMEGFNPAAFNEILGFDKLGLNASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCHHCCCCCEE IATVGYRHDEDDTQHYKKVRKSHEELFITI EEEECCCCCCHHHHHHHHHHHHHHHEEEEC >Mature Secondary Structure STLLDNLKWRYATKKFDATKKISAADLNTLKEAVRLAASSYGLQPYKVIIVENPEIREK CCHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHH LKAAAYGQTQITDASQLFIFANDLNAGPESVAAYIKNISETRGVPAEALGGFADMMNGVI HHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH SNLSQEAKNIWTAKQTYIALGTLLAAAAELKIDATPMEGFNPAAFNEILGFDKLGLNASV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHCCHHCCCCCEE IATVGYRHDEDDTQHYKKVRKSHEELFITI EEEECCCCCCHHHHHHHHHHHHHHHEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: FMN. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NAD(P)H; 6,7-Dihydropteridine [C]
Specific reaction: NAD(P)H + 6,7-Dihydropteridine = NAD(P)(+) + @TETR01.txt*5,6,7,8-Tetrahydropteridine!. [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA