| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302607
Identifier: 146302607
GI number: 146302607
Start: 5902705
End: 5903373
Strand: Reverse
Name: 146302607
Synonym: Fjoh_4880
Alternate gene names: NA
Gene position: 5903373-5902705 (Counterclockwise)
Preceding gene: 146302632
Following gene: 146302606
Centisome position: 96.83
GC content: 32.74
Gene sequence:
>669_bases ATGTGTTTAAACTTGAGCAATTACGCTTTAAGCTTTAATTTTGCATATGACGAATGTCATTTCAAAATAAAAAAGAAAAT GAACACAAAAGACTTATTGGATCAAATTGCTTTTATAAAAGAAATTGATAAAGTAAAATACATTCAGCGCAAAACAAAAT TATTCAACAGCGACAGATGTGAAAATGATGCAGAACACAGCTGGCATCTGGCGTTAATGGCAATTGTTCTGGCAGAACAT TCTAATGAACCTATTGACGTTTTGAAAGTTGTAAAAATGGTTTTGATTCATGATATTGTAGAAATCGATGCGGGAGATGT TTTTATTTACGATACAGTAAAAAATCACTCAAATACTGATGAGGAAAGATTAGCCGCAAACAGAATCTTTGGTTTACTGC CAAAAAATCAAGCCGAAGAATTTATTTCAATCTGGGAAGAATTTGAAGCGGGAGAAACCAACGAAGCTAAATTTGCCAGA TCTATGGACAGATTAGAACCTTTATTGCAGAATACGTCTAACAATGGCGGCACCTGGAAAGAATTTGGAGTGAAATATGA CAAAGTCTATGAAAAGAAAAGTATCATAAAAGAAGGCTCAAAATCGATATGGAATTATGCCGAAGGTTTGATTAATGAAA GTGTAGAAAAAGGGATTTTAGAAAAATAA
Upstream 100 bases:
>100_bases ACAAAGGTAGTTTTGTTTTTTAAAAAAATAGGTGACTAATGTTACAGAAATTAGGTTTTTGTGTAAAATAATGCGGATTT TGTCATATGCTTTAATATAA
Downstream 100 bases:
>100_bases TCACGTAATCAAACAGAATATGCGGTTTCAACCGCAGGACTCATGCTTAATCACAATACGTTTCCCGTGGTTGAAACCAC GGGCTATGTTTAAATGCTCA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: Metal-Dependent Phosphohydrolase; HD Domain Protein; HD Domain-Containing Protein; Metal-Dependent Phosphohydrolase HD Subdomain; HD Superfamily Hydrolase; Hydrolase; Xin-Antitoxin System Toxin Component PIN Family; Metal-Dependent Phosphohydrolase HD Region; HD Superfamily Hydrolase-Like Protein; HAD Superfamily Hydrolase; Hydrolases Of HD Superfamily; Hydrolase Of HD Superfamily; Metal-Dependent Phosphoesterase; HD Superfamily Metal-Dependent Phosphohydrolase; HD Domain-Containing; HDDC2 Protein
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MCLNLSNYALSFNFAYDECHFKIKKKMNTKDLLDQIAFIKEIDKVKYIQRKTKLFNSDRCENDAEHSWHLALMAIVLAEH SNEPIDVLKVVKMVLIHDIVEIDAGDVFIYDTVKNHSNTDEERLAANRIFGLLPKNQAEEFISIWEEFEAGETNEAKFAR SMDRLEPLLQNTSNNGGTWKEFGVKYDKVYEKKSIIKEGSKSIWNYAEGLINESVEKGILEK
Sequences:
>Translated_222_residues MCLNLSNYALSFNFAYDECHFKIKKKMNTKDLLDQIAFIKEIDKVKYIQRKTKLFNSDRCENDAEHSWHLALMAIVLAEH SNEPIDVLKVVKMVLIHDIVEIDAGDVFIYDTVKNHSNTDEERLAANRIFGLLPKNQAEEFISIWEEFEAGETNEAKFAR SMDRLEPLLQNTSNNGGTWKEFGVKYDKVYEKKSIIKEGSKSIWNYAEGLINESVEKGILEK >Mature_222_residues MCLNLSNYALSFNFAYDECHFKIKKKMNTKDLLDQIAFIKEIDKVKYIQRKTKLFNSDRCENDAEHSWHLALMAIVLAEH SNEPIDVLKVVKMVLIHDIVEIDAGDVFIYDTVKNHSNTDEERLAANRIFGLLPKNQAEEFISIWEEFEAGETNEAKFAR SMDRLEPLLQNTSNNGGTWKEFGVKYDKVYEKKSIIKEGSKSIWNYAEGLINESVEKGILEK
Specific function: Unknown
COG id: COG1896
COG function: function code R; Predicted hydrolases of HD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25688; Mature: 25688
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCLNLSNYALSFNFAYDECHFKIKKKMNTKDLLDQIAFIKEIDKVKYIQRKTKLFNSDRC CCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ENDAEHSWHLALMAIVLAEHSNEPIDVLKVVKMVLIHDIVEIDAGDVFIYDTVKNHSNTD CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH EERLAANRIFGLLPKNQAEEFISIWEEFEAGETNEAKFARSMDRLEPLLQNTSNNGGTWK HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH EFGVKYDKVYEKKSIIKEGSKSIWNYAEGLINESVEKGILEK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MCLNLSNYALSFNFAYDECHFKIKKKMNTKDLLDQIAFIKEIDKVKYIQRKTKLFNSDRC CCCCCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ENDAEHSWHLALMAIVLAEHSNEPIDVLKVVKMVLIHDIVEIDAGDVFIYDTVKNHSNTD CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCH EERLAANRIFGLLPKNQAEEFISIWEEFEAGETNEAKFARSMDRLEPLLQNTSNNGGTWK HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHH EFGVKYDKVYEKKSIIKEGSKSIWNYAEGLINESVEKGILEK HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA