| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302576
Identifier: 146302576
GI number: 146302576
Start: 5868879
End: 5870123
Strand: Direct
Name: 146302576
Synonym: Fjoh_4849
Alternate gene names: NA
Gene position: 5868879-5870123 (Clockwise)
Preceding gene: 146302575
Following gene: 146302577
Centisome position: 96.26
GC content: 32.29
Gene sequence:
>1245_bases ATGACACGAGAATATTACAAACTACCTGAGTCTAGTGCAATAATGCGATTTCTGTGGAAATGCGCTGGAGGAGATCGTTA TTTACTTGAAAGAGCTACCTATTCTGACCAAATAAAATACATGTGTTTGGGAGGAATTGTTTTTGCAACTGGAGCTTTGG CTGGGATTGCAGGCGGGTATGCCTTTTATACCATATTTGAGCCAAGAGGATCTGCAATTGATAATCCTATTGATTTACAA ACTATTTGTATAGCATTTTTCTTTGGAATTGTTTGGGGATTAATGATATTCAACATTGATCGTTTCATTGTGACAAGTAC TGGTAAAGGAGATGGAACTGAAGCTATTACTATAGGCGAACTAAAAAGTGCACTTCCTAGAATTTTAATGGGAATGATCA TCGCTATGACAATTTCAAAACCTGTTGAAATTAGAATGTTTAAAACCGAAATTGACATAAAACTACGAGAAAAACAACTT GAACAACAAGCTGAATATCAAAAAAAAGTAGATAAAACTTATTCAGATCGAGAAAAATTATTAACTGCAGAATTTGGAAC TATTGCGAAAGAAAGGACTGCATTAAATGAACGAATTAAAGCTGCAGAACAAGCTTATACTGATAATTTAATGGGTAAAG GAGAAAAAGTACCCGCTGGAAATGGCCCTTTATCACGAGCATTAAAATCGCAATTAGATGATCTAACCAATCAATTAGCA ACTTTTGACAAACAAAATGGAAAAGATTTAGCTGAACTAAATAAAAGAAAAGATATTCTAAGAATAGAAAAAGACAAAGC CAGAGCAGATAATACAAAAATAGCGAATGGTCTCGATGGTTTACTTGAACGCATAAAAATTGCTCATGAAGTAGCCGGTT TTTGGATTTCTCTTTTTATCACTTTACTATTCATGGCAATAGAACTTACTCCTATTTTTTTCAAGCTAATGTTAACCAAA ACGACTTATGACTATTTGGCTGAAAACCGTGATGAATTAATTAAGGCAGAATACGGAATTGAGGTAAAATATGATTACTA CAAAGATAAACAGGGAGTAGAAAAACATTTAGTGATTAATCATGAGGCTGAAAAGTTAATTTTTGAAAAAATGAAAGTTA CAGAAATTCAAAAGGAGCTTACAAAATATGCTGTTGAAAAGTATAAAGAAAGAGAAATGAGTAAAATAGATAACAATCTG GATGCTTATATAAATTCAATCGAAAAAAATGAACAAAGCAGTTAA
Upstream 100 bases:
>100_bases AGATTTCTATTTCAAAACCGGAGATAAAAACATCAAAAGTTAGTATAAAAAATCAAGCAGTCAATTTCAATCATAATACT TATAACCAAAACGAATTTAT
Downstream 100 bases:
>100_bases CGAAATTCGGCTTTTTTTATTTACATGTTCTGGAGAAGATAATTACATTTTAAAAAGATGTAATAAACGAATCCAGACAA GATTTGCATTGCTTGGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTREYYKLPESSAIMRFLWKCAGGDRYLLERATYSDQIKYMCLGGIVFATGALAGIAGGYAFYTIFEPRGSAIDNPIDLQ TICIAFFFGIVWGLMIFNIDRFIVTSTGKGDGTEAITIGELKSALPRILMGMIIAMTISKPVEIRMFKTEIDIKLREKQL EQQAEYQKKVDKTYSDREKLLTAEFGTIAKERTALNERIKAAEQAYTDNLMGKGEKVPAGNGPLSRALKSQLDDLTNQLA TFDKQNGKDLAELNKRKDILRIEKDKARADNTKIANGLDGLLERIKIAHEVAGFWISLFITLLFMAIELTPIFFKLMLTK TTYDYLAENRDELIKAEYGIEVKYDYYKDKQGVEKHLVINHEAEKLIFEKMKVTEIQKELTKYAVEKYKEREMSKIDNNL DAYINSIEKNEQSS
Sequences:
>Translated_414_residues MTREYYKLPESSAIMRFLWKCAGGDRYLLERATYSDQIKYMCLGGIVFATGALAGIAGGYAFYTIFEPRGSAIDNPIDLQ TICIAFFFGIVWGLMIFNIDRFIVTSTGKGDGTEAITIGELKSALPRILMGMIIAMTISKPVEIRMFKTEIDIKLREKQL EQQAEYQKKVDKTYSDREKLLTAEFGTIAKERTALNERIKAAEQAYTDNLMGKGEKVPAGNGPLSRALKSQLDDLTNQLA TFDKQNGKDLAELNKRKDILRIEKDKARADNTKIANGLDGLLERIKIAHEVAGFWISLFITLLFMAIELTPIFFKLMLTK TTYDYLAENRDELIKAEYGIEVKYDYYKDKQGVEKHLVINHEAEKLIFEKMKVTEIQKELTKYAVEKYKEREMSKIDNNL DAYINSIEKNEQSS >Mature_413_residues TREYYKLPESSAIMRFLWKCAGGDRYLLERATYSDQIKYMCLGGIVFATGALAGIAGGYAFYTIFEPRGSAIDNPIDLQT ICIAFFFGIVWGLMIFNIDRFIVTSTGKGDGTEAITIGELKSALPRILMGMIIAMTISKPVEIRMFKTEIDIKLREKQLE QQAEYQKKVDKTYSDREKLLTAEFGTIAKERTALNERIKAAEQAYTDNLMGKGEKVPAGNGPLSRALKSQLDDLTNQLAT FDKQNGKDLAELNKRKDILRIEKDKARADNTKIANGLDGLLERIKIAHEVAGFWISLFITLLFMAIELTPIFFKLMLTKT TYDYLAENRDELIKAEYGIEVKYDYYKDKQGVEKHLVINHEAEKLIFEKMKVTEIQKELTKYAVEKYKEREMSKIDNNLD AYINSIEKNEQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47230; Mature: 47099
Theoretical pI: Translated: 7.42; Mature: 7.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREYYKLPESSAIMRFLWKCAGGDRYLLERATYSDQIKYMCLGGIVFATGALAGIAGGY CCCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCE AFYTIFEPRGSAIDNPIDLQTICIAFFFGIVWGLMIFNIDRFIVTSTGKGDGTEAITIGE EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEHHH LKSALPRILMGMIIAMTISKPVEIRMFKTEIDIKLREKQLEQQAEYQKKVDKTYSDREKL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAEFGTIAKERTALNERIKAAEQAYTDNLMGKGEKVPAGNGPLSRALKSQLDDLTNQLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TFDKQNGKDLAELNKRKDILRIEKDKARADNTKIANGLDGLLERIKIAHEVAGFWISLFI HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLFMAIELTPIFFKLMLTKTTYDYLAENRDELIKAEYGIEVKYDYYKDKQGVEKHLVIN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCHHEEEC HEAEKLIFEKMKVTEIQKELTKYAVEKYKEREMSKIDNNLDAYINSIEKNEQSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TREYYKLPESSAIMRFLWKCAGGDRYLLERATYSDQIKYMCLGGIVFATGALAGIAGGY CCCHHCCCCHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCE AFYTIFEPRGSAIDNPIDLQTICIAFFFGIVWGLMIFNIDRFIVTSTGKGDGTEAITIGE EEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEHHH LKSALPRILMGMIIAMTISKPVEIRMFKTEIDIKLREKQLEQQAEYQKKVDKTYSDREKL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTAEFGTIAKERTALNERIKAAEQAYTDNLMGKGEKVPAGNGPLSRALKSQLDDLTNQLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH TFDKQNGKDLAELNKRKDILRIEKDKARADNTKIANGLDGLLERIKIAHEVAGFWISLFI HHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLLFMAIELTPIFFKLMLTKTTYDYLAENRDELIKAEYGIEVKYDYYKDKQGVEKHLVIN HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEECCCCCCCCCHHEEEC HEAEKLIFEKMKVTEIQKELTKYAVEKYKEREMSKIDNNLDAYINSIEKNEQSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA