Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146302577

Identifier: 146302577

GI number: 146302577

Start: 5870107

End: 5871651

Strand: Direct

Name: 146302577

Synonym: Fjoh_4850

Alternate gene names: NA

Gene position: 5870107-5871651 (Clockwise)

Preceding gene: 146302576

Following gene: 146302578

Centisome position: 96.28

GC content: 25.18

Gene sequence:

>1545_bases
ATGAACAAAGCAGTTAACGAAATTCGGCTTTTTTTATTTACATGTTCTGGAGAAGATAATTACATTTTAAAAAGATGTAA
TAAACGAATCCAGACAAGATTTGCATTGCTTGGCTTTTTTGTTCTTCTAATATTTATTGGATGTTTTTTCAGTGCAACTT
TTTTTATTATTTCATTATTTAATGGAGCTCATTTTTTTGGCATCACAATTGGTTTTATTTGGGGAGCAGTAGTTGTAAAT
ATGTATTTATTATTACTCCATACTATCTCACCAGCAATAATTCCTTTATCATCAAAAAGAAAAAAGAGCAAAAACTCCAA
TAACAATGTCGAAATAAATACGAACCAAAACAGTTTTGTAAATCTTTCCATGATTTTGAGAATTGGCTTCATGACTTTAT
TAGCGATCATTATTGCTCAACCTTTAAGCGTATATCTGCTCTCACACTCCGTACAAAATGATATTGAAAAACATAAAATC
TCGGAAAGAATTAAACTATACACATTAACAAACAGTCAATTAATTAAAGAAGAACTTATTAATCGAAAAGAATTTAATAA
CAAGGTTATTAGTCAGTTAAATTATGCAGAAACAAAATCCCTTCAAAATCAAATTGGCATAATAAATTCAAAAATTAAAA
CAGATAGTTTATTCGTTATCAACACAATAAAGAAATTAACTCAATTTAATAAAATTGACAGAAAATTTAGTTTAAGTAAT
AAAGAGGAATTACAGAAAATAAAAATATTAAATGACCTCGAAAATTTATTAGCCAATGAATTAACATCAGATAAGAATTT
TATAATAGATATTAATTCTATAGCTATAGGTGGTTCACTAAAATCAGATTTTGATAATTTCAAAAACAATTTAAATACTT
TAGTCACAAATAAGATTGATAACTATAATTCTTTAAATAATCTTTTAAATAAAAGCAATTTTTATGTAAAAACAATTCAA
TTGTTATTTACTGGAAATCCAATTTCATGGATTATTACAGTAATTGTTTGTTTAGTATTTGTTTTCCCAATTTACTCTAA
ATACAAAGCACGTAATTTATGTTCGAGAATATTTAAAACCAATGAAAGAAATGAACGTGATATTGTTAAATTAAGAGAAG
AACTTATAAAGACAACAGATTTTAATTGGCTAGAAAGTAAAATAAAATCAGTTAATATAAACAGTATTAATACGTCAGAT
TATTATTTCCAACGAATGTTAATCGAGCATCGAATTATTCTAGAAGAGTACGAAAATTCAAAAAAGGTATTTACAAAAAT
CCTCTCTCATAATATATCATCTTTCAACAAAGAATCTTTAAAAAGACTAAGGCCATTATTAGACAAATTAAAGCATTTTA
ATTTTCAAAAGTATAGTGTAATCGAAAGATCAATTAATAAAGAATATACTGATGAAGAAATGCGTAAATATGAATATTGG
TTAGATTCTCCTTTTAGAACTAAAATGAGATTAATTACAAAGATTTCAAATAATGAAAAAGGACTACTAGACTTCCTCTA
CGATCAAAAACCTGAAAACGATTAG

Upstream 100 bases:

>100_bases
CAAAAGGAGCTTACAAAATATGCTGTTGAAAAGTATAAAGAAAGAGAAATGAGTAAAATAGATAACAATCTGGATGCTTA
TATAAATTCAATCGAAAAAA

Downstream 100 bases:

>100_bases
AAAATGCTAGATAAAATAGTAAATATCATCAATGAAGAAACTTTTATAGGAGAAGATAATCTAGCCTATAAAAAAATCAC
ATATGAAATTCTAATACCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MNKAVNEIRLFLFTCSGEDNYILKRCNKRIQTRFALLGFFVLLIFIGCFFSATFFIISLFNGAHFFGITIGFIWGAVVVN
MYLLLLHTISPAIIPLSSKRKKSKNSNNNVEINTNQNSFVNLSMILRIGFMTLLAIIIAQPLSVYLLSHSVQNDIEKHKI
SERIKLYTLTNSQLIKEELINRKEFNNKVISQLNYAETKSLQNQIGIINSKIKTDSLFVINTIKKLTQFNKIDRKFSLSN
KEELQKIKILNDLENLLANELTSDKNFIIDINSIAIGGSLKSDFDNFKNNLNTLVTNKIDNYNSLNNLLNKSNFYVKTIQ
LLFTGNPISWIITVIVCLVFVFPIYSKYKARNLCSRIFKTNERNERDIVKLREELIKTTDFNWLESKIKSVNINSINTSD
YYFQRMLIEHRIILEEYENSKKVFTKILSHNISSFNKESLKRLRPLLDKLKHFNFQKYSVIERSINKEYTDEEMRKYEYW
LDSPFRTKMRLITKISNNEKGLLDFLYDQKPEND

Sequences:

>Translated_514_residues
MNKAVNEIRLFLFTCSGEDNYILKRCNKRIQTRFALLGFFVLLIFIGCFFSATFFIISLFNGAHFFGITIGFIWGAVVVN
MYLLLLHTISPAIIPLSSKRKKSKNSNNNVEINTNQNSFVNLSMILRIGFMTLLAIIIAQPLSVYLLSHSVQNDIEKHKI
SERIKLYTLTNSQLIKEELINRKEFNNKVISQLNYAETKSLQNQIGIINSKIKTDSLFVINTIKKLTQFNKIDRKFSLSN
KEELQKIKILNDLENLLANELTSDKNFIIDINSIAIGGSLKSDFDNFKNNLNTLVTNKIDNYNSLNNLLNKSNFYVKTIQ
LLFTGNPISWIITVIVCLVFVFPIYSKYKARNLCSRIFKTNERNERDIVKLREELIKTTDFNWLESKIKSVNINSINTSD
YYFQRMLIEHRIILEEYENSKKVFTKILSHNISSFNKESLKRLRPLLDKLKHFNFQKYSVIERSINKEYTDEEMRKYEYW
LDSPFRTKMRLITKISNNEKGLLDFLYDQKPEND
>Mature_514_residues
MNKAVNEIRLFLFTCSGEDNYILKRCNKRIQTRFALLGFFVLLIFIGCFFSATFFIISLFNGAHFFGITIGFIWGAVVVN
MYLLLLHTISPAIIPLSSKRKKSKNSNNNVEINTNQNSFVNLSMILRIGFMTLLAIIIAQPLSVYLLSHSVQNDIEKHKI
SERIKLYTLTNSQLIKEELINRKEFNNKVISQLNYAETKSLQNQIGIINSKIKTDSLFVINTIKKLTQFNKIDRKFSLSN
KEELQKIKILNDLENLLANELTSDKNFIIDINSIAIGGSLKSDFDNFKNNLNTLVTNKIDNYNSLNNLLNKSNFYVKTIQ
LLFTGNPISWIITVIVCLVFVFPIYSKYKARNLCSRIFKTNERNERDIVKLREELIKTTDFNWLESKIKSVNINSINTSD
YYFQRMLIEHRIILEEYENSKKVFTKILSHNISSFNKESLKRLRPLLDKLKHFNFQKYSVIERSINKEYTDEEMRKYEYW
LDSPFRTKMRLITKISNNEKGLLDFLYDQKPEND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60166; Mature: 60166

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKAVNEIRLFLFTCSGEDNYILKRCNKRIQTRFALLGFFVLLIFIGCFFSATFFIISLF
CCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGAHFFGITIGFIWGAVVVNMYLLLLHTISPAIIPLSSKRKKSKNSNNNVEINTNQNSFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCEEEECCCCCHH
NLSMILRIGFMTLLAIIIAQPLSVYLLSHSVQNDIEKHKISERIKLYTLTNSQLIKEELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHH
NRKEFNNKVISQLNYAETKSLQNQIGIINSKIKTDSLFVINTIKKLTQFNKIDRKFSLSN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
KEELQKIKILNDLENLLANELTSDKNFIIDINSIAIGGSLKSDFDNFKNNLNTLVTNKID
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCC
NYNSLNNLLNKSNFYVKTIQLLFTGNPISWIITVIVCLVFVFPIYSKYKARNLCSRIFKT
CHHHHHHHHCCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NERNERDIVKLREELIKTTDFNWLESKIKSVNINSINTSDYYFQRMLIEHRIILEEYENS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
KKVFTKILSHNISSFNKESLKRLRPLLDKLKHFNFQKYSVIERSINKEYTDEEMRKYEYW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH
LDSPFRTKMRLITKISNNEKGLLDFLYDQKPEND
CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKAVNEIRLFLFTCSGEDNYILKRCNKRIQTRFALLGFFVLLIFIGCFFSATFFIISLF
CCCCHHEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NGAHFFGITIGFIWGAVVVNMYLLLLHTISPAIIPLSSKRKKSKNSNNNVEINTNQNSFV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHCCCCCCCEEEECCCCCHH
NLSMILRIGFMTLLAIIIAQPLSVYLLSHSVQNDIEKHKISERIKLYTLTNSQLIKEELI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHH
NRKEFNNKVISQLNYAETKSLQNQIGIINSKIKTDSLFVINTIKKLTQFNKIDRKFSLSN
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
KEELQKIKILNDLENLLANELTSDKNFIIDINSIAIGGSLKSDFDNFKNNLNTLVTNKID
HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCC
NYNSLNNLLNKSNFYVKTIQLLFTGNPISWIITVIVCLVFVFPIYSKYKARNLCSRIFKT
CHHHHHHHHCCCCHHEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NERNERDIVKLREELIKTTDFNWLESKIKSVNINSINTSDYYFQRMLIEHRIILEEYENS
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCH
KKVFTKILSHNISSFNKESLKRLRPLLDKLKHFNFQKYSVIERSINKEYTDEEMRKYEYW
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHH
LDSPFRTKMRLITKISNNEKGLLDFLYDQKPEND
CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA