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The map label for this gene is ureF [H]

Identifier: 146302560

GI number: 146302560

Start: 5850918

End: 5851604

Strand: Reverse

Name: ureF [H]

Synonym: Fjoh_4833

Alternate gene names: 146302560

Gene position: 5851604-5850918 (Counterclockwise)

Preceding gene: 146302561

Following gene: 146302559

Centisome position: 95.98

GC content: 36.39

Gene sequence:

>687_bases
ATGAAAAATTTTATAGGCAGCTTATTACACCTAAGTGATCCAACATTGCCAATTGGAGGTTACACACACTCAAACGGACT
GGAAACTTATGTACAGCAGGGATTAGTAAAAGATAGGGAATCTGCTATGTTATTTGTTCACAATATGCTTACAAACAATT
TATTATACAATGATGCAGCATTTGTAAAACTCGCTTATGAAGCTGCACAGTCTAAAAATACCAGCGCATTGTTTTTACTT
GATGATGAGTGCGCAGCATTAAAAACGGCCCGTGAAATTAGGCAGGCAAGCCAAAAACTAGGAGTAAGACTTATCAAAAT
CTTTAAACGCCAGGTTGCAGATGAGATAATTAACGAATACGAAAAAGCAATTTTTGAGAAAAAATCCGAAGGACATTATT
GTATCGTTTTTGGAATTTATGCAAGCTTATTAAATATTCCGTTGTATGAAGCTCTTTTTGCATTCTTATATAATGCAGCT
GTTGGAATGGTAACCAATGCTGTAAAGCTTGTTCCGCTGGGACAGCTGGATGGACAAGATATACTGCATGATATGCAGGA
AGTAATTGAAACTGTAGCCGGAAAGACCATTGAGCTTGATCGAAATCATGTGGGCTTATGCAATATTGGTCTGGATGTAA
GATGTATGCAGCATGAGCAATTGTATTCAAGATTATATATGTCTTAA

Upstream 100 bases:

>100_bases
CTACTGTGCAGCCGCATGGACATTCAGAAAGTAGTTCGCTGTTTTTTAAAATTATGAATATCGCTAAGTAAAAAGGGATT
TATTTTTAATAAAATATATA

Downstream 100 bases:

>100_bases
AAAAAACAATAAAAATAAAGTAGTAACCAAGAGCTAAAAACTCAGTGTTACAATTAAAAAATTAGAAAAAATGAAAGAAA
GAAATTATATCAAAATTGGA

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MKNFIGSLLHLSDPTLPIGGYTHSNGLETYVQQGLVKDRESAMLFVHNMLTNNLLYNDAAFVKLAYEAAQSKNTSALFLL
DDECAALKTAREIRQASQKLGVRLIKIFKRQVADEIINEYEKAIFEKKSEGHYCIVFGIYASLLNIPLYEALFAFLYNAA
VGMVTNAVKLVPLGQLDGQDILHDMQEVIETVAGKTIELDRNHVGLCNIGLDVRCMQHEQLYSRLYMS

Sequences:

>Translated_228_residues
MKNFIGSLLHLSDPTLPIGGYTHSNGLETYVQQGLVKDRESAMLFVHNMLTNNLLYNDAAFVKLAYEAAQSKNTSALFLL
DDECAALKTAREIRQASQKLGVRLIKIFKRQVADEIINEYEKAIFEKKSEGHYCIVFGIYASLLNIPLYEALFAFLYNAA
VGMVTNAVKLVPLGQLDGQDILHDMQEVIETVAGKTIELDRNHVGLCNIGLDVRCMQHEQLYSRLYMS
>Mature_228_residues
MKNFIGSLLHLSDPTLPIGGYTHSNGLETYVQQGLVKDRESAMLFVHNMLTNNLLYNDAAFVKLAYEAAQSKNTSALFLL
DDECAALKTAREIRQASQKLGVRLIKIFKRQVADEIINEYEKAIFEKKSEGHYCIVFGIYASLLNIPLYEALFAFLYNAA
VGMVTNAVKLVPLGQLDGQDILHDMQEVIETVAGKTIELDRNHVGLCNIGLDVRCMQHEQLYSRLYMS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25609; Mature: 25609

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFIGSLLHLSDPTLPIGGYTHSNGLETYVQQGLVKDRESAMLFVHNMLTNNLLYNDAA
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH
FVKLAYEAAQSKNTSALFLLDDECAALKTAREIRQASQKLGVRLIKIFKRQVADEIINEY
HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKAIFEKKSEGHYCIVFGIYASLLNIPLYEALFAFLYNAAVGMVTNAVKLVPLGQLDGQD
HHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
ILHDMQEVIETVAGKTIELDRNHVGLCNIGLDVRCMQHEQLYSRLYMS
HHHHHHHHHHHHCCCEEEECCCCEEEEECCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MKNFIGSLLHLSDPTLPIGGYTHSNGLETYVQQGLVKDRESAMLFVHNMLTNNLLYNDAA
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHH
FVKLAYEAAQSKNTSALFLLDDECAALKTAREIRQASQKLGVRLIKIFKRQVADEIINEY
HHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKAIFEKKSEGHYCIVFGIYASLLNIPLYEALFAFLYNAAVGMVTNAVKLVPLGQLDGQD
HHHHHHCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHH
ILHDMQEVIETVAGKTIELDRNHVGLCNIGLDVRCMQHEQLYSRLYMS
HHHHHHHHHHHHCCCEEEECCCCEEEEECCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA