| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is ureE
Identifier: 146302561
GI number: 146302561
Start: 5851634
End: 5852131
Strand: Reverse
Name: ureE
Synonym: Fjoh_4834
Alternate gene names: 146302561
Gene position: 5852131-5851634 (Counterclockwise)
Preceding gene: 146302562
Following gene: 146302560
Centisome position: 95.99
GC content: 33.73
Gene sequence:
>498_bases ATGATTATAAATGAAATTGAAGGAAGCCTTAGGGAATTTGATATCACAAACCGTGTTGTAGATTATCTGGAAATAGAATG GTTTGAATCTACTAAACGAATTCAGCGGAAAAAATCTAAAAACGGACAAGAAGTTGCCATTAAATTTTTGAAAGAAGGAC AGCGGTTAAAACATGAGGATGTAATATATGCAGATGATCAAAAAATAATAGTAGTTGATATTATTCCCTGCGATGCAATT GTGGTAAAACCAAAATCATTGCTTGAAATGGGCAACGTATGCTACGAGATTGGAAACAAGCATCTTCCAATGTTTATACA AAATGATGAGGTATTGCTTCCTTTTGAAGAGCCTATTTTTAAATGGCTTTCGGCGAGCGGTTATCATACAGAAAAAGTCT TTACAAGATTAACTAACATAGTAAACTCTACTGTGCAGCCGCATGGACATTCAGAAAGTAGTTCGCTGTTTTTTAAAATT ATGAATATCGCTAAGTAA
Upstream 100 bases:
>100_bases CTGGTTAATCCGGCAGCAGTTTCTATCTAATTGAACCTTTAGAATGATATGAAAAAGAAACAAGGCATGCTTGAAAAATG TATGATTTAAAATAGAAGAT
Downstream 100 bases:
>100_bases AAAGGGATTTATTTTTAATAAAATATATAATGAAAAATTTTATAGGCAGCTTATTACACCTAAGTGATCCAACATTGCCA ATTGGAGGTTACACACACTC
Product: urease accessory protein UreE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MIINEIEGSLREFDITNRVVDYLEIEWFESTKRIQRKKSKNGQEVAIKFLKEGQRLKHEDVIYADDQKIIVVDIIPCDAI VVKPKSLLEMGNVCYEIGNKHLPMFIQNDEVLLPFEEPIFKWLSASGYHTEKVFTRLTNIVNSTVQPHGHSESSSLFFKI MNIAK
Sequences:
>Translated_165_residues MIINEIEGSLREFDITNRVVDYLEIEWFESTKRIQRKKSKNGQEVAIKFLKEGQRLKHEDVIYADDQKIIVVDIIPCDAI VVKPKSLLEMGNVCYEIGNKHLPMFIQNDEVLLPFEEPIFKWLSASGYHTEKVFTRLTNIVNSTVQPHGHSESSSLFFKI MNIAK >Mature_165_residues MIINEIEGSLREFDITNRVVDYLEIEWFESTKRIQRKKSKNGQEVAIKFLKEGQRLKHEDVIYADDQKIIVVDIIPCDAI VVKPKSLLEMGNVCYEIGNKHLPMFIQNDEVLLPFEEPIFKWLSASGYHTEKVFTRLTNIVNSTVQPHGHSESSSLFFKI MNIAK
Specific function: Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
COG id: COG2371
COG function: function code O; Urease accessory protein UreE
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ureE family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UREE_FLAJ1 (A5FAD0)
Other databases:
- EMBL: CP000685 - RefSeq: YP_001197152.1 - STRING: A5FAD0 - GeneID: 5089462 - GenomeReviews: CP000685_GR - KEGG: fjo:Fjoh_4834 - eggNOG: COG2371 - HOGENOM: HBG296675 - OMA: ICYEIGN - ProtClustDB: PRK13261 - BioCyc: FJOH376686:FJOH_4834-MONOMER - GO: GO:0005737 - HAMAP: MF_00822 - InterPro: IPR012406 - InterPro: IPR007864 - InterPro: IPR004029 - Gene3D: G3DSA:3.30.70.790 - PIRSF: PIRSF036402
Pfam domain/function: PF05194 UreE_C; PF02814 UreE_N; SSF69737 UreE_C; SSF69287 UreE_N
EC number: NA
Molecular weight: Translated: 19125; Mature: 19125
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIINEIEGSLREFDITNRVVDYLEIEWFESTKRIQRKKSKNGQEVAIKFLKEGQRLKHED CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC VIYADDQKIIVVDIIPCDAIVVKPKSLLEMGNVCYEIGNKHLPMFIQNDEVLLPFEEPIF EEEECCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCEEECCHHHHH KWLSASGYHTEKVFTRLTNIVNSTVQPHGHSESSSLFFKIMNIAK HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure MIINEIEGSLREFDITNRVVDYLEIEWFESTKRIQRKKSKNGQEVAIKFLKEGQRLKHED CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCC VIYADDQKIIVVDIIPCDAIVVKPKSLLEMGNVCYEIGNKHLPMFIQNDEVLLPFEEPIF EEEECCCEEEEEEEECCCEEEECCHHHHHHHHHHHHHCCCCCCEEECCCCEEECCHHHHH KWLSASGYHTEKVFTRLTNIVNSTVQPHGHSESSSLFFKIMNIAK HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA