Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is yfeW [H]

Identifier: 146302534

GI number: 146302534

Start: 5810663

End: 5811967

Strand: Reverse

Name: yfeW [H]

Synonym: Fjoh_4807

Alternate gene names: 146302534

Gene position: 5811967-5810663 (Counterclockwise)

Preceding gene: 146302535

Following gene: 146302533

Centisome position: 95.33

GC content: 33.79

Gene sequence:

>1305_bases
ATGAAAAAGATAACGGCAGGAATCATATTAATTTCCATGACCTTTTTAGGAATAAATGCTTATTCCCAGAAAAAATCAAA
GAAATCTTTTGATGTAAAACGAAATGAAGTTTACATCGATTCGATGATGACAAATGCACTCGAAAAAGGATTTTTTCCCG
GAGCACAGATTATAGTGGGAAATAAAGACGCTGTTTTAATTTCGAAAAATTATGGTTTTCAGGATTATTCGAAAAAACAG
CCCGTAAAATCAGACGACGTTTATGATCTGGCTTCGATGTCGAAAGTTTTGGGAGCGACACTTGTGACCATGCGCTTAGT
TGGAGAAGATAAAATAAAACTTACCGACAAAGTTGGAGATTTGGTTGAAGTTTATAAAAACACGCCAATTGCTGATTTAA
CGTTTTTTGAATTATTAACGCATACTTCGGGATTAAAAGCGAGTATTACGTTTTACCAAAGTCTGCTTTCAACGCCAGAT
GGTTTGCCTTTGTTAAGCAAAGAAAAATCAGATGTTTATCCTGATTTGTTTGATACGATGTATGTGAACAAGAATATTGT
GTATGATGCCAATTATCTTTCGTTTACTCCCAAAGAAAATTGGGTTCAGATTTATAAAAATATGTGGTTAAATCCGGAGT
TTTATAAAACGGTTTATGAGCAAATTTCAACTGCAAATACCAATACAAGAGGGAAATATGTTTACAGCGACCTGAATTTG
CTTTTGGTAAAACAAATGATTGAAGCCAAAACAGGTTTGAAATTAGATGAATTAACGAAAGAAATTTATACGGAATTAGG
AATCTCAAAAATTGGATATAATCCGTTAAAATGGACTTCTTTAGAAAATGTAACGCCGACAGAATTGGATAATTTCTTTA
GAAAAGATACAATAAGAGGTTACGTTCATGATGAAGCTGCGGCGATTTTTGGCGGTGTTTCTGGAAATGCCGGATTGTTT
GCTAATGCACAATCAATCTCAGTTATCTGTCAGATGCTGTTGAATGACGGAAAATATCAAGGAAAAGAAATTTTAAAAGC
AACAGTTGTAAAAGAATTTACAAGTTCGCCTCTCACCAAAGAAGGGATTTACCGCGGACTTGGTTTTGATAAACGAAAAC
CTGATGAGTTTTTTAAAGCTAATGATTTTGGGCACACAGGTTTTACAGGAACTTTTTTCTTTATGAATCCAGATACGAAC
AGATTTCTAATTATTCTGACCAATCGCGTAAACCCAACGAGAACAAACAGATTGATGTATAAAGATGATTTTAGTGCTAA
AATTTGGAGGCAGATTAATAATTAA

Upstream 100 bases:

>100_bases
TTATCCAAAACAGCCTGTAAAAGCAGTAAAAATTGTCATTACAGGAACCAACAACGAACCTCTTATGGCAGGACAGGACA
TAAGAATTAATCCGTAGAAT

Downstream 100 bases:

>100_bases
TTTTTTTAGCCACAGATTAAACAGATTAGAAGGATTTTTTTCGCCAGAACCCGAGCGATAGCAAACAGTCGAAGCAATTC
AAGAATTTCCACGAATTAAA

Product: beta-lactamase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKKITAGIILISMTFLGINAYSQKKSKKSFDVKRNEVYIDSMMTNALEKGFFPGAQIIVGNKDAVLISKNYGFQDYSKKQ
PVKSDDVYDLASMSKVLGATLVTMRLVGEDKIKLTDKVGDLVEVYKNTPIADLTFFELLTHTSGLKASITFYQSLLSTPD
GLPLLSKEKSDVYPDLFDTMYVNKNIVYDANYLSFTPKENWVQIYKNMWLNPEFYKTVYEQISTANTNTRGKYVYSDLNL
LLVKQMIEAKTGLKLDELTKEIYTELGISKIGYNPLKWTSLENVTPTELDNFFRKDTIRGYVHDEAAAIFGGVSGNAGLF
ANAQSISVICQMLLNDGKYQGKEILKATVVKEFTSSPLTKEGIYRGLGFDKRKPDEFFKANDFGHTGFTGTFFFMNPDTN
RFLIILTNRVNPTRTNRLMYKDDFSAKIWRQINN

Sequences:

>Translated_434_residues
MKKITAGIILISMTFLGINAYSQKKSKKSFDVKRNEVYIDSMMTNALEKGFFPGAQIIVGNKDAVLISKNYGFQDYSKKQ
PVKSDDVYDLASMSKVLGATLVTMRLVGEDKIKLTDKVGDLVEVYKNTPIADLTFFELLTHTSGLKASITFYQSLLSTPD
GLPLLSKEKSDVYPDLFDTMYVNKNIVYDANYLSFTPKENWVQIYKNMWLNPEFYKTVYEQISTANTNTRGKYVYSDLNL
LLVKQMIEAKTGLKLDELTKEIYTELGISKIGYNPLKWTSLENVTPTELDNFFRKDTIRGYVHDEAAAIFGGVSGNAGLF
ANAQSISVICQMLLNDGKYQGKEILKATVVKEFTSSPLTKEGIYRGLGFDKRKPDEFFKANDFGHTGFTGTFFFMNPDTN
RFLIILTNRVNPTRTNRLMYKDDFSAKIWRQINN
>Mature_434_residues
MKKITAGIILISMTFLGINAYSQKKSKKSFDVKRNEVYIDSMMTNALEKGFFPGAQIIVGNKDAVLISKNYGFQDYSKKQ
PVKSDDVYDLASMSKVLGATLVTMRLVGEDKIKLTDKVGDLVEVYKNTPIADLTFFELLTHTSGLKASITFYQSLLSTPD
GLPLLSKEKSDVYPDLFDTMYVNKNIVYDANYLSFTPKENWVQIYKNMWLNPEFYKTVYEQISTANTNTRGKYVYSDLNL
LLVKQMIEAKTGLKLDELTKEIYTELGISKIGYNPLKWTSLENVTPTELDNFFRKDTIRGYVHDEAAAIFGGVSGNAGLF
ANAQSISVICQMLLNDGKYQGKEILKATVVKEFTSSPLTKEGIYRGLGFDKRKPDEFFKANDFGHTGFTGTFFFMNPDTN
RFLIILTNRVNPTRTNRLMYKDDFSAKIWRQINN

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=417, Percent_Identity=27.3381294964029, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 49257; Mature: 49257

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKITAGIILISMTFLGINAYSQKKSKKSFDVKRNEVYIDSMMTNALEKGFFPGAQIIVG
CCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEC
NKDAVLISKNYGFQDYSKKQPVKSDDVYDLASMSKVLGATLVTMRLVGEDKIKLTDKVGD
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHH
LVEVYKNTPIADLTFFELLTHTSGLKASITFYQSLLSTPDGLPLLSKEKSDVYPDLFDTM
HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
YVNKNIVYDANYLSFTPKENWVQIYKNMWLNPEFYKTVYEQISTANTNTRGKYVYSDLNL
EECCCEEEECCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECHHHH
LLVKQMIEAKTGLKLDELTKEIYTELGISKIGYNPLKWTSLENVTPTELDNFFRKDTIRG
HHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCE
YVHDEAAAIFGGVSGNAGLFANAQSISVICQMLLNDGKYQGKEILKATVVKEFTSSPLTK
EECCCHHHHCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH
EGIYRGLGFDKRKPDEFFKANDFGHTGFTGTFFFMNPDTNRFLIILTNRVNPTRTNRLMY
HHHHHCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEE
KDDFSAKIWRQINN
ECCCHHHHHHHHCC
>Mature Secondary Structure
MKKITAGIILISMTFLGINAYSQKKSKKSFDVKRNEVYIDSMMTNALEKGFFPGAQIIVG
CCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHCCCCCCEEEEC
NKDAVLISKNYGFQDYSKKQPVKSDDVYDLASMSKVLGATLVTMRLVGEDKIKLTDKVGD
CCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCEEEHHHHHH
LVEVYKNTPIADLTFFELLTHTSGLKASITFYQSLLSTPDGLPLLSKEKSDVYPDLFDTM
HHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHH
YVNKNIVYDANYLSFTPKENWVQIYKNMWLNPEFYKTVYEQISTANTNTRGKYVYSDLNL
EECCCEEEECCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEECHHHH
LLVKQMIEAKTGLKLDELTKEIYTELGISKIGYNPLKWTSLENVTPTELDNFFRKDTIRG
HHHHHHHHHHHCCCHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCE
YVHDEAAAIFGGVSGNAGLFANAQSISVICQMLLNDGKYQGKEILKATVVKEFTSSPLTK
EECCCHHHHCCCCCCCCCEEECHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCH
EGIYRGLGFDKRKPDEFFKANDFGHTGFTGTFFFMNPDTNRFLIILTNRVNPTRTNRLMY
HHHHHCCCCCCCCCHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCCCCCCEEEE
KDDFSAKIWRQINN
ECCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]