| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302516
Identifier: 146302516
GI number: 146302516
Start: 5787834
End: 5789597
Strand: Reverse
Name: 146302516
Synonym: Fjoh_4789
Alternate gene names: NA
Gene position: 5789597-5787834 (Counterclockwise)
Preceding gene: 146302517
Following gene: 146302514
Centisome position: 94.96
GC content: 33.5
Gene sequence:
>1764_bases ATGCTCAGCAACACAAAGTTTATTTTTGCACCCATTTTGTTTCTACTTATTTCGGGTGTTTTTTTTAAAGTAAATGCTCA ATCTATATTAGATAACGAAATATCTGTTCATGCAGATAAGAAACCATTAGGCAGTATTTTGGACTTAATGGAAGAAAAAG GAAATTTTAGATTTGCTTATTACAGCAAATTAGTTGTAAAGGATAGTGTTGTCAGTATTCATGCCGATAAATATACCATA AAAGGAGTTTTAGACCAGCTGTTAAGCAATAAATACGAGTACAAAGAATCGCCGGGGTTTATTATTGTACGTTATGCTCC ATTAGAGCTGGCTCTTGAGCTAGAAAAGAACAATAGTACCAGCGACGGACAGCAGATCGTCAGTGGCTATATTATAGATA CACAGACTAACAATCGTATCGAAAATGTGAGTGTACTGGAGAAGAATGTGCTGCAGTCTACATTAACCAATAAAGATGGA GCTTTTGAACTCCGATTAAAAAATGCTCCCCAGACTATCGAGCTTACGGCTGTCAAAGAAAATTATAAAACCGTAACGAT GCTGTTTCTTTCTGAAATTAAGATTCAGATGGGAAATAGAAAATCAACATCAGATTATATCGATGGGGATTTTTCGGCAA TAGAAAGATCAGGAATTGGCCGTTTTTTTATTTCTTCTAAACAAAAAATACAATCGCTTAATTTGGGAGGATTTATTTCT AAAGTTCCTGTACAGGCTTCTCTAATTCCGAGTATCAGTACACGAGGTATGATGAATACGCAGATTGTCAACAATTTTTC TTTAAATGTGTTAGGCGGTTATAATGCCGGCGTGCGTGGATTAGAAATGGCAGGGCTTTACAATATTAACCGTATGAATG TCGAAGCACTTCAAATGGCAGGAATATTTAATACTGTTGGAGGATCTGTAAACGGACTTCAATTGGCCGGAATCTATAAT AATGTTTTTGGCAATCTTAACGGTTTACAAATAAGCGGAATTCATAATAGTGTAAAAGGTTCACAAATTGGTCTGCAAAT GAGTGGTATCTATAACAATGTTTATAAAGATTCAAAAGGACTTCAAATTGCAGGAATTCATAATACTGTAAATGGCTCTC AAAACGGATTGCAGTTATCCGGTATTTATAATATTGGAAAAGATACCGTACGTGGTGCTCAAATTACCGGACTTTTTAAT TATGCCAAAGAATTACATGGAGTTCAGTTTGGATTGGTAAATATCACAGATTCAGAATCTGGATATAGTTTTGGTTTATT AAACTTTAAAAAAGGCGGTTATAAAAAAATTAGTATTACAAGTAATGAAATTTCAGATATAAATCTCTCTATAAAAACCG GAGATCATAAAATGTATACTATTTTGATGGCGGGAGCAAGCGAACAAAAAGAAGAAGAAAAAATGTTTTCTTTTGGAATT GGAGTAGGAAAAAGCATTCCGTTAGGGAAACGTTTTACTTATAATCCCGAATTTAGTTCACAATATCTTTATTTGGGAAA TTGGGATCGATACAATTCCTTATCTAAATTTGATTCTGCTTTTTCTTTTCAATTATTCAAAGGTTTAGCTATATCTGCAG GACCTTCTTTTAATTTATACTGGTCTGAAAAGAAAGATAAAAATGGCAGTGTAAATACTTCTACATTTGTTCAGGATCGT ACCAAGCGTTATAATATAATTAATAATAACAGCAAAGACATTATTGGATGGATAGGCTGGAGTTTTGGAATAACGTTGTT TTAA
Upstream 100 bases:
>100_bases ATCAATCATTAGATCAGATTTTAGAAGTAATTCAGGAAACATTTACCATTAAAATCGAACGTACAAATAATCAAATACTA TTAGAGTAATTCTTTTTTAT
Downstream 100 bases:
>100_bases TGATATAAAAAAAGCGGAAAAACATATTGTTTTTCCGCTTTTTTGTGGAGTCGCCGGGAATCGAACCCGGGTCCAAACAA GCAACTAAAGAGCTTTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MLSNTKFIFAPILFLLISGVFFKVNAQSILDNEISVHADKKPLGSILDLMEEKGNFRFAYYSKLVVKDSVVSIHADKYTI KGVLDQLLSNKYEYKESPGFIIVRYAPLELALELEKNNSTSDGQQIVSGYIIDTQTNNRIENVSVLEKNVLQSTLTNKDG AFELRLKNAPQTIELTAVKENYKTVTMLFLSEIKIQMGNRKSTSDYIDGDFSAIERSGIGRFFISSKQKIQSLNLGGFIS KVPVQASLIPSISTRGMMNTQIVNNFSLNVLGGYNAGVRGLEMAGLYNINRMNVEALQMAGIFNTVGGSVNGLQLAGIYN NVFGNLNGLQISGIHNSVKGSQIGLQMSGIYNNVYKDSKGLQIAGIHNTVNGSQNGLQLSGIYNIGKDTVRGAQITGLFN YAKELHGVQFGLVNITDSESGYSFGLLNFKKGGYKKISITSNEISDINLSIKTGDHKMYTILMAGASEQKEEEKMFSFGI GVGKSIPLGKRFTYNPEFSSQYLYLGNWDRYNSLSKFDSAFSFQLFKGLAISAGPSFNLYWSEKKDKNGSVNTSTFVQDR TKRYNIINNNSKDIIGWIGWSFGITLF
Sequences:
>Translated_587_residues MLSNTKFIFAPILFLLISGVFFKVNAQSILDNEISVHADKKPLGSILDLMEEKGNFRFAYYSKLVVKDSVVSIHADKYTI KGVLDQLLSNKYEYKESPGFIIVRYAPLELALELEKNNSTSDGQQIVSGYIIDTQTNNRIENVSVLEKNVLQSTLTNKDG AFELRLKNAPQTIELTAVKENYKTVTMLFLSEIKIQMGNRKSTSDYIDGDFSAIERSGIGRFFISSKQKIQSLNLGGFIS KVPVQASLIPSISTRGMMNTQIVNNFSLNVLGGYNAGVRGLEMAGLYNINRMNVEALQMAGIFNTVGGSVNGLQLAGIYN NVFGNLNGLQISGIHNSVKGSQIGLQMSGIYNNVYKDSKGLQIAGIHNTVNGSQNGLQLSGIYNIGKDTVRGAQITGLFN YAKELHGVQFGLVNITDSESGYSFGLLNFKKGGYKKISITSNEISDINLSIKTGDHKMYTILMAGASEQKEEEKMFSFGI GVGKSIPLGKRFTYNPEFSSQYLYLGNWDRYNSLSKFDSAFSFQLFKGLAISAGPSFNLYWSEKKDKNGSVNTSTFVQDR TKRYNIINNNSKDIIGWIGWSFGITLF >Mature_587_residues MLSNTKFIFAPILFLLISGVFFKVNAQSILDNEISVHADKKPLGSILDLMEEKGNFRFAYYSKLVVKDSVVSIHADKYTI KGVLDQLLSNKYEYKESPGFIIVRYAPLELALELEKNNSTSDGQQIVSGYIIDTQTNNRIENVSVLEKNVLQSTLTNKDG AFELRLKNAPQTIELTAVKENYKTVTMLFLSEIKIQMGNRKSTSDYIDGDFSAIERSGIGRFFISSKQKIQSLNLGGFIS KVPVQASLIPSISTRGMMNTQIVNNFSLNVLGGYNAGVRGLEMAGLYNINRMNVEALQMAGIFNTVGGSVNGLQLAGIYN NVFGNLNGLQISGIHNSVKGSQIGLQMSGIYNNVYKDSKGLQIAGIHNTVNGSQNGLQLSGIYNIGKDTVRGAQITGLFN YAKELHGVQFGLVNITDSESGYSFGLLNFKKGGYKKISITSNEISDINLSIKTGDHKMYTILMAGASEQKEEEKMFSFGI GVGKSIPLGKRFTYNPEFSSQYLYLGNWDRYNSLSKFDSAFSFQLFKGLAISAGPSFNLYWSEKKDKNGSVNTSTFVQDR TKRYNIINNNSKDIIGWIGWSFGITLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64895; Mature: 64895
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSNTKFIFAPILFLLISGVFFKVNAQSILDNEISVHADKKPLGSILDLMEEKGNFRFAY CCCCCCCHHHHHHHHHHCCEEEEEEHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEEEE YSKLVVKDSVVSIHADKYTIKGVLDQLLSNKYEYKESPGFIIVRYAPLELALELEKNNST EEEEEEECCEEEEECCCEEHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCCC SDGQQIVSGYIIDTQTNNRIENVSVLEKNVLQSTLTNKDGAFELRLKNAPQTIELTAVKE CCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECC NYKTVTMLFLSEIKIQMGNRKSTSDYIDGDFSAIERSGIGRFFISSKQKIQSLNLGGFIS CCCEEEEEEEEHHHEEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCHHHHHCCCCCCEE KVPVQASLIPSISTRGMMNTQIVNNFSLNVLGGYNAGVRGLEMAGLYNINRMNVEALQMA CCCCEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEECEEECCCCCHHHHHHH GIFNTVGGSVNGLQLAGIYNNVFGNLNGLQISGIHNSVKGSQIGLQMSGIYNNVYKDSKG HHHHHCCCCCCCEEEEEEHHHHCCCCCCEEEECCCCCCCCCEEEEEEECHHHHHHCCCCC LQIAGIHNTVNGSQNGLQLSGIYNIGKDTVRGAQITGLFNYAKELHGVQFGLVNITDSES CEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCEEEEEEEEECCCC GYSFGLLNFKKGGYKKISITSNEISDINLSIKTGDHKMYTILMAGASEQKEEEKMFSFGI CCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHCC GVGKSIPLGKRFTYNPEFSSQYLYLGNWDRYNSLSKFDSAFSFQLFKGLAISAGPSFNLY CCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCEEEECCCCEEEE WSEKKDKNGSVNTSTFVQDRTKRYNIINNNSKDIIGWIGWSFGITLF ECCCCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEEEEHCCCEEEC >Mature Secondary Structure MLSNTKFIFAPILFLLISGVFFKVNAQSILDNEISVHADKKPLGSILDLMEEKGNFRFAY CCCCCCCHHHHHHHHHHCCEEEEEEHHHHCCCCEEEEECCCHHHHHHHHHHHCCCEEEEE YSKLVVKDSVVSIHADKYTIKGVLDQLLSNKYEYKESPGFIIVRYAPLELALELEKNNST EEEEEEECCEEEEECCCEEHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEEEECCCCC SDGQQIVSGYIIDTQTNNRIENVSVLEKNVLQSTLTNKDGAFELRLKNAPQTIELTAVKE CCCHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEECC NYKTVTMLFLSEIKIQMGNRKSTSDYIDGDFSAIERSGIGRFFISSKQKIQSLNLGGFIS CCCEEEEEEEEHHHEEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCHHHHHCCCCCCEE KVPVQASLIPSISTRGMMNTQIVNNFSLNVLGGYNAGVRGLEMAGLYNINRMNVEALQMA CCCCEEEECCCCCCCCCEEEEEECCEEEEEEECCCCCCCCEEEECEEECCCCCHHHHHHH GIFNTVGGSVNGLQLAGIYNNVFGNLNGLQISGIHNSVKGSQIGLQMSGIYNNVYKDSKG HHHHHCCCCCCCEEEEEEHHHHCCCCCCEEEECCCCCCCCCEEEEEEECHHHHHHCCCCC LQIAGIHNTVNGSQNGLQLSGIYNIGKDTVRGAQITGLFNYAKELHGVQFGLVNITDSES CEEEEECCCCCCCCCCEEEEEEEECCCCCCCCEEEEHHHHHHHHHCCEEEEEEEEECCCC GYSFGLLNFKKGGYKKISITSNEISDINLSIKTGDHKMYTILMAGASEQKEEEKMFSFGI CCEEEEEEECCCCEEEEEEECCCCCEEEEEEEECCCEEEEEEEECCCCHHHHHHHHHHCC GVGKSIPLGKRFTYNPEFSSQYLYLGNWDRYNSLSKFDSAFSFQLFKGLAISAGPSFNLY CCCCCCCCCCEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCEEEECCCCEEEE WSEKKDKNGSVNTSTFVQDRTKRYNIINNNSKDIIGWIGWSFGITLF ECCCCCCCCCCCCHHHHHHHHHEEEEECCCCCEEEEEEEHCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA