| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146302514
Identifier: 146302514
GI number: 146302514
Start: 5784592
End: 5785794
Strand: Reverse
Name: 146302514
Synonym: Fjoh_4787
Alternate gene names: NA
Gene position: 5785794-5784592 (Counterclockwise)
Preceding gene: 146302516
Following gene: 146302510
Centisome position: 94.9
GC content: 34.83
Gene sequence:
>1203_bases ATGAAGTTTGGAATTATTAAAGAAAGAAAAAATCCGCCGGATAGAAGAGTTGTTTTTTCTCCTAATGAACTGACAAAATT AAAGCAGTCTTATCACGAAGCATCTGTTGAAGTAGAAAGCTCAGATATCAGGATATTCTCTGATGAAGCGTATAAAAATA TGGGAATAACGGTTACTGATGACATTTCGAACTGTGACGTTTTATTTGGAGTAAAAGAAGTTCCTGTAGAAAATTTAATT CCAAATAAAGCCTATTTTTTCTTTTCGCATACGATTAAAAAACAGCCTCATAACAGAAAATTACTTCAGGCAGTTTTAGA GAAAAATATTGATTTATACGATCACGAAACCATAGTTGATGCACATGATCATCGTTTAATTGGTTTTGGGAAATATGCCG GAATGGTAGGGGTTTACAACGGAATCCGTGCTTTTGGAATTAAGTTTGAATTGTTTAAACTGCCAAAAGCTGAATCTCTT TCAGGAAAAGATGCATTAATTGAGCAGCTGAAACGTATTACAATGCCTGCTTTAAAATTTGTAGTTACCGGAACTGGAAA AGTTGGGAGCGGAGCAAAAGAAATTCTCGATGCTATTAAAGTAAAAGAAATTACAGTTGATAATTATCTGACGAAAAAAT ATACACAAGCTGTATATGTTCAGTTAGATGTTTTGGAATATAATAAACGTCTTGACGGACAGGTTTTAGATTTTAAAGAT TTTGTCGAACATCCGCAAGAGTATACTTCAGATTTCGAGAAGTTTACAAAAGTGTCTGATATTTATTTTGCAGGGCATTT CCATGCAAATAACGCTCCAATGATTTTAACGAGAGAAATGCTGAACGCGAGCGATTGTAAATTAAAAGTTGTAGCCGATA TTTCCTGCGATGTAAACGGACCTATTGCCTGTACAATTCGTTCTTCGACAATTGAAGAACCTTTATACGGTTATTTTCCT TTTGAAGATAAAGAAGTTGATTTTTTTCATCCTGCAGCTGTTGCTGTTATGGCGGTTGATAACCTGCCGTGTGAAATTCC AAAAGACGCCAGCGAAGGTTTTGGTGAACAATTTATGGAACATGTTATTCCTGCTTTTTTCAACGGAGATAAAGACGGAA TTTTAAAACGTGCCAAAATCACTGAAAACGGGAAATTGACGGAGAGATTTAGCTATCTGCAAGACTATGTTAATAATGGT TAA
Upstream 100 bases:
>100_bases TAAATTACATTTTTGAAACAAAATTTTAACTATATTTGTTATATTTGAAACAAATAACCTTTAAAAAGTTATATTATTAA ACTATCAAAAACCTATTTAA
Downstream 100 bases:
>100_bases TTGTAAATTGTTAATTATAAATTGAAAACGAGCTTTCTAAATTTTAGAAAGCTCGTTTTTTTAATGATCATATAAGATAA TTAACAATTCACCATTAACA
Product: NAD(P) transhydrogenase subunit alpha
Products: L-lysine; 2-oxoglutarate; NADH; H+
Alternate protein names: Saccharopine Dehydrogenase; Alanine Dehydrogenase/PNT Domain Protein; NAD(P) Transhydrogenase Subunit Alpha; Alanine Dehydrogenase/Pnt Domain Protein; Monofunctional Lysine-Ketoglutarate Reductase; Alanine Dehydrogenase
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MKFGIIKERKNPPDRRVVFSPNELTKLKQSYHEASVEVESSDIRIFSDEAYKNMGITVTDDISNCDVLFGVKEVPVENLI PNKAYFFFSHTIKKQPHNRKLLQAVLEKNIDLYDHETIVDAHDHRLIGFGKYAGMVGVYNGIRAFGIKFELFKLPKAESL SGKDALIEQLKRITMPALKFVVTGTGKVGSGAKEILDAIKVKEITVDNYLTKKYTQAVYVQLDVLEYNKRLDGQVLDFKD FVEHPQEYTSDFEKFTKVSDIYFAGHFHANNAPMILTREMLNASDCKLKVVADISCDVNGPIACTIRSSTIEEPLYGYFP FEDKEVDFFHPAAVAVMAVDNLPCEIPKDASEGFGEQFMEHVIPAFFNGDKDGILKRAKITENGKLTERFSYLQDYVNNG
Sequences:
>Translated_400_residues MKFGIIKERKNPPDRRVVFSPNELTKLKQSYHEASVEVESSDIRIFSDEAYKNMGITVTDDISNCDVLFGVKEVPVENLI PNKAYFFFSHTIKKQPHNRKLLQAVLEKNIDLYDHETIVDAHDHRLIGFGKYAGMVGVYNGIRAFGIKFELFKLPKAESL SGKDALIEQLKRITMPALKFVVTGTGKVGSGAKEILDAIKVKEITVDNYLTKKYTQAVYVQLDVLEYNKRLDGQVLDFKD FVEHPQEYTSDFEKFTKVSDIYFAGHFHANNAPMILTREMLNASDCKLKVVADISCDVNGPIACTIRSSTIEEPLYGYFP FEDKEVDFFHPAAVAVMAVDNLPCEIPKDASEGFGEQFMEHVIPAFFNGDKDGILKRAKITENGKLTERFSYLQDYVNNG >Mature_400_residues MKFGIIKERKNPPDRRVVFSPNELTKLKQSYHEASVEVESSDIRIFSDEAYKNMGITVTDDISNCDVLFGVKEVPVENLI PNKAYFFFSHTIKKQPHNRKLLQAVLEKNIDLYDHETIVDAHDHRLIGFGKYAGMVGVYNGIRAFGIKFELFKLPKAESL SGKDALIEQLKRITMPALKFVVTGTGKVGSGAKEILDAIKVKEITVDNYLTKKYTQAVYVQLDVLEYNKRLDGQVLDFKD FVEHPQEYTSDFEKFTKVSDIYFAGHFHANNAPMILTREMLNASDCKLKVVADISCDVNGPIACTIRSSTIEEPLYGYFP FEDKEVDFFHPAAVAVMAVDNLPCEIPKDASEGFGEQFMEHVIPAFFNGDKDGILKRAKITENGKLTERFSYLQDYVNNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI13027640, Length=444, Percent_Identity=25.9009009009009, Blast_Score=146, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17541738, Length=443, Percent_Identity=27.313769751693, Blast_Score=151, Evalue=5e-37, Organism=Drosophila melanogaster, GI23397395, Length=443, Percent_Identity=29.3453724604966, Blast_Score=177, Evalue=2e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.5.1.7; 1.5.1.8; 1.5.1.9
Molecular weight: Translated: 45288; Mature: 45288
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFGIIKERKNPPDRRVVFSPNELTKLKQSYHEASVEVESSDIRIFSDEAYKNMGITVTD CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEEECCCEEEEECHHHCCCCCEEEC DISNCDVLFGVKEVPVENLIPNKAYFFFSHTIKKQPHNRKLLQAVLEKNIDLYDHETIVD CCCCCEEEECCHHCCHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEE AHDHRLIGFGKYAGMVGVYNGIRAFGIKFELFKLPKAESLSGKDALIEQLKRITMPALKF CCCCEEEEEHHHHCHHHHHCCHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEE VVTGTGKVGSGAKEILDAIKVKEITVDNYLTKKYTQAVYVQLDVLEYNKRLDGQVLDFKD EEECCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHCEEEEEEEEEEECCCCCCCEEECHHH FVEHPQEYTSDFEKFTKVSDIYFAGHFHANNAPMILTREMLNASDCKLKVVADISCDVNG HHCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEHHHCCCCCCEEEEEEEEECCCCC PIACTIRSSTIEEPLYGYFPFEDKEVDFFHPAAVAVMAVDNLPCEIPKDASEGFGEQFME CEEEEEECCCCCCCCCCCCCCCCCCCCEECHHHEEEEEECCCCCCCCCCHHHHHHHHHHH HVIPAFFNGDKDGILKRAKITENGKLTERFSYLQDYVNNG HHHHHHCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MKFGIIKERKNPPDRRVVFSPNELTKLKQSYHEASVEVESSDIRIFSDEAYKNMGITVTD CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCEEEECCCEEEEECHHHCCCCCEEEC DISNCDVLFGVKEVPVENLIPNKAYFFFSHTIKKQPHNRKLLQAVLEKNIDLYDHETIVD CCCCCEEEECCHHCCHHHCCCCCEEEEEEHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEE AHDHRLIGFGKYAGMVGVYNGIRAFGIKFELFKLPKAESLSGKDALIEQLKRITMPALKF CCCCEEEEEHHHHCHHHHHCCHHHHCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEE VVTGTGKVGSGAKEILDAIKVKEITVDNYLTKKYTQAVYVQLDVLEYNKRLDGQVLDFKD EEECCCCCCCCHHHHHHHHHHHEEEHHHHHHHHHCEEEEEEEEEEECCCCCCCEEECHHH FVEHPQEYTSDFEKFTKVSDIYFAGHFHANNAPMILTREMLNASDCKLKVVADISCDVNG HHCCHHHHHHHHHHHHHHHHEEEEEEEECCCCCEEEEHHHCCCCCCEEEEEEEEECCCCC PIACTIRSSTIEEPLYGYFPFEDKEVDFFHPAAVAVMAVDNLPCEIPKDASEGFGEQFME CEEEEEECCCCCCCCCCCCCCCCCCCCEECHHHEEEEEECCCCCCCCCCHHHHHHHHHHH HVIPAFFNGDKDGILKRAKITENGKLTERFSYLQDYVNNG HHHHHHCCCCHHHCEEEEEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: N6-(L-1,3-dicarboxypropyl)-L-lysine; NAD+; H2O
Specific reaction: N6-(L-1,3-dicarboxypropyl)-L-lysine + NAD+ + H2O = L-lysine + 2-oxoglutarate + NADH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA